RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 ARHGEF39Q8N4T4 335 aa17■□□□□ 0.31
MSH6-207ENST00000456246 RBMXL3Q8N7X1 1067 aaKnown RBP17■□□□□ 0.31
MSH6-207ENST00000456246 GALNT11Q8NCW6 608 aa17■□□□□ 0.31
MSH6-207ENST00000456246 ANKRD7Q92527 254 aa17■□□□□ 0.31
MSH6-207ENST00000456246 SGPP1Q9BX95 441 aa17■□□□□ 0.31
MSH6-207ENST00000456246 ZNF552Q9H707 407 aaPredicted RBP17■□□□□ 0.31
MSH6-207ENST00000456246 ARL15Q9NXU5 204 aa17■□□□□ 0.31
MSH6-207ENST00000456246 MOCS1Q9NZB8 636 aa17■□□□□ 0.31
MSH6-207ENST00000456246 WHRNQ9P202 907 aa17■□□□□ 0.31
MSH6-207ENST00000456246 SLC17A6Q9P2U8 582 aa17■□□□□ 0.31
MSH6-207ENST00000456246 TRPC4Q9UBN4 977 aa17■□□□□ 0.31
MSH6-207ENST00000456246 VPS4AQ9UN37 437 aa17■□□□□ 0.31
MSH6-207ENST00000456246 MAP4K5Q9Y4K4 846 aa17■□□□□ 0.31
MSH6-207ENST00000456246 PTPN13Q12923 2485 aa16.99■□□□□ 0.31
MSH6-207ENST00000456246 MAP2K7O14733 419 aa16.99■□□□□ 0.31
MSH6-207ENST00000456246 TP73O15350 636 aa16.99■□□□□ 0.31
MSH6-207ENST00000456246 EIF3HO15372 352 aaKnown RBP eCLIP16.99■□□□□ 0.312e-13■■■□□ 14.7
MSH6-207ENST00000456246 ACPPP15309 386 aa16.99■□□□□ 0.31
MSH6-207ENST00000456246 SLC26A3P40879 764 aa16.99■□□□□ 0.31
MSH6-207ENST00000456246 RPL21P46778 160 aaKnown RBP16.99■□□□□ 0.31
MSH6-207ENST00000456246 AVPR1BP47901 424 aa16.99■□□□□ 0.31
MSH6-207ENST00000456246 NAE1Q13564 534 aa16.99■□□□□ 0.31
MSH6-207ENST00000456246 RAPSNQ13702 412 aa16.99■□□□□ 0.31
MSH6-207ENST00000456246 DUPD1Q68J44 220 aa16.99■□□□□ 0.31
MSH6-207ENST00000456246 SHISA6Q6ZSJ9 500 aa16.99■□□□□ 0.31
MSH6-207ENST00000456246 ANKMY2Q8IV38 441 aa16.99■□□□□ 0.31
MSH6-207ENST00000456246 ZADH2Q8N4Q0 377 aa16.99■□□□□ 0.31
MSH6-207ENST00000456246 NKAPQ8N5F7 415 aaKnown RBP16.99■□□□□ 0.31
MSH6-207ENST00000456246 CAMKVQ8NCB2 501 aa16.99■□□□□ 0.31
MSH6-207ENST00000456246 SPATA4Q8NEY3 305 aa16.99■□□□□ 0.31
MSH6-207ENST00000456246 OR11G2Q8NGC1 345 aa16.99■□□□□ 0.31
MSH6-207ENST00000456246 MMABQ96EY8 250 aaPredicted RBP16.99■□□□□ 0.31
MSH6-207ENST00000456246 ERP44Q9BS26 406 aa16.99■□□□□ 0.31
MSH6-207ENST00000456246 TGIF2Q9GZN2 237 aa16.99■□□□□ 0.31
MSH6-207ENST00000456246 C3orf18Q9UK00 162 aa16.99■□□□□ 0.31
MSH6-207ENST00000456246 NOVA2Q9UNW9 492 aaKnown RBP16.99■□□□□ 0.31
MSH6-207ENST00000456246 B3GNT3Q9Y2A9 372 aa16.99■□□□□ 0.31
MSH6-207ENST00000456246 SNX24Q9Y343 169 aa16.99■□□□□ 0.31
MSH6-207ENST00000456246 H0YIG0 161 aa16.98■□□□□ 0.31
MSH6-207ENST00000456246 FANCGO15287 622 aa16.98■□□□□ 0.31
MSH6-207ENST00000456246 HPP00738 406 aa16.98■□□□□ 0.31
MSH6-207ENST00000456246 CYC1P08574 325 aa16.98■□□□□ 0.31
MSH6-207ENST00000456246 ZNF37AP17032 561 aaPredicted RBP16.98■□□□□ 0.31
MSH6-207ENST00000456246 CXCR2P25025 360 aa16.98■□□□□ 0.31
MSH6-207ENST00000456246 CASQ1P31415 396 aa16.98■□□□□ 0.31
MSH6-207ENST00000456246 CSNK1G2P78368 415 aa16.98■□□□□ 0.31
MSH6-207ENST00000456246 PHKG1Q16816 387 aa16.98■□□□□ 0.31
MSH6-207ENST00000456246 AGAP7PQ5VUJ5 663 aa16.98■□□□□ 0.31
MSH6-207ENST00000456246 ZC3HC1Q86WB0 502 aaKnown RBP16.98■□□□□ 0.31
MSH6-207ENST00000456246 ZBED8Q8IZ13 594 aa16.98■□□□□ 0.31
MSH6-207ENST00000456246 IQCKQ8N0W5 287 aa16.98■□□□□ 0.31
MSH6-207ENST00000456246 DTWD1Q8N5C7 304 aa16.98■□□□□ 0.31
MSH6-207ENST00000456246 TBC1D19Q8N5T2 526 aa16.98■□□□□ 0.31
MSH6-207ENST00000456246 OR56A3Q8NH54 315 aa16.98■□□□□ 0.31
MSH6-207ENST00000456246 FBXL8Q96CD0 374 aa16.98■□□□□ 0.31
MSH6-207ENST00000456246 VPS39Q96JC1 886 aa16.98■□□□□ 0.31
MSH6-207ENST00000456246 AGAP4Q96P64 663 aa16.98■□□□□ 0.31
MSH6-207ENST00000456246 OLFM1Q99784 485 aa16.98■□□□□ 0.31
MSH6-207ENST00000456246 SLC29A3Q9BZD2 475 aa16.98■□□□□ 0.31
MSH6-207ENST00000456246 LHPPQ9H008 270 aa16.98■□□□□ 0.31
MSH6-207ENST00000456246 ATG10Q9H0Y0 220 aa16.98■□□□□ 0.31
MSH6-207ENST00000456246 POPDC3Q9HBV1 291 aa16.98■□□□□ 0.31
MSH6-207ENST00000456246 A0A1W2PQ72 361 aa16.97■□□□□ 0.31
MSH6-207ENST00000456246 IDSB3KWA1 339 aa16.97■□□□□ 0.31
MSH6-207ENST00000456246 P2RX6O15547 441 aa16.97■□□□□ 0.31
MSH6-207ENST00000456246 FOXS1O43638 330 aa16.97■□□□□ 0.31
MSH6-207ENST00000456246 NSA2O95478 260 aaKnown RBP16.97■□□□□ 0.31
MSH6-207ENST00000456246 EMP2P54851 167 aa16.97■□□□□ 0.31
MSH6-207ENST00000456246 ETF1P62495 437 aaKnown RBP16.97■□□□□ 0.31
MSH6-207ENST00000456246 FASTKD3Q14CZ7 662 aaKnown RBP16.97■□□□□ 0.31
MSH6-207ENST00000456246 INPP5JQ15735 1006 aaPredicted RBP16.97■□□□□ 0.31
MSH6-207ENST00000456246 VWA2Q5GFL6 755 aa16.97■□□□□ 0.31
MSH6-207ENST00000456246 MBOAT1Q6ZNC8 495 aa16.97■□□□□ 0.31
MSH6-207ENST00000456246 STRA8Q7Z7C7 330 aa16.97■□□□□ 0.31
MSH6-207ENST00000456246 PLD3Q8IV08 490 aa16.97■□□□□ 0.31
MSH6-207ENST00000456246 SPNS2Q8IVW8 549 aa16.97■□□□□ 0.31
MSH6-207ENST00000456246 TMEM151BQ8IW70 566 aa16.97■□□□□ 0.31
MSH6-207ENST00000456246 AMER3Q8N944 861 aa16.97■□□□□ 0.31
MSH6-207ENST00000456246 ABHD11Q8NFV4 315 aa16.97■□□□□ 0.31
MSH6-207ENST00000456246 PYROXD1Q8WU10 500 aa16.97■□□□□ 0.31
MSH6-207ENST00000456246 CDKL2Q92772 493 aa16.97■□□□□ 0.31
MSH6-207ENST00000456246 YIPF2Q9BWQ6 316 aa16.97■□□□□ 0.31
MSH6-207ENST00000456246 MFRPQ9BY79 579 aa16.97■□□□□ 0.31
MSH6-207ENST00000456246 PHACTR1Q9C0D0 580 aa16.97■□□□□ 0.31
MSH6-207ENST00000456246 RHOJQ9H4E5 214 aa16.97■□□□□ 0.31
MSH6-207ENST00000456246 SYNPO2LQ9H987 977 aa16.97■□□□□ 0.31
MSH6-207ENST00000456246 HECTD1Q9ULT8 2610 aa16.96■□□□□ 0.31
MSH6-207ENST00000456246 A0A0A6YYC8 382 aaPredicted RBP16.96■□□□□ 0.31
MSH6-207ENST00000456246 FAM95CA0A1B0GW59 222 aa16.96■□□□□ 0.31
MSH6-207ENST00000456246 I3L1I5 382 aaPredicted RBP16.96■□□□□ 0.31
MSH6-207ENST00000456246 SLC35G6P0C7Q6 338 aa16.96■□□□□ 0.31
MSH6-207ENST00000456246 NPPBP16860 134 aa16.96■□□□□ 0.31
MSH6-207ENST00000456246 CCR8P51685 355 aa16.96■□□□□ 0.31
MSH6-207ENST00000456246 AP2B1P63010 937 aa16.96■□□□□ 0.31
MSH6-207ENST00000456246 ATG9BQ674R7 924 aa16.96■□□□□ 0.31
MSH6-207ENST00000456246 VN1R4Q7Z5H5 301 aa16.96■□□□□ 0.31
MSH6-207ENST00000456246 ASPGQ86U10 573 aa16.96■□□□□ 0.31
MSH6-207ENST00000456246 PRSS58Q8IYP2 241 aa16.96■□□□□ 0.31
MSH6-207ENST00000456246 Q8NA96 180 aa16.96■□□□□ 0.31
MSH6-207ENST00000456246 PPP4R1Q8TF05 950 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms