RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 CCDC6Q16204 474 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 KRT71Q3SY84 523 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 GTDC1Q4AE62 458 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 ANKRD20A4Q4UJ75 823 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 ANKRD20A8PQ5CZ79 823 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 ANKRD20A2Q5SQ80 823 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 SPOUT1Q5T280 376 aaKnown RBP3.01□□□□□ -1.93
RFC4-211ENST00000460408 ANKRD20A1Q5TYW2 823 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 ANKRD20A3Q5VUR7 823 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 PRSS55Q6UWB4 352 aaPredicted RBP3.01□□□□□ -1.93
RFC4-211ENST00000460408 NOTCH2NLQ7Z3S9 236 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 PIWIL3Q7Z3Z3 882 aaKnown RBP3.01□□□□□ -1.93
RFC4-211ENST00000460408 AMIGO1Q86WK6 493 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 KLHDC8BQ8IXV7 354 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 AMER3Q8N944 861 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 UXS1Q8NBZ7 420 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 OR13C3Q8NGS6 347 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 OR1L3Q8NH93 324 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 FAM76AQ8TAV0 307 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.01□□□□□ -1.93
RFC4-211ENST00000460408 TSACCQ96A04 125 aaPredicted RBP3.01□□□□□ -1.93
RFC4-211ENST00000460408 LGALS12Q96DT0 336 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 PRAC1Q96KF2 57 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 C10orf90Q96M02 699 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 KLHL5Q96PQ7 755 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 PARK7Q99497 189 aaKnown RBP3.01□□□□□ -1.93
RFC4-211ENST00000460408 PANK2Q9BZ23 570 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 SDCBP2Q9H190 292 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 SNX25Q9H3E2 840 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 COPS7BQ9H9Q2 264 aaPredicted RBP3.01□□□□□ -1.93
RFC4-211ENST00000460408 RAVER2Q9HCJ3 691 aaKnown RBP3.01□□□□□ -1.93
RFC4-211ENST00000460408 TUFT1Q9NNX1 390 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 PKD2L2Q9NZM6 624 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 MAN1B1Q9UKM7 699 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 ITGA11Q9UKX5 1188 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 TNNQ9UQP3 1299 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 LIPT1Q9Y234 373 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 CHKBQ9Y259 395 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 KLK4Q9Y5K2 254 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 KIF26BQ2KJY2 2108 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 KIF21BO75037 1637 aa3.01□□□□□ -1.93
RFC4-211ENST00000460408 DNMBPQ6XZF7 1577 aa3□□□□□ -1.93
RFC4-211ENST00000460408 SRCAPQ6ZRS2 3230 aa3□□□□□ -1.93
RFC4-211ENST00000460408 FPGTO14772 594 aa3□□□□□ -1.93
RFC4-211ENST00000460408 TRMUO75648 421 aaKnown RBP3□□□□□ -1.93
RFC4-211ENST00000460408 KRT33AO76009 404 aa3□□□□□ -1.93
RFC4-211ENST00000460408 ANKRD34CP0C6C1 535 aa3□□□□□ -1.93
RFC4-211ENST00000460408 F3P13726 295 aa3□□□□□ -1.93
RFC4-211ENST00000460408 LHCGRP22888 699 aa3□□□□□ -1.93
RFC4-211ENST00000460408 ALDH4A1P30038 563 aa3□□□□□ -1.93
RFC4-211ENST00000460408 ALDH1B1P30837 517 aa3□□□□□ -1.93
RFC4-211ENST00000460408 HSPA1LP34931 641 aa3□□□□□ -1.93
RFC4-211ENST00000460408 MAP2K2P36507 400 aa3□□□□□ -1.93
RFC4-211ENST00000460408 SULT2A1Q06520 285 aa3□□□□□ -1.93
RFC4-211ENST00000460408 NFE2L1Q14494 772 aa3□□□□□ -1.93
RFC4-211ENST00000460408 ZNF876PQ49A33 203 aa3□□□□□ -1.93
RFC4-211ENST00000460408 LCE1FQ5T754 118 aa3□□□□□ -1.93
RFC4-211ENST00000460408 ARHGEF16Q5VV41 709 aa3□□□□□ -1.93
RFC4-211ENST00000460408 ZNF770Q6IQ21 691 aaPredicted RBP3□□□□□ -1.93
RFC4-211ENST00000460408 ZNF449Q6P9G9 518 aa3□□□□□ -1.93
RFC4-211ENST00000460408 ZNF790Q6PG37 636 aa3□□□□□ -1.93
RFC4-211ENST00000460408 PSRC1Q6PGN9 363 aaPredicted RBP3□□□□□ -1.93
RFC4-211ENST00000460408 SLC25A47Q6Q0C1 308 aa3□□□□□ -1.93
RFC4-211ENST00000460408 TMEM207Q6UWW9 146 aa3□□□□□ -1.93
RFC4-211ENST00000460408 LINC00696Q6ZRV3 163 aa3□□□□□ -1.93
RFC4-211ENST00000460408 G2E3Q7L622 706 aa3□□□□□ -1.93
RFC4-211ENST00000460408 CPEB2Q7Z5Q1 589 aaKnown RBP3□□□□□ -1.93
RFC4-211ENST00000460408 GPR141Q7Z602 305 aa3□□□□□ -1.93
RFC4-211ENST00000460408 DZIP1Q86YF9 867 aaKnown RBP3□□□□□ -1.93
RFC4-211ENST00000460408 CREBRFQ8IUR6 639 aa3□□□□□ -1.93
RFC4-211ENST00000460408 LRTM2Q8N967 370 aa3□□□□□ -1.93
RFC4-211ENST00000460408 CNBD1Q8NA66 436 aa3□□□□□ -1.93
RFC4-211ENST00000460408 DBF4BQ8NFT6 615 aa3□□□□□ -1.93
RFC4-211ENST00000460408 NCOA7Q8NI08 942 aa3□□□□□ -1.93
RFC4-211ENST00000460408 APOBEC4Q8WW27 367 aaKnown RBP3□□□□□ -1.93
RFC4-211ENST00000460408 PIK3R3Q92569 461 aa3□□□□□ -1.93
RFC4-211ENST00000460408 PGM2Q96G03 612 aa3□□□□□ -1.93
RFC4-211ENST00000460408 LITAFQ99732 161 aa3□□□□□ -1.93
RFC4-211ENST00000460408 PI4K2AQ9BTU6 479 aa3□□□□□ -1.93
RFC4-211ENST00000460408 CDK19Q9BWU1 502 aa3□□□□□ -1.93
RFC4-211ENST00000460408 ZNF696Q9H7X3 374 aa3□□□□□ -1.93
RFC4-211ENST00000460408 ARGLU1Q9NWB6 273 aaPredicted RBP3□□□□□ -1.93
RFC4-211ENST00000460408 TMEM181Q9P2C4 612 aa3□□□□□ -1.93
RFC4-211ENST00000460408 PPP2R2CQ9Y2T4 447 aa3□□□□□ -1.93
RFC4-211ENST00000460408 R4GN57 208 aa3□□□□□ -1.93
RFC4-211ENST00000460408 PLB1Q6P1J6 1458 aa3□□□□□ -1.93
RFC4-211ENST00000460408 GLI2P10070 1586 aa3□□□□□ -1.93
RFC4-211ENST00000460408 KIAA0586Q9BVV6 1533 aa2.99□□□□□ -1.93
RFC4-211ENST00000460408 IL16Q14005 1332 aa2.99□□□□□ -1.93
RFC4-211ENST00000460408 ADAMTSL3P82987 1691 aa2.99□□□□□ -1.93
RFC4-211ENST00000460408 IGHV4-4A0A075B6R2 117 aa2.99□□□□□ -1.93
RFC4-211ENST00000460408 A0A087X002 238 aa2.99□□□□□ -1.93
RFC4-211ENST00000460408 A0A0U1RQK1 487 aa2.99□□□□□ -1.93
RFC4-211ENST00000460408 ZNF320A2RRD8 509 aa2.99□□□□□ -1.93
RFC4-211ENST00000460408 MTMR11A4FU01 709 aa2.99□□□□□ -1.93
RFC4-211ENST00000460408 PRR23AA6NEV1 266 aa2.99□□□□□ -1.93
RFC4-211ENST00000460408 PRSS46E5RG02 174 aa2.99□□□□□ -1.93
RFC4-211ENST00000460408 TOM1O60784 492 aa2.99□□□□□ -1.93
RFC4-211ENST00000460408 CDC123O75794 336 aaPredicted RBP2.99□□□□□ -1.93
RFC4-211ENST00000460408 SEC24AO95486 1093 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms