RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 MAPK3P27361 379 aaPredicted RBP4.87□□□□□ -1.63
PCDH9-203ENST00000456367 AQP1P29972 269 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 CD79BP40259 229 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 DPP6P42658 865 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 MBTD1Q05BQ5 628 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 TARDBPQ13148 414 aaKnown RBP eCLIP4.87□□□□□ -1.63
PCDH9-203ENST00000456367 OCLNQ16625 522 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 CRB2Q5IJ48 1285 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 LRRC70Q7Z2Q7 622 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 LRP10Q7Z4F1 713 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 SVBPQ8N300 66 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 BEST4Q8NFU0 473 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 ADAMTS19Q8TE59 1207 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 ARL11Q969Q4 196 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 TESCQ96BS2 214 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 FCRL3Q96P31 734 aaPredicted RBP4.87□□□□□ -1.63
PCDH9-203ENST00000456367 PSKH2Q96QS6 385 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 LGR4Q9BXB1 951 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.87□□□□□ -1.63
PCDH9-203ENST00000456367 KANSL3Q9P2N6 904 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 MGAT4CQ9UBM8 478 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 MON2Q7Z3U7 1717 aa4.87□□□□□ -1.63
PCDH9-203ENST00000456367 TEX13CA0A0J9YWL9 993 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 ATP6V1G2-DDX39BF2Z307 99 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 DNAJB6O75190 326 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 GATBO75879 557 aaKnown RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 OAZ2O95190 189 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 C1RP00736 705 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 HIST1H2ABP04908 130 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 PROS1P07225 676 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 HK1P19367 917 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 FUT4P22083 530 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 TLX1P31314 330 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 RPL9P32969 192 aaKnown RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 EVI2BP34910 448 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 DCTP40126 519 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 AFF1P51825 1210 aaKnown RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 NUDT6P53370 316 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 SKP1P63208 163 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 MRPS10P82664 201 aaKnown RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 PCDH1Q08174 1060 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 IL10RBQ08334 325 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 LARS2Q15031 903 aaKnown RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 TAF1AQ15573 450 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 PLEKHN1Q494U1 663 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 C6orf136Q5SQH8 315 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 SYT6Q5T7P8 510 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 RPTNQ6XPR3 784 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 BRINP3Q76B58 766 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 HIST3H2AQ7L7L0 130 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 SLC51BQ86UW2 128 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 PLD6Q8N2A8 252 aaKnown RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 SYNPOQ8N3V7 929 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 HDDC3Q8N4P3 179 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 ZNF433Q8N7K0 673 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 ZFAND1Q8TCF1 268 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 FCAMRQ8WWV6 532 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 ING5Q8WYH8 240 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 HIST1H2ACQ93077 130 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 CMTM7Q96FZ5 175 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 CCDC120Q96HB5 630 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 FCRL2Q96LA5 508 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 UROC1Q96N76 676 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 ZNF599Q96NL3 588 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 BARD1Q99728 777 aaKnown RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 C17orf62Q9BQA9 187 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 C2orf49Q9BVC5 232 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 COMMD4Q9H0A8 199 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 OSBPL2Q9H1P3 480 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 IKZF4Q9H2S9 585 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 OR51J1Q9H342 316 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 EMC7Q9NPA0 242 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 ATP13A2Q9NQ11 1180 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 FAM86C1Q9NVL1 165 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 TRAV6A0A075B6T7 132 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 G3V2L1 256 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 M0R036 132 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 GPR25O00155 361 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 EIF3FO00303 357 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 FAAHO00519 579 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 ECI2O75521 394 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 PRAMEF12O95522 483 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 GOT2P00505 430 aaKnown RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 MT-ND5P03915 603 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 INSRRP14616 1297 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 PRKACGP22612 351 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 RPS12P25398 132 aaKnown RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 CXCR3P49682 368 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 GTF2A2P52657 109 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 OGDHQ02218 1023 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 AIMP2Q13155 320 aaKnown RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 BTG3Q14201 252 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 MAD2L1BPQ15013 274 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 BCL7AQ4VC05 210 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 RNASE12Q5GAN4 147 aaKnown RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 STEAP3Q658P3 488 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 TXNRD3NBQ6F5E7 133 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 CAPN13Q6MZZ7 669 aaPredicted RBP4.86□□□□□ -1.63
PCDH9-203ENST00000456367 ABHD15Q6UXT9 468 aa4.86□□□□□ -1.63
PCDH9-203ENST00000456367 GID4Q8IVV7 300 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms