RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 EBPLQ9BY08 206 aa17.55■□□□□ 0.4
MECP2-205ENST00000453960 SOX17Q9H6I2 414 aaPredicted RBP17.55■□□□□ 0.4
MECP2-205ENST00000453960 ITM2CQ9NQX7 267 aa17.55■□□□□ 0.4
MECP2-205ENST00000453960 FAM118AQ9NWS6 357 aa17.55■□□□□ 0.4
MECP2-205ENST00000453960 ATP6V1HQ9UI12 483 aa17.55■□□□□ 0.4
MECP2-205ENST00000453960 BTBD3Q9Y2F9 522 aa17.55■□□□□ 0.4
MECP2-205ENST00000453960 PCDHB11Q9Y5F2 797 aa17.55■□□□□ 0.4
MECP2-205ENST00000453960 K7ESM1 405 aa17.54■□□□□ 0.4
MECP2-205ENST00000453960 CPNE6O95741 557 aa17.54■□□□□ 0.4
MECP2-205ENST00000453960 MYCLP1P12525 358 aaPredicted RBP17.54■□□□□ 0.4
MECP2-205ENST00000453960 ADRB3P13945 408 aa17.54■□□□□ 0.4
MECP2-205ENST00000453960 NPPBP16860 134 aa17.54■□□□□ 0.4
MECP2-205ENST00000453960 IDSP22304 550 aa17.54■□□□□ 0.4
MECP2-205ENST00000453960 PCSK6P29122 969 aa17.54■□□□□ 0.4
MECP2-205ENST00000453960 TIA1P31483 386 aaKnown RBP eCLIP17.54■□□□□ 0.48e-8■□□□□ 8.5
MECP2-205ENST00000453960 SHMT2P34897 504 aa17.54■□□□□ 0.4
MECP2-205ENST00000453960 VIPR2P41587 438 aa17.54■□□□□ 0.4
MECP2-205ENST00000453960 SLC6A11P48066 632 aa17.54■□□□□ 0.4
MECP2-205ENST00000453960 CAPN13Q6MZZ7 669 aaPredicted RBP17.54■□□□□ 0.4
MECP2-205ENST00000453960 MED27Q6P2C8 311 aa17.54■□□□□ 0.4
MECP2-205ENST00000453960 ERN2Q76MJ5 926 aaKnown RBP17.54■□□□□ 0.4
MECP2-205ENST00000453960 HIPK1Q86Z02 1210 aa17.54■□□□□ 0.4
MECP2-205ENST00000453960 OR9A1PQ8NGU1 263 aa17.54■□□□□ 0.4
MECP2-205ENST00000453960 GOT1L1Q8NHS2 421 aaPredicted RBP17.54■□□□□ 0.4
MECP2-205ENST00000453960 SMG7Q92540 1137 aaKnown RBP17.54■□□□□ 0.4
MECP2-205ENST00000453960 SDCCAG3Q96C92 435 aa17.54■□□□□ 0.4
MECP2-205ENST00000453960 PANX1Q96RD7 426 aa17.54■□□□□ 0.4
MECP2-205ENST00000453960 TUBA1CQ9BQE3 449 aa17.54■□□□□ 0.4
MECP2-205ENST00000453960 EFCAB11Q9BUY7 163 aa17.54■□□□□ 0.4
MECP2-205ENST00000453960 TOR3AQ9H497 397 aa17.54■□□□□ 0.4
MECP2-205ENST00000453960 TRPV4Q9HBA0 871 aa17.54■□□□□ 0.4
MECP2-205ENST00000453960 IL1RAPQ9NPH3 570 aa17.54■□□□□ 0.4
MECP2-205ENST00000453960 IFT80Q9P2H3 777 aaPredicted RBP17.54■□□□□ 0.4
MECP2-205ENST00000453960 DEC1Q9P2X7 70 aa17.54■□□□□ 0.4
MECP2-205ENST00000453960 CHD9Q3L8U1 2897 aa17.54■□□□□ 0.4
MECP2-205ENST00000453960 OTOL1A6NHN0 477 aaPredicted RBP17.53■□□□□ 0.4
MECP2-205ENST00000453960 SLC16A6O15403 523 aa17.53■□□□□ 0.4
MECP2-205ENST00000453960 VEGFDO43915 354 aa17.53■□□□□ 0.4
MECP2-205ENST00000453960 TRMUO75648 421 aaKnown RBP17.53■□□□□ 0.4
MECP2-205ENST00000453960 EPN2O95208 641 aa17.53■□□□□ 0.4
MECP2-205ENST00000453960 LAMP1P11279 417 aa17.53■□□□□ 0.4
MECP2-205ENST00000453960 COX7A2P14406 83 aa17.53■□□□□ 0.4
MECP2-205ENST00000453960 ENGP17813 658 aa17.53■□□□□ 0.4
MECP2-205ENST00000453960 TBPL1P62380 186 aa17.53■□□□□ 0.4
MECP2-205ENST00000453960 RFX4Q33E94 735 aa17.53■□□□□ 0.4
MECP2-205ENST00000453960 FAM78AQ5JUQ0 283 aa17.53■□□□□ 0.4
MECP2-205ENST00000453960 RBM48Q5RL73 367 aaKnown RBP17.53■□□□□ 0.4
MECP2-205ENST00000453960 SHQ1Q6PI26 577 aaKnown RBP17.53■□□□□ 0.4
MECP2-205ENST00000453960 THAP5Q7Z6K1 395 aa17.53■□□□□ 0.4
MECP2-205ENST00000453960 C11orf96Q7Z7L8 435 aa17.53■□□□□ 0.4
MECP2-205ENST00000453960 TMEM179BQ7Z7N9 219 aa17.53■□□□□ 0.4
MECP2-205ENST00000453960 NPAS3Q8IXF0 933 aa17.53■□□□□ 0.4
MECP2-205ENST00000453960 CLEC4FQ8N1N0 589 aa17.53■□□□□ 0.4
MECP2-205ENST00000453960 SYNPOQ8N3V7 929 aa17.53■□□□□ 0.4
MECP2-205ENST00000453960 C1orf52Q8N6N3 182 aaKnown RBP17.53■□□□□ 0.4
MECP2-205ENST00000453960 OR2L2Q8NH16 312 aa17.53■□□□□ 0.4
MECP2-205ENST00000453960 FBLIM1Q8WUP2 373 aa17.53■□□□□ 0.4
MECP2-205ENST00000453960 NCLNQ969V3 563 aa17.53■□□□□ 0.4
MECP2-205ENST00000453960 MED8Q96G25 268 aa17.53■□□□□ 0.4
MECP2-205ENST00000453960 COX14Q96I36 57 aa17.53■□□□□ 0.4
MECP2-205ENST00000453960 DUSP26Q9BV47 211 aa17.53■□□□□ 0.4
MECP2-205ENST00000453960 HDAC8Q9BY41 377 aa17.53■□□□□ 0.4
MECP2-205ENST00000453960 AMBRA1Q9C0C7 1298 aa17.53■□□□□ 0.4
MECP2-205ENST00000453960 ATXN10Q9UBB4 475 aa17.53■□□□□ 0.4
MECP2-205ENST00000453960 TMEFF2Q9UIK5 374 aaPredicted RBP17.53■□□□□ 0.4
MECP2-205ENST00000453960 EXO1Q9UQ84 846 aaKnown RBP17.53■□□□□ 0.4
MECP2-205ENST00000453960 COQ6Q9Y2Z9 468 aa17.53■□□□□ 0.4
MECP2-205ENST00000453960 GABRR3A8MPY1 467 aa17.52■□□□□ 0.4
MECP2-205ENST00000453960 PPIBP23284 216 aaKnown RBP17.52■□□□□ 0.4
MECP2-205ENST00000453960 IST1P53990 364 aa17.52■□□□□ 0.4
MECP2-205ENST00000453960 ESRRGP62508 458 aa17.52■□□□□ 0.4
MECP2-205ENST00000453960 ANXA8L1Q5VT79 327 aa17.52■□□□□ 0.4
MECP2-205ENST00000453960 ZNF773Q6PK81 442 aa17.52■□□□□ 0.4
MECP2-205ENST00000453960 UNC5DQ6UXZ4 953 aa17.52■□□□□ 0.4
MECP2-205ENST00000453960 CBLL1Q75N03 491 aa17.52■□□□□ 0.4
MECP2-205ENST00000453960 LPCAT2Q7L5N7 544 aa17.52■□□□□ 0.4
MECP2-205ENST00000453960 PIWIL3Q7Z3Z3 882 aaKnown RBP17.52■□□□□ 0.4
MECP2-205ENST00000453960 GPR141Q7Z602 305 aa17.52■□□□□ 0.4
MECP2-205ENST00000453960 ZNF420Q8TAQ5 688 aaPredicted RBP17.52■□□□□ 0.4
MECP2-205ENST00000453960 HDAC2Q92769 488 aaKnown RBP17.52■□□□□ 0.4
MECP2-205ENST00000453960 SMARCD2Q92925 531 aa17.52■□□□□ 0.4
MECP2-205ENST00000453960 GFM2Q969S9 779 aaKnown RBP17.52■□□□□ 0.4
MECP2-205ENST00000453960 PPP1R16AQ96I34 528 aa17.52■□□□□ 0.4
MECP2-205ENST00000453960 RNASET2O00584 256 aaKnown RBP17.52■□□□□ 0.39
MECP2-205ENST00000453960 C1QCP02747 245 aa17.52■□□□□ 0.39
MECP2-205ENST00000453960 C1GALT1C1LP0DN25 315 aa17.52■□□□□ 0.39
MECP2-205ENST00000453960 KDELR2P33947 212 aa17.52■□□□□ 0.39
MECP2-205ENST00000453960 GPR1P46091 355 aa17.52■□□□□ 0.39
MECP2-205ENST00000453960 TAP2Q03519 686 aa17.52■□□□□ 0.39
MECP2-205ENST00000453960 GRSF1Q12849 480 aaKnown RBP eCLIP17.52■□□□□ 0.39
MECP2-205ENST00000453960 IL18R1Q13478 541 aa17.52■□□□□ 0.39
MECP2-205ENST00000453960 PDE7AQ13946 482 aa17.52■□□□□ 0.39
MECP2-205ENST00000453960 ZNF234Q14588 700 aa17.52■□□□□ 0.39
MECP2-205ENST00000453960 FNDC3BQ53EP0 1204 aaKnown RBP17.52■□□□□ 0.39
MECP2-205ENST00000453960 ADNP2Q6IQ32 1131 aa17.52■□□□□ 0.39
MECP2-205ENST00000453960 EIF3MQ7L2H7 374 aaKnown RBP17.52■□□□□ 0.39
MECP2-205ENST00000453960 CFAP206Q8IYR0 622 aa17.52■□□□□ 0.39
MECP2-205ENST00000453960 SETD7Q8WTS6 366 aaKnown RBP17.52■□□□□ 0.39
MECP2-205ENST00000453960 RAB7BQ96AH8 199 aa17.52■□□□□ 0.39
MECP2-205ENST00000453960 NRBF2Q96F24 287 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms