RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 C21orf140B9A014 251 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 TK2O00142 265 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 ZSCAN9O15535 394 aaPredicted RBP14.03□□□□□ -0.16
VPS16-205ENST00000453689 KATNA1O75449 491 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 SUPT3HO75486 399 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 CCNDBP1O95273 360 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 KLK3P07288 261 aaPredicted RBP14.03□□□□□ -0.16
VPS16-205ENST00000453689 HBQ1P09105 142 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 KCNC1P48547 511 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 HNMTP50135 292 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 TBPL1P62380 186 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 PRDX1Q06830 199 aaKnown RBP14.03□□□□□ -0.16
VPS16-205ENST00000453689 COL9A2Q14055 689 aaPredicted RBP14.03□□□□□ -0.16
VPS16-205ENST00000453689 NAA25Q14CX7 972 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 PTCHD3Q3KNS1 767 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 THEMIS2Q5TEJ8 643 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 AGBL2Q5U5Z8 902 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 ZNF385CQ66K41 422 aaPredicted RBP14.03□□□□□ -0.16
VPS16-205ENST00000453689 C16orf46Q6P387 395 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 TLDC1Q6P9B6 456 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 AGTRAPQ6RW13 159 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 RNF44Q7L0R7 432 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 EXOC3L1Q86VI1 746 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 TCAIMQ8N3R3 496 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 ZNF655Q8N720 491 aaPredicted RBP14.03□□□□□ -0.16
VPS16-205ENST00000453689 GOLGA6L1Q8N7Z2 621 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 MR1Q95460 341 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 RHBDF1Q96CC6 855 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 BBC3Q96PG8 261 aaPredicted RBP14.03□□□□□ -0.16
VPS16-205ENST00000453689 SH3GL2Q99962 352 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 PLCD4Q9BRC7 762 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 IQCGQ9H095 443 aaKnown RBP14.03□□□□□ -0.16
VPS16-205ENST00000453689 CHST8Q9H2A9 424 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 CCDC177Q9NQR7 707 aaPredicted RBP14.03□□□□□ -0.16
VPS16-205ENST00000453689 IRAK4Q9NWZ3 460 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 CD274Q9NZQ7 290 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 ANKMY1Q9P2S6 941 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 KCND3Q9UK17 655 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 TMCO1Q9UM00 188 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 PCDHGA6Q9Y5G7 932 aa14.03□□□□□ -0.16
VPS16-205ENST00000453689 NCF1BA6NI72 391 aaPredicted RBP14.02□□□□□ -0.17
VPS16-205ENST00000453689 NCF1CA8MVU1 366 aaPredicted RBP14.02□□□□□ -0.17
VPS16-205ENST00000453689 ERVH48-1M5A8F1 160 aa14.02□□□□□ -0.17
VPS16-205ENST00000453689 UBXN8O00124 270 aa14.02□□□□□ -0.17
VPS16-205ENST00000453689 NKX2-8O15522 239 aa14.02□□□□□ -0.17
VPS16-205ENST00000453689 PRKAR1AP10644 381 aa14.02□□□□□ -0.17
VPS16-205ENST00000453689 MTHFD2P13995 350 aa14.02□□□□□ -0.17
VPS16-205ENST00000453689 NCF1P14598 390 aaPredicted RBP14.02□□□□□ -0.17
VPS16-205ENST00000453689 CREB1P16220 341 aa14.02□□□□□ -0.17
VPS16-205ENST00000453689 GCGRP47871 477 aa14.02□□□□□ -0.17
VPS16-205ENST00000453689 CDC20Q12834 499 aa14.02□□□□□ -0.17
VPS16-205ENST00000453689 CCDC153Q494R4 210 aa14.02□□□□□ -0.17
VPS16-205ENST00000453689 PRAMEF13Q5VWM6 474 aa14.02□□□□□ -0.17
VPS16-205ENST00000453689 SULT1C3Q6IMI6 304 aa14.02□□□□□ -0.17
VPS16-205ENST00000453689 FRMPD2BQ6IN97 320 aa14.02□□□□□ -0.17
VPS16-205ENST00000453689 ZNF425Q6IV72 752 aa14.02□□□□□ -0.17
VPS16-205ENST00000453689 RHBDD2Q6NTF9 364 aa14.02□□□□□ -0.17
VPS16-205ENST00000453689 PCSK4Q6UW60 755 aa14.02□□□□□ -0.17
VPS16-205ENST00000453689 PAQR7Q86WK9 346 aa14.02□□□□□ -0.17
VPS16-205ENST00000453689 TLCD1Q96CP7 247 aa14.02□□□□□ -0.17
VPS16-205ENST00000453689 MED8Q96G25 268 aa14.02□□□□□ -0.17
VPS16-205ENST00000453689 ZNF285Q96NJ3 590 aa14.02□□□□□ -0.17
VPS16-205ENST00000453689 SELENOSQ9BQE4 189 aa14.02□□□□□ -0.17
VPS16-205ENST00000453689 ATG10Q9H0Y0 220 aa14.02□□□□□ -0.17
VPS16-205ENST00000453689 ACTL8Q9H568 366 aa14.02□□□□□ -0.17
VPS16-205ENST00000453689 SSU72Q9NP77 194 aaKnown RBP14.02□□□□□ -0.17
VPS16-205ENST00000453689 STARD5Q9NSY2 213 aa14.02□□□□□ -0.17
VPS16-205ENST00000453689 WWOXQ9NZC7 414 aa14.02□□□□□ -0.17
VPS16-205ENST00000453689 CPSF2Q9P2I0 782 aaKnown RBP14.02□□□□□ -0.17
VPS16-205ENST00000453689 DHCR7Q9UBM7 475 aaKnown RBP14.02□□□□□ -0.17
VPS16-205ENST00000453689 EMCNQ9ULC0 261 aa14.02□□□□□ -0.17
VPS16-205ENST00000453689 SRPK3Q9UPE1 567 aa14.02□□□□□ -0.17
VPS16-205ENST00000453689 ATMQ13315 3056 aa14.02□□□□□ -0.17
VPS16-205ENST00000453689 SCN2AQ99250 2005 aa14.02□□□□□ -0.17
VPS16-205ENST00000453689 MED13Q9UHV7 2174 aa14.01□□□□□ -0.17
VPS16-205ENST00000453689 LOC105369274A0A096LPK9 316 aa14.01□□□□□ -0.17
VPS16-205ENST00000453689 LOC102723532A0A0G2JNH3 316 aa14.01□□□□□ -0.17
VPS16-205ENST00000453689 A0A0J9YVX5 310 aa14.01□□□□□ -0.17
VPS16-205ENST00000453689 ATXN7O15265 892 aaPredicted RBP14.01□□□□□ -0.17
VPS16-205ENST00000453689 ATP8B1O43520 1251 aa14.01□□□□□ -0.17
VPS16-205ENST00000453689 TYROBPO43914 113 aa14.01□□□□□ -0.17
VPS16-205ENST00000453689 KLK8O60259 260 aa14.01□□□□□ -0.17
VPS16-205ENST00000453689 PLIN3O60664 434 aa14.01□□□□□ -0.17
VPS16-205ENST00000453689 SMIM24O75264 130 aa14.01□□□□□ -0.17
VPS16-205ENST00000453689 SPAG7O75391 227 aa14.01□□□□□ -0.17
VPS16-205ENST00000453689 IPO13O94829 963 aaKnown RBP14.01□□□□□ -0.17
VPS16-205ENST00000453689 PROCP04070 461 aa14.01□□□□□ -0.17
VPS16-205ENST00000453689 CAPN1P07384 714 aa14.01□□□□□ -0.17
VPS16-205ENST00000453689 GFAPP14136 432 aa14.01□□□□□ -0.17
VPS16-205ENST00000453689 TAC1P20366 129 aa14.01□□□□□ -0.17
VPS16-205ENST00000453689 CCND1P24385 295 aa14.01□□□□□ -0.17
VPS16-205ENST00000453689 PTPN4P29074 926 aa14.01□□□□□ -0.17
VPS16-205ENST00000453689 VSX2P58304 361 aaPredicted RBP14.01□□□□□ -0.17
VPS16-205ENST00000453689 RPS18P62269 152 aaKnown RBP14.01□□□□□ -0.17
VPS16-205ENST00000453689 ABATP80404 500 aa14.01□□□□□ -0.17
VPS16-205ENST00000453689 NAE1Q13564 534 aa14.01□□□□□ -0.17
VPS16-205ENST00000453689 ZXDCQ2QGD7 858 aaPredicted RBP14.01□□□□□ -0.17
VPS16-205ENST00000453689 CRTC2Q53ET0 693 aaPredicted RBP14.01□□□□□ -0.17
VPS16-205ENST00000453689 SOWAHCQ53LP3 525 aaPredicted RBP14.01□□□□□ -0.17
VPS16-205ENST00000453689 TCTE1Q5JU00 501 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms