RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 C1orf52Q8N6N3 182 aaKnown RBP16.1■□□□□ 0.17
CCDC43-202ENST00000457422 ASB16Q96NS5 453 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 MUS81Q96NY9 551 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 SGPP1Q9BX95 441 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 TMEM245Q9H330 911 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 TRIM39Q9HCM9 518 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 BTNL2Q9UIR0 455 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 GPR34Q9UPC5 381 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 ERVK-11Q9UQG0 969 aa16.1■□□□□ 0.17
CCDC43-202ENST00000457422 COL4A3Q01955 1670 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 ZNF701M0R085 212 aaPredicted RBP16.09■□□□□ 0.17
CCDC43-202ENST00000457422 ENGP17813 658 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 DCTP40126 519 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 VAC14Q08AM6 782 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 BIRC2Q13490 618 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 PLCL1Q15111 1095 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 VMACQ2NL98 169 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 ANKRD26P1Q6NSI1 321 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 TMPRSS11BQ86T26 416 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 ZZZ3Q8IYH5 903 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 CHPFQ8IZ52 775 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 EFCAB11Q9BUY7 163 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 DUSP26Q9BV47 211 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 NPLQ9BXD5 320 aaPredicted RBP16.09■□□□□ 0.17
CCDC43-202ENST00000457422 TOR3AQ9H497 397 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 DPEP2Q9H4A9 486 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 EHD1Q9H4M9 534 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 PRM3Q9NNZ6 103 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 ITM2CQ9NQX7 267 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 PCDHB11Q9Y5F2 797 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 NUP214P35658 2090 aaPredicted RBP16.09■□□□□ 0.17
CCDC43-202ENST00000457422 HEPACAM2A8MVW5 462 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 FOXE1O00358 373 aaPredicted RBP16.09■□□□□ 0.17
CCDC43-202ENST00000457422 LZTS3O60299 673 aaPredicted RBP16.09■□□□□ 0.17
CCDC43-202ENST00000457422 KCNK5O95279 499 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 ANXA4P09525 319 aaPredicted RBP16.09■□□□□ 0.17
CCDC43-202ENST00000457422 LAMP1P11279 417 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 NPPBP16860 134 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 TIA1P31483 386 aaKnown RBP eCLIP16.09■□□□□ 0.17
CCDC43-202ENST00000457422 GTF2H3Q13889 308 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 ZNF234Q14588 700 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 TMEM259Q4ZIN3 620 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 HIPK1Q86Z02 1210 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 ZNF547Q8IVP9 402 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 LAS2Q8IYD9 372 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 LRRC56Q8IYG6 542 aaPredicted RBP16.09■□□□□ 0.17
CCDC43-202ENST00000457422 SYTL1Q8IYJ3 562 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 CLECL1Q8IZS7 167 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 HS3ST5Q8IZT8 346 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 CPA6Q8N4T0 437 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 LMNTD1Q8N9Z9 388 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 OR9A1PQ8NGU1 263 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 CXorf40BQ96DE9 158 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 ERLEC1Q96DZ1 483 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 MBOAT4Q96T53 435 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 SPATA9Q9BWV2 254 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 SMURF2Q9HAU4 748 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 DDX18Q9NVP1 670 aaKnown RBP16.09■□□□□ 0.17
CCDC43-202ENST00000457422 FAM118AQ9NWS6 357 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 ATXN10Q9UBB4 475 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 SH2B3Q9UQQ2 575 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 BTBD3Q9Y2F9 522 aa16.09■□□□□ 0.17
CCDC43-202ENST00000457422 YY2O15391 372 aa16.08■□□□□ 0.16
CCDC43-202ENST00000457422 VEGFDO43915 354 aa16.08■□□□□ 0.16
CCDC43-202ENST00000457422 TRMUO75648 421 aaKnown RBP16.08■□□□□ 0.16
CCDC43-202ENST00000457422 PCSK6P29122 969 aa16.08■□□□□ 0.16
CCDC43-202ENST00000457422 TTKP33981 857 aa16.08■□□□□ 0.16
CCDC43-202ENST00000457422 SHMT2P34897 504 aa16.08■□□□□ 0.16
CCDC43-202ENST00000457422 LRRC74AQ0VAA2 488 aa16.08■□□□□ 0.16
CCDC43-202ENST00000457422 CRTC3Q6UUV7 619 aa16.08■□□□□ 0.16
CCDC43-202ENST00000457422 SPESP1Q6UW49 350 aa16.08■□□□□ 0.16
CCDC43-202ENST00000457422 ZNF621Q6ZSS3 439 aa16.08■□□□□ 0.16
CCDC43-202ENST00000457422 ERN2Q76MJ5 926 aaKnown RBP16.08■□□□□ 0.16
CCDC43-202ENST00000457422 THAP5Q7Z6K1 395 aa16.08■□□□□ 0.16
CCDC43-202ENST00000457422 UBE2Q1Q7Z7E8 422 aa16.08■□□□□ 0.16
CCDC43-202ENST00000457422 TMEM179BQ7Z7N9 219 aa16.08■□□□□ 0.16
CCDC43-202ENST00000457422 PTOV1Q86YD1 416 aa16.08■□□□□ 0.16
CCDC43-202ENST00000457422 C7orf61Q8IZ16 206 aa16.08■□□□□ 0.16
CCDC43-202ENST00000457422 GPR156Q8NFN8 814 aa16.08■□□□□ 0.16
CCDC43-202ENST00000457422 OR10Q1Q8NGQ4 319 aa16.08■□□□□ 0.16
CCDC43-202ENST00000457422 SMARCD2Q92925 531 aa16.08■□□□□ 0.16
CCDC43-202ENST00000457422 COQ8BQ96D53 544 aa16.08■□□□□ 0.16
CCDC43-202ENST00000457422 IFT80Q9P2H3 777 aaPredicted RBP16.08■□□□□ 0.16
CCDC43-202ENST00000457422 DYRK1BQ9Y463 629 aa16.08■□□□□ 0.16
CCDC43-202ENST00000457422 ATG2AQ2TAZ0 1938 aa16.08■□□□□ 0.16
CCDC43-202ENST00000457422 GABRR3A8MPY1 467 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 CPSF4O95639 269 aaKnown RBP16.07■□□□□ 0.16
CCDC43-202ENST00000457422 SEMG1P04279 462 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 EFNA1P20827 205 aaPredicted RBP16.07■□□□□ 0.16
CCDC43-202ENST00000457422 IDSP22304 550 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 HPCAL1P37235 193 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 RPS13P62277 151 aaKnown RBP16.07■□□□□ 0.16
CCDC43-202ENST00000457422 TSTA3Q13630 321 aaPredicted RBP16.07■□□□□ 0.16
CCDC43-202ENST00000457422 VEZF1Q14119 521 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 CPTPQ5TA50 214 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 ANXA8L1Q5VT79 327 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 ZCCHC8Q6NZY4 707 aaKnown RBP16.07■□□□□ 0.16
CCDC43-202ENST00000457422 ERI1Q8IV48 349 aaKnown RBP16.07■□□□□ 0.16
CCDC43-202ENST00000457422 ZDHHC21Q8IVQ6 265 aa16.07■□□□□ 0.16
CCDC43-202ENST00000457422 C8orf59Q8N0T1 100 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms