RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 C21orf59P57076 290 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 DEFB103AP81534 67 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 BNIP3Q12983 259 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 TEAD4Q15561 434 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 CTF1Q16619 201 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 HKDC1Q2TB90 917 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 TBC1D25Q3MII6 688 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 MLIPQ5VWP3 458 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 ANKRD34AQ69YU3 496 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 ZCCHC8Q6NZY4 707 aaKnown RBP12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 AGTRAPQ6RW13 159 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 Q6ZVU0 165 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 CEP68Q76N32 757 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 ANKRD46Q86W74 232 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 TMEM25Q86YD3 366 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 PARP8Q8N3A8 854 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 KREMEN2Q8NCW0 462 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 ZFP90Q8TF47 636 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 IPCEF1Q8WWN9 437 aaPredicted RBP12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 IRF7Q92985 503 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 PYCR2Q96C36 320 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 YIPF6Q96EC8 236 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 HSPBAP1Q96EW2 488 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 MRGPRX3Q96LB0 322 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 APOL4Q9BPW4 351 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 CCM2Q9BSQ5 444 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 DUSP26Q9BV47 211 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 GABARAPL3Q9BY60 117 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 ASPSCR1Q9BZE9 553 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 EHD1Q9H4M9 534 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 SPHK2Q9NRA0 654 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 SLCO3A1Q9UIG8 710 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 FBXO10Q9UK96 956 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 BAG5Q9UL15 447 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 ERVK-11Q9UQG0 969 aa12.1□□□□□ -0.47
ECHDC1-209ENST00000454591 FADS2P1A8MWK0 482 aa12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 SLC22A1O15245 554 aa12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 PFDN1O60925 122 aa12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 ATG13O75143 517 aa12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 BCAS1O75363 584 aaPredicted RBP12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 B3GALT4O96024 378 aa12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 ADH1AP07327 375 aa12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 LINC00271P0C7V0 271 aa12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 IDSP22304 550 aa12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 ITPKAP23677 461 aa12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 PTX3P26022 381 aaPredicted RBP12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 HOXA9P31269 272 aa12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 WDR5P61964 334 aaKnown RBP12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 VLDLRP98155 873 aa12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 EMX1Q04741 257 aaPredicted RBP12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 TRIM60Q495X7 471 aa12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 BCL7AQ4VC05 210 aa12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 XKR6Q5GH73 641 aa12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 B3GNT8Q7Z7M8 397 aa12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 SVOPQ8N4V2 548 aa12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 VPS37AQ8NEZ2 397 aa12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 CHPT1Q8WUD6 406 aa12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 SGCDQ92629 289 aa12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 GLYATL1Q969I3 302 aa12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 REPS1Q96D71 796 aa12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 OR4K3Q96R72 315 aa12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 BHLHE41Q9C0J9 482 aaPredicted RBP12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 TPT1P8Q9HAU6 139 aa12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 PLCXD1Q9NUJ7 323 aa12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 ZNF282Q9UDV7 671 aaPredicted RBP12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 PCDHGA10Q9Y5H3 936 aa12.09□□□□□ -0.47
ECHDC1-209ENST00000454591 GABRR3A8MPY1 467 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 E7EQ34 232 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 YY2O15391 372 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 MOSPD3O75425 235 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 FGF18O76093 207 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 C9P02748 559 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 IMPA1P29218 277 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 CD6P30203 668 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 TIA1P31483 386 aaKnown RBP eCLIP12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 HPCAL1P37235 193 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 RPL3P39023 403 aaKnown RBP12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 MMP12P39900 470 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 SEMG2Q02383 582 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 RBBP4Q09028 425 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 AQP6Q13520 282 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 PDE7AQ13946 482 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 MAD2L1BPQ15013 274 aaPredicted RBP12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 ZNF77Q15935 545 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 ZNF284Q2VY69 593 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 PROX2Q3B8N5 592 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 SLC44A4Q53GD3 710 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 ZNF805Q5CZA5 627 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 CRTC3Q6UUV7 619 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 SLCO4C1Q6ZQN7 724 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 Q6ZVL8 140 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 CCDC80Q76M96 950 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 ZNF765Q7L2R6 523 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 PRSS48Q7RTY5 328 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 ZNF554Q86TJ5 538 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 NPAS3Q8IXF0 933 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 LAS2Q8IYD9 372 aa12.08□□□□□ -0.48
ECHDC1-209ENST00000454591 BPIFB6Q8NFQ5 453 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms