RNA–Protein interactions for RNA: ENST00000458337.5

COMMD1-206, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-206ENST00000458337 FAM53BQ14153 422 aa12.7□□□□□ -0.38
COMMD1-206ENST00000458337 TSNQ15631 228 aaKnown RBP12.7□□□□□ -0.38
COMMD1-206ENST00000458337 NKG7Q16617 165 aa12.7□□□□□ -0.38
COMMD1-206ENST00000458337 HKDC1Q2TB90 917 aa12.7□□□□□ -0.38
COMMD1-206ENST00000458337 TCTN3Q6NUS6 607 aa12.7□□□□□ -0.38
COMMD1-206ENST00000458337 MED25Q71SY5 747 aa12.7□□□□□ -0.38
COMMD1-206ENST00000458337 VN1R4Q7Z5H5 301 aa12.7□□□□□ -0.38
COMMD1-206ENST00000458337 ADAMTSL2Q86TH1 951 aa12.7□□□□□ -0.38
COMMD1-206ENST00000458337 PLD3Q8IV08 490 aa12.7□□□□□ -0.38
COMMD1-206ENST00000458337 TMEM151BQ8IW70 566 aa12.7□□□□□ -0.38
COMMD1-206ENST00000458337 DTWD1Q8N5C7 304 aa12.7□□□□□ -0.38
COMMD1-206ENST00000458337 TMEM102Q8N9M5 508 aaPredicted RBP12.7□□□□□ -0.38
COMMD1-206ENST00000458337 RERGQ96A58 199 aaPredicted RBP12.7□□□□□ -0.38
COMMD1-206ENST00000458337 PYCR2Q96C36 320 aa12.7□□□□□ -0.38
COMMD1-206ENST00000458337 MLXIPLQ9NP71 852 aa12.7□□□□□ -0.38
COMMD1-206ENST00000458337 TLK1Q9UKI8 766 aa12.7□□□□□ -0.38
COMMD1-206ENST00000458337 CDC14AQ9UNH5 594 aa12.7□□□□□ -0.38
COMMD1-206ENST00000458337 RUVBL1Q9Y265 456 aaKnown RBP12.7□□□□□ -0.38
COMMD1-206ENST00000458337 PTRH2Q9Y3E5 179 aaKnown RBP12.7□□□□□ -0.38
COMMD1-206ENST00000458337 HMX2A2RU54 273 aa12.69□□□□□ -0.38
COMMD1-206ENST00000458337 PABPN1LA6NDY0 278 aaKnown RBP12.69□□□□□ -0.38
COMMD1-206ENST00000458337 NPEPPSL1A6NEC2 478 aa12.69□□□□□ -0.38
COMMD1-206ENST00000458337 MKRN2OSH3BPM6 223 aa12.69□□□□□ -0.38
COMMD1-206ENST00000458337 PHGDHO43175 533 aaKnown RBP12.69□□□□□ -0.38
COMMD1-206ENST00000458337 FOXS1O43638 330 aa12.69□□□□□ -0.38
COMMD1-206ENST00000458337 RFPL1O75677 317 aa12.69□□□□□ -0.38
COMMD1-206ENST00000458337 CDH1P12830 882 aa12.69□□□□□ -0.38
COMMD1-206ENST00000458337 CD1DP15813 335 aa12.69□□□□□ -0.38
COMMD1-206ENST00000458337 CRABP2P29373 138 aa12.69□□□□□ -0.38
COMMD1-206ENST00000458337 GGT5P36269 586 aa12.69□□□□□ -0.38
COMMD1-206ENST00000458337 FOLR3P41439 243 aa12.69□□□□□ -0.38
COMMD1-206ENST00000458337 CCR8P51685 355 aa12.69□□□□□ -0.38
COMMD1-206ENST00000458337 SLC9A5Q14940 896 aa12.69□□□□□ -0.38
COMMD1-206ENST00000458337 ADCK2Q7Z695 626 aa12.69□□□□□ -0.38
COMMD1-206ENST00000458337 RAB43Q86YS6 212 aa12.69□□□□□ -0.38
COMMD1-206ENST00000458337 C9orf43Q8TAL5 461 aaPredicted RBP12.69□□□□□ -0.38
COMMD1-206ENST00000458337 IFT81Q8WYA0 676 aa12.69□□□□□ -0.38
COMMD1-206ENST00000458337 KIAA1191Q96A73 305 aa12.69□□□□□ -0.38
COMMD1-206ENST00000458337 RHBDF1Q96CC6 855 aa12.69□□□□□ -0.38
COMMD1-206ENST00000458337 CABS1Q96KC9 395 aa12.69□□□□□ -0.38
COMMD1-206ENST00000458337 CYTH2Q99418 400 aa12.69□□□□□ -0.38
COMMD1-206ENST00000458337 SPSB2Q99619 263 aa12.69□□□□□ -0.38
COMMD1-206ENST00000458337 TRIM55Q9BYV6 548 aa12.69□□□□□ -0.38
COMMD1-206ENST00000458337 ING2Q9H160 280 aa12.69□□□□□ -0.38
COMMD1-206ENST00000458337 ACSS3Q9H6R3 686 aa12.69□□□□□ -0.38
COMMD1-206ENST00000458337 NINJ2Q9NZG7 142 aa12.69□□□□□ -0.38
COMMD1-206ENST00000458337 NXT1Q9UKK6 140 aaKnown RBP12.69□□□□□ -0.38
COMMD1-206ENST00000458337 PCSK5Q92824 1860 aa12.69□□□□□ -0.38
COMMD1-206ENST00000458337 ARGFXA6NJG6 315 aa12.68□□□□□ -0.38
COMMD1-206ENST00000458337 P2RX6O15547 441 aa12.68□□□□□ -0.38
COMMD1-206ENST00000458337 SUV39H1O43463 412 aa12.68□□□□□ -0.38
COMMD1-206ENST00000458337 IGHEP01854 428 aa12.68□□□□□ -0.38
COMMD1-206ENST00000458337 SLC35E2BP0CK96 405 aa12.68□□□□□ -0.38
COMMD1-206ENST00000458337 MMP11P24347 488 aa12.68□□□□□ -0.38
COMMD1-206ENST00000458337 PHBP35232 272 aa12.68□□□□□ -0.38
COMMD1-206ENST00000458337 BCL6P41182 706 aa12.68□□□□□ -0.38
COMMD1-206ENST00000458337 SLC6A12P48065 614 aa12.68□□□□□ -0.38
COMMD1-206ENST00000458337 KCNC1P48547 511 aa12.68□□□□□ -0.38
COMMD1-206ENST00000458337 NFATC3Q12968 1075 aa12.68□□□□□ -0.38
COMMD1-206ENST00000458337 ATP1A4Q13733 1029 aa12.68□□□□□ -0.38
COMMD1-206ENST00000458337 DSG2Q14126 1118 aa12.68□□□□□ -0.38
COMMD1-206ENST00000458337 TGFBIQ15582 683 aa12.68□□□□□ -0.38
COMMD1-206ENST00000458337 PPP1R32Q7Z5V6 425 aa12.68□□□□□ -0.38
COMMD1-206ENST00000458337 MRGPREQ86SM8 312 aa12.68□□□□□ -0.38
COMMD1-206ENST00000458337 ZNF605Q86T29 641 aa12.68□□□□□ -0.38
COMMD1-206ENST00000458337 ISCA2Q86U28 154 aa12.68□□□□□ -0.38
COMMD1-206ENST00000458337 THOC6Q86W42 341 aaKnown RBP12.68□□□□□ -0.38
COMMD1-206ENST00000458337 SPATA6LQ8N4H0 392 aa12.68□□□□□ -0.38
COMMD1-206ENST00000458337 MFSD9Q8NBP5 474 aa12.68□□□□□ -0.38
COMMD1-206ENST00000458337 NEIL2Q969S2 332 aa12.68□□□□□ -0.38
COMMD1-206ENST00000458337 ALKBH8Q96BT7 664 aaKnown RBP12.68□□□□□ -0.38
COMMD1-206ENST00000458337 FMO2Q99518 471 aa12.68□□□□□ -0.38
COMMD1-206ENST00000458337 TGIF2Q9GZN2 237 aa12.68□□□□□ -0.38
COMMD1-206ENST00000458337 SLC22A14Q9Y267 594 aa12.68□□□□□ -0.38
COMMD1-206ENST00000458337 PCDHGA9Q9Y5G4 932 aaKnown RBP12.68□□□□□ -0.38
COMMD1-206ENST00000458337 KCNE2Q9Y6J6 123 aa12.68□□□□□ -0.38
COMMD1-206ENST00000458337 MAU2Q9Y6X3 613 aa12.68□□□□□ -0.38
COMMD1-206ENST00000458337 BAHCC1Q9P281 2608 aa12.68□□□□□ -0.38
COMMD1-206ENST00000458337 TRBC2A0A5B9 178 aa12.67□□□□□ -0.38
COMMD1-206ENST00000458337 FEZF1A0PJY2 475 aa12.67□□□□□ -0.38
COMMD1-206ENST00000458337 K7EM74 188 aa12.67□□□□□ -0.38
COMMD1-206ENST00000458337 TAPBPO15533 448 aa12.67□□□□□ -0.38
COMMD1-206ENST00000458337 DNAJB5O75953 348 aa12.67□□□□□ -0.38
COMMD1-206ENST00000458337 ZGLP1P0C6A0 271 aa12.67□□□□□ -0.38
COMMD1-206ENST00000458337 OTX2P32243 289 aa12.67□□□□□ -0.38
COMMD1-206ENST00000458337 GRK3P35626 688 aa12.67□□□□□ -0.38
COMMD1-206ENST00000458337 CCL11P51671 97 aa12.67□□□□□ -0.38
COMMD1-206ENST00000458337 RRADP55042 308 aa12.67□□□□□ -0.38
COMMD1-206ENST00000458337 SOX8P57073 446 aa12.67□□□□□ -0.38
COMMD1-206ENST00000458337 FOXL2P58012 376 aa12.67□□□□□ -0.38
COMMD1-206ENST00000458337 SNRPNP63162 240 aaKnown RBP12.67□□□□□ -0.38
COMMD1-206ENST00000458337 DLG1Q12959 904 aa12.67□□□□□ -0.38
COMMD1-206ENST00000458337 CSHL1Q14406 222 aa12.67□□□□□ -0.38
COMMD1-206ENST00000458337 EFTUD2Q15029 972 aaKnown RBP eCLIP12.67□□□□□ -0.38
COMMD1-206ENST00000458337 OR4D1Q15615 310 aa12.67□□□□□ -0.38
COMMD1-206ENST00000458337 NDUFA9Q16795 377 aa12.67□□□□□ -0.38
COMMD1-206ENST00000458337 CATSPEREQ5SY80 951 aa12.67□□□□□ -0.38
COMMD1-206ENST00000458337 UBAP2Q5T6F2 1119 aaKnown RBP12.67□□□□□ -0.38
COMMD1-206ENST00000458337 CPZQ66K79 652 aa12.67□□□□□ -0.38
COMMD1-206ENST00000458337 TMEM214Q6NUQ4 689 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms