RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 CDX2Q99626 313 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 SH3GL2Q99962 352 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 CCDC77Q9BR77 488 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 NAT9Q9BTE0 207 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 FICDQ9BVA6 458 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 TRMT61BQ9BVS5 477 aaKnown RBP5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 ROPN1BQ9BZX4 212 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 IL22Q9GZX6 179 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 CLPBQ9H078 707 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 UBE2ZQ9H832 354 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 VPS37BQ9H9H4 285 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 ROPN1Q9HAT0 212 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 SYBUQ9NX95 663 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 ELOVL2Q9NXB9 296 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 BFARQ9NZS9 450 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 DEC1Q9P2X7 70 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 CROTQ9UKG9 612 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 CHMP2BQ9UQN3 213 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 MAD1L1Q9Y6D9 718 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 SESN1Q9Y6P5 492 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 TCF20Q9UGU0 1960 aaKnown RBP5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 TICRRQ7Z2Z1 1910 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 KIAA1549LQ6ZVL6 1849 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 A0A087WUV0 522 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 CCDC187A0A096LP49 1063 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 TCRBV9S1A1TA0A576 114 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 RASGRF2O14827 1237 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 SEC22BO75396 215 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 OR2C1O95371 312 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 SYF2O95926 243 aaKnown RBP5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 PNPP00491 289 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 C1QAP02745 245 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 SRPRAP08240 638 aaKnown RBP5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 DLDP09622 509 aaKnown RBP5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 C1SP09871 688 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 PGAM1P18669 254 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 DRD1P21728 446 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 SDHBP21912 280 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 KCNA5P22460 613 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 ADRA1DP25100 572 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 GDI1P31150 447 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 PHBP35232 272 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 OPRD1P41143 372 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 CLRN1P58418 232 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 AP1S1P61966 158 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 IFFO1Q0D2I5 559 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 C17orf67Q0P5P2 114 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 GPS2Q13227 327 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 FRG1Q14331 258 aaKnown RBP5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 PCOLCEQ15113 449 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 DLG2Q15700 870 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 SLC1A5Q15758 541 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 MYLK3Q32MK0 819 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 ITPRIPL2Q3MIP1 535 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 ANKRD20A4Q4UJ75 823 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 PCID2Q5JVF3 399 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 CEP85LQ5SZL2 805 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 NAIF1Q69YI7 327 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 CASC4Q6P4E1 433 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 WDR73Q6P4I2 378 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 CES3Q6UWW8 571 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 Q7L0L9 218 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 CROCCP2Q86T23 111 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 TMEM135Q86UB9 458 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 WFDC3Q8IUB2 231 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 SUN3Q8TAQ9 357 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 WFIKKN2Q8TEU8 576 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 SORCS1Q8WY21 1168 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 VOPP1Q96AW1 172 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 CFAP36Q96G28 342 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 PGAM5Q96HS1 289 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 FAR2Q96K12 515 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 KLHL15Q96M94 604 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 WDFY2Q96P53 400 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 TRIB3Q96RU7 358 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 RUFY1Q96T51 708 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 CYTH2Q99418 400 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 ATP6V0BQ99437 205 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 NAA11Q9BSU3 229 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 TUBB6Q9BUF5 446 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 KIFC1Q9BW19 673 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 FSD1LQ9BXM9 530 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 TMBIM4Q9HC24 238 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 MID1IP1Q9NPA3 183 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 MED4Q9NPJ6 270 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 CHRAC1Q9NRG0 131 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 SPATS2LQ9NUQ6 558 aaKnown RBP5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 GTSE1Q9NYZ3 720 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 SLC25A13Q9UJS0 675 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 ERVW-1Q9UQF0 538 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 CHKBQ9Y259 395 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 MRPS17Q9Y2R5 130 aaKnown RBP5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 RAI2Q9Y5P3 530 aa5.07□□□□□ -1.6
HMGB1P4-201ENST00000455362 LOC105369274A0A096LPK9 316 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 LOC102723532A0A0G2JNH3 316 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 ZCWPW2A0A1B0GU75 182 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 EXOC1LA0A1B0GW35 172 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 TRBC2A0A5B9 178 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 MROH6A6NGR9 719 aa5.06□□□□□ -1.6
HMGB1P4-201ENST00000455362 FAM159BA6NKW6 160 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms