RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 PCDHB11Q9Y5F2 797 aa17.13■□□□□ 0.33
PTPN6-204ENST00000456013 PABPN1LA6NDY0 278 aaKnown RBP17.12■□□□□ 0.33
PTPN6-204ENST00000456013 NPIPB15A6NHN6 443 aaPredicted RBP17.12■□□□□ 0.33
PTPN6-204ENST00000456013 GFRA2O00451 464 aa17.12■□□□□ 0.33
PTPN6-204ENST00000456013 NUAK1O60285 661 aa17.12■□□□□ 0.33
PTPN6-204ENST00000456013 SERPINB1P30740 379 aa17.12■□□□□ 0.33
PTPN6-204ENST00000456013 KCNJ10P78508 379 aa17.12■□□□□ 0.33
PTPN6-204ENST00000456013 SMAD3P84022 425 aaKnown RBP17.12■□□□□ 0.33
PTPN6-204ENST00000456013 PLD1Q13393 1074 aa17.12■□□□□ 0.33
PTPN6-204ENST00000456013 TBCEQ15813 527 aaPredicted RBP17.12■□□□□ 0.33
PTPN6-204ENST00000456013 MLIPQ5VWP3 458 aa17.12■□□□□ 0.33
PTPN6-204ENST00000456013 CRTC1Q6UUV9 634 aa17.12■□□□□ 0.33
PTPN6-204ENST00000456013 CLECL1Q8IZS7 167 aa17.12■□□□□ 0.33
PTPN6-204ENST00000456013 TPD52L3Q96J77 140 aa17.12■□□□□ 0.33
PTPN6-204ENST00000456013 ZBTB20Q9HC78 741 aaPredicted RBP17.12■□□□□ 0.33
PTPN6-204ENST00000456013 PSORS1C1Q9UIG5 152 aa17.12■□□□□ 0.33
PTPN6-204ENST00000456013 UGT2A1Q9Y4X1 527 aa17.12■□□□□ 0.33
PTPN6-204ENST00000456013 A3GALT2U3KPV4 340 aa17.12■□□□□ 0.33
PTPN6-204ENST00000456013 M0R082 166 aa17.11■□□□□ 0.33
PTPN6-204ENST00000456013 MYO1DO94832 1006 aa17.11■□□□□ 0.33
PTPN6-204ENST00000456013 OR56A5P0C7T3 313 aa17.11■□□□□ 0.33
PTPN6-204ENST00000456013 MPC1LP0DKB6 136 aa17.11■□□□□ 0.33
PTPN6-204ENST00000456013 C21orf58P58505 322 aa17.11■□□□□ 0.33
PTPN6-204ENST00000456013 HSPA14Q0VDF9 509 aa17.11■□□□□ 0.33
PTPN6-204ENST00000456013 CSTF3Q12996 717 aaKnown RBP17.11■□□□□ 0.33
PTPN6-204ENST00000456013 BCL2A1Q16548 175 aa17.11■□□□□ 0.33
PTPN6-204ENST00000456013 ZNF181Q2M3W8 571 aa17.11■□□□□ 0.33
PTPN6-204ENST00000456013 RNF175Q8N4F7 328 aa17.11■□□□□ 0.33
PTPN6-204ENST00000456013 EFHD2Q96C19 240 aaPredicted RBP17.11■□□□□ 0.33
PTPN6-204ENST00000456013 TPT1P8Q9HAU6 139 aa17.11■□□□□ 0.33
PTPN6-204ENST00000456013 NMRK2Q9NPI5 230 aa17.11■□□□□ 0.33
PTPN6-204ENST00000456013 SLCO3A1Q9UIG8 710 aa17.11■□□□□ 0.33
PTPN6-204ENST00000456013 PCDHGB3Q9Y5G1 929 aa17.11■□□□□ 0.33
PTPN6-204ENST00000456013 AP1M2Q9Y6Q5 423 aa17.11■□□□□ 0.33
PTPN6-204ENST00000456013 THSD7BQ9C0I4 1608 aa17.11■□□□□ 0.33
PTPN6-204ENST00000456013 IGLV3-16A0A075B6K0 115 aa17.11■□□□□ 0.33
PTPN6-204ENST00000456013 SAGE2PA6NJ88 616 aa17.11■□□□□ 0.33
PTPN6-204ENST00000456013 PRKAR2AP13861 404 aaKnown RBP17.11■□□□□ 0.33
PTPN6-204ENST00000456013 PXNP49023 591 aaPredicted RBP17.11■□□□□ 0.33
PTPN6-204ENST00000456013 ZNF33BQ06732 778 aa17.11■□□□□ 0.33
PTPN6-204ENST00000456013 CHIT1Q13231 466 aa17.11■□□□□ 0.33
PTPN6-204ENST00000456013 ATP13A5Q4VNC0 1218 aa17.11■□□□□ 0.33
PTPN6-204ENST00000456013 PRSS36Q5K4E3 855 aa17.11■□□□□ 0.33
PTPN6-204ENST00000456013 TMEM53Q6P2H8 277 aa17.11■□□□□ 0.33
PTPN6-204ENST00000456013 RNF180Q86T96 592 aa17.11■□□□□ 0.33
PTPN6-204ENST00000456013 SKA2Q8WVK7 121 aaPredicted RBP17.11■□□□□ 0.33
PTPN6-204ENST00000456013 MYDGFQ969H8 173 aa17.11■□□□□ 0.33
PTPN6-204ENST00000456013 CHST8Q9H2A9 424 aa17.11■□□□□ 0.33
PTPN6-204ENST00000456013 LRFN2Q9ULH4 789 aa17.11■□□□□ 0.33
PTPN6-204ENST00000456013 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.11■□□□□ 0.33
PTPN6-204ENST00000456013 PADI2Q9Y2J8 665 aa17.11■□□□□ 0.33
PTPN6-204ENST00000456013 AGAP5A6NIR3 686 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 SLC16A5O15375 505 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 YY2O15391 372 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 IGSF6O95976 241 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 GGT2P36268 569 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 CTSKP43235 329 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 CRYBA2P53672 197 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 PRKCZQ05513 592 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 SELENBP1Q13228 472 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 SP140Q13342 867 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 TAF12Q16514 161 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 GPR153Q6NV75 609 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 TPRG1Q6ZUI0 275 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 USP43Q70EL4 1123 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 FAM124AQ86V42 546 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 BHMTQ93088 406 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 TRMT2BQ96GJ1 504 aaKnown RBP17.1■□□□□ 0.33
PTPN6-204ENST00000456013 P2RY13Q9BPV8 354 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 CEP44Q9C0F1 390 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 ABCB10Q9NRK6 738 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 ADPRHL2Q9NX46 363 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 GFYI3L273 518 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 SUV39H1O43463 412 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 GREM1O60565 184 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 RFPL2O75678 378 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 VIPP01282 170 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 PABPC1P11940 636 aaKnown RBP17.1■□□□□ 0.33
PTPN6-204ENST00000456013 ITPKAP23677 461 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 GADD45AP24522 165 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 SERPINA4P29622 427 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 C21orf33P30042 268 aaPredicted RBP17.1■□□□□ 0.33
PTPN6-204ENST00000456013 RRM2P31350 389 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 SEMG2Q02383 582 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 SLC13A2Q13183 592 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 TIGD6Q17RP2 521 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 LIPJQ5W064 366 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 VRK3Q8IV63 474 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 KCNC2Q96PR1 638 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 NXF2Q9GZY0 626 aaKnown RBP17.1■□□□□ 0.33
PTPN6-204ENST00000456013 FKBP14Q9NWM8 211 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 VPS29Q9UBQ0 182 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 FZD4Q9ULV1 537 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 RUVBL1Q9Y265 456 aaKnown RBP17.1■□□□□ 0.33
PTPN6-204ENST00000456013 BACE2Q9Y5Z0 518 aa17.1■□□□□ 0.33
PTPN6-204ENST00000456013 UPK3BL1B0FP48 263 aa17.09■□□□□ 0.33
PTPN6-204ENST00000456013 UPK3BL2E5RIL1 263 aa17.09■□□□□ 0.33
PTPN6-204ENST00000456013 UGDHO60701 494 aa17.09■□□□□ 0.33
PTPN6-204ENST00000456013 ZNF821O75541 412 aaPredicted RBP17.09■□□□□ 0.33
PTPN6-204ENST00000456013 CDK1P06493 297 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms