RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 CSPG4P5Q96PW8 444 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 TRIB3Q96RU7 358 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 ZFYVE21Q9BQ24 234 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 TUBGCP2Q9BSJ2 902 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 TUBB6Q9BUF5 446 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 POLR1EQ9GZS1 481 aaKnown RBP2□□□□□ -2.09
NEDD1-204ENST00000457368 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2□□□□□ -2.09
NEDD1-204ENST00000457368 THAP2Q9H0W7 228 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 ZNF160Q9HCG1 818 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 DMRT3Q9NQL9 472 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 C14orf105Q9NVL8 296 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 GFOD1Q9NXC2 390 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 PLA2G3Q9NZ20 509 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 SH3BGRL2Q9UJC5 107 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 GNPTGQ9UJJ9 305 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 CFAP45Q9UL16 551 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 CBLCQ9ULV8 474 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 POLR3KQ9Y2Y1 108 aaPredicted RBP2□□□□□ -2.09
NEDD1-204ENST00000457368 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2□□□□□ -2.09
NEDD1-204ENST00000457368 ALG6Q9Y672 507 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 DOCK10Q96BY6 2186 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 A0A0J9YY10 115 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 C1orf232A0A0U1RR37 186 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 A0A1B0GVC2 190 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 NKX2-6A6NCS4 301 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 AGAP14A8MT82 685 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 NPIPA5E9PKD4 350 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 EEF2KO00418 725 aaKnown RBP2□□□□□ -2.09
NEDD1-204ENST00000457368 CLGNO14967 610 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 PRPF4O43172 522 aaKnown RBP eCLIP2□□□□□ -2.09
NEDD1-204ENST00000457368 CCP110O43303 1012 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 CBFA2T2O43439 604 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 SPRY1O43609 319 aaPredicted RBP2□□□□□ -2.09
NEDD1-204ENST00000457368 NME2P1O60361 137 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 SRPX2O60687 465 aaPredicted RBP2□□□□□ -2.09
NEDD1-204ENST00000457368 SUN1O94901 812 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 KRT3P12035 628 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 POLR2CP19387 275 aaPredicted RBP2□□□□□ -2.09
NEDD1-204ENST00000457368 TFEBP19484 476 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 PON1P27169 355 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 CYLC1P35663 651 aaPredicted RBP2□□□□□ -2.09
NEDD1-204ENST00000457368 ZFP36L2P47974 494 aaKnown RBP2□□□□□ -2.09
NEDD1-204ENST00000457368 ME1P48163 572 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 RAB28P51157 221 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 NUP107P57740 925 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 XRCC4Q13426 336 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 TUBA3CQ13748 450 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 BOP1Q14137 746 aaKnown RBP2□□□□□ -2.09
NEDD1-204ENST00000457368 KEAP1Q14145 624 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 GRM7Q14831 915 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 PTPRRQ15256 657 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 ZIC1Q15915 447 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 DPYSL2Q16555 572 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 EXOC3L4Q17RC7 722 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 DPY19L1Q2PZI1 675 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 FAM214AQ32MH5 1076 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 GLIPR1L2Q4G1C9 344 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 ZNF385BQ569K4 471 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 TDRD12Q587J7 1177 aaKnown RBP2□□□□□ -2.09
NEDD1-204ENST00000457368 EMC4Q5J8M3 183 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 Q5PR19 223 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 PLAG1Q6DJT9 500 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 SLC25A25Q6KCM7 469 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 TUBA3EQ6PEY2 450 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 WDR59Q6PJI9 974 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 CNSTQ6PJW8 725 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 SUSD1Q6UWL2 747 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 C16orf47Q6ZP98 133 aaPredicted RBP2□□□□□ -2.09
NEDD1-204ENST00000457368 SLC13A5Q86YT5 568 aaPredicted RBP2□□□□□ -2.09
NEDD1-204ENST00000457368 CILP2Q8IUL8 1156 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 CIARTQ8N365 385 aaPredicted RBP2□□□□□ -2.09
NEDD1-204ENST00000457368 HORMAD2Q8N7B1 307 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 FAM169BQ8N8A8 192 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 RASGEF1AQ8N9B8 481 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 FAM71BQ8TC56 605 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 NSMCE1Q8WV22 266 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 ROBO4Q8WZ75 1007 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 RNASE6Q93091 150 aaKnown RBP2□□□□□ -2.09
NEDD1-204ENST00000457368 MPP4Q96JB8 637 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 SIGLEC12Q96PQ1 595 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 OR2A14Q96R47 310 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 SH3GL2Q99962 352 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 CRB3Q9BUF7 120 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 UCK2Q9BZX2 261 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 TRABDQ9H4I3 376 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 PCDH9Q9HC56 1237 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 EURLQ9NYK6 297 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 UBP1Q9NZI7 540 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 DTLQ9NZJ0 730 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 OR6C2Q9NZP2 312 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 PTGFRNQ9P2B2 879 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 ZNF180Q9UJW8 692 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 NOCTQ9UK39 431 aaKnown RBP2□□□□□ -2.09
NEDD1-204ENST00000457368 DNAJC12Q9UKB3 198 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 NPIPA1Q9UND3 350 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 GTF3C1Q12789 2109 aa2□□□□□ -2.09
NEDD1-204ENST00000457368 CNTRLQ7Z7A1 2325 aa1.99□□□□□ -2.09
NEDD1-204ENST00000457368 TRAV20A0A0B4J274 112 aa1.99□□□□□ -2.09
NEDD1-204ENST00000457368 FAM90A27PA6NNH2 459 aa1.99□□□□□ -2.09
NEDD1-204ENST00000457368 USP27XA6NNY8 438 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms