RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 OR1A2Q9Y585 309 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 PCDHGA8Q9Y5G5 932 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 PCDHGA11Q9Y5H2 935 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 FEZF1A0PJY2 475 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 ACP5P13686 325 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 PIGAP37287 484 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 HNMTP50135 292 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 CDH12P55289 794 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 GRIK2Q13002 908 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 Q6ZPB1 254 aaPredicted RBP11.57□□□□□ -0.56
SMPD4-213ENST00000454468 TCAIMQ8N3R3 496 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 CPXM2Q8N436 756 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 OR7G3Q8NG95 312 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 UBE2FQ969M7 185 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 CIDECQ96AQ7 238 aaPredicted RBP11.57□□□□□ -0.56
SMPD4-213ENST00000454468 OTULINQ96BN8 352 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 ISOC1Q96CN7 298 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 CMTM7Q96FZ5 175 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 PYURFQ96I23 114 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 YIPF4Q9BSR8 244 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 IMPAD1Q9NX62 359 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 SCN3BQ9NY72 215 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 SCHIP1Q9P0W5 487 aaPredicted RBP11.57□□□□□ -0.56
SMPD4-213ENST00000454468 TMPRSS11EQ9UL52 423 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 ABCG2Q9UNQ0 655 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 CEPT1Q9Y6K0 416 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 M0R129 80 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 PRR35P0CG20 571 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 ETFAP13804 333 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 RFX3P48380 749 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 CLCN2P51788 898 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 SPIBQ01892 262 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 DCTN2Q13561 401 aaKnown RBP11.57□□□□□ -0.56
SMPD4-213ENST00000454468 SLC36A3Q495N2 470 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 CBARPQ8N350 705 aaPredicted RBP11.57□□□□□ -0.56
SMPD4-213ENST00000454468 PIK3C3Q8NEB9 887 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 ZNF548Q8NEK5 533 aaPredicted RBP11.57□□□□□ -0.56
SMPD4-213ENST00000454468 OR8J3Q8NGG0 315 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 TOX2Q96NM4 488 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 BARD1Q99728 777 aaKnown RBP11.57□□□□□ -0.56
SMPD4-213ENST00000454468 RBM4BQ9BQ04 359 aaKnown RBP11.57□□□□□ -0.56
SMPD4-213ENST00000454468 RBM4Q9BWF3 364 aaKnown RBP11.57□□□□□ -0.56
SMPD4-213ENST00000454468 SLC29A3Q9BZD2 475 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 ZCCHC2Q9C0B9 1178 aaKnown RBP11.57□□□□□ -0.56
SMPD4-213ENST00000454468 RETREG1Q9H6L5 497 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 TM7SF3Q9NS93 570 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 THG1LQ9NWX6 298 aaKnown RBP11.57□□□□□ -0.56
SMPD4-213ENST00000454468 ADPRHL2Q9NX46 363 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 KCNK6Q9Y257 313 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 RUVBL1Q9Y265 456 aaKnown RBP11.57□□□□□ -0.56
SMPD4-213ENST00000454468 BTBD3Q9Y2F9 522 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 GPSM3Q9Y4H4 160 aa11.57□□□□□ -0.56
SMPD4-213ENST00000454468 LOC100130705A0A1B0GUX0 176 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 H7BY64 318 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 MAGEB3O15480 346 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 ETHE1O95571 254 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 ASLP04424 464 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 FABP3P05413 133 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 CBSLP0DN79 551 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 JUPP14923 745 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 PTNP21246 168 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 CBSP35520 551 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 BMPR1AP36894 532 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 CLK1P49759 484 aaKnown RBP11.56□□□□□ -0.56
SMPD4-213ENST00000454468 AP1S2P56377 157 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 FPGSQ05932 587 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 SMN1Q16637 294 aaKnown RBP11.56□□□□□ -0.56
SMPD4-213ENST00000454468 DUOXA1Q1HG43 343 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 RUNDC3AQ59EK9 446 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.56□□□□□ -0.56
SMPD4-213ENST00000454468 MPP7Q5T2T1 576 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 UTS2BQ765I0 119 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 RAB8BQ92930 207 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 COL26A1Q96A83 441 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 PRAP1Q96NZ9 151 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 MUC13Q9H3R2 512 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 CLMPQ9H6B4 373 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 DOLKQ9UPQ8 538 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 ANKRD36A6QL64 1941 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 URB1O60287 2271 aaKnown RBP11.56□□□□□ -0.56
SMPD4-213ENST00000454468 LOC100506127A0A0U1RQW1 187 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 PRRT4C9JH25 899 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 M0QX08 132 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 PRNPP04156 253 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 CA3P07451 260 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 C6P13671 934 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 ACPPP15309 386 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 AMD1P17707 334 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 MAP2K4P45985 399 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 CLCNKAP51800 687 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 COQ5Q5HYK3 327 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 PERM1Q5SV97 790 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 FAM9CQ8IZT9 166 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 OR5AR1Q8NGP9 310 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 DOK4Q8TEW6 326 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 ZFAND2BQ8WV99 257 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 RORBQ92753 470 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 TIFAQ96CG3 184 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 CEP295NLQ96MC4 621 aa11.56□□□□□ -0.56
SMPD4-213ENST00000454468 FERD3LQ96RJ6 166 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms