RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 IQCKQ8N0W5 287 aa14.53□□□□□ -0.08
CHD3-205ENST00000449744 FAM26EQ8N5C1 309 aa14.53□□□□□ -0.08
CHD3-205ENST00000449744 Q8NA96 180 aa14.53□□□□□ -0.08
CHD3-205ENST00000449744 BBOF1Q8ND07 529 aa14.53□□□□□ -0.08
CHD3-205ENST00000449744 OR11G2Q8NGC1 345 aa14.53□□□□□ -0.08
CHD3-205ENST00000449744 DRC3Q9H069 523 aa14.53□□□□□ -0.08
CHD3-205ENST00000449744 ILKAPQ9H0C8 392 aaPredicted RBP14.53□□□□□ -0.08
CHD3-205ENST00000449744 SYNPO2LQ9H987 977 aa14.53□□□□□ -0.08
CHD3-205ENST00000449744 C14orf105Q9NVL8 296 aa14.53□□□□□ -0.08
CHD3-205ENST00000449744 ARL15Q9NXU5 204 aa14.53□□□□□ -0.08
CHD3-205ENST00000449744 B3GNT3Q9Y2A9 372 aa14.53□□□□□ -0.08
CHD3-205ENST00000449744 NBASA2RRP1 2371 aa14.52□□□□□ -0.08
CHD3-205ENST00000449744 IGLV3-12A0A075B6K2 115 aa14.52□□□□□ -0.09
CHD3-205ENST00000449744 A0A0A6YYC8 382 aaPredicted RBP14.52□□□□□ -0.09
CHD3-205ENST00000449744 I3L1I5 382 aaPredicted RBP14.52□□□□□ -0.09
CHD3-205ENST00000449744 FFAR3O14843 346 aa14.52□□□□□ -0.09
CHD3-205ENST00000449744 GPR42O15529 346 aa14.52□□□□□ -0.09
CHD3-205ENST00000449744 P2RX6O15547 441 aa14.52□□□□□ -0.09
CHD3-205ENST00000449744 HPP00738 406 aa14.52□□□□□ -0.09
CHD3-205ENST00000449744 FDXRP22570 491 aa14.52□□□□□ -0.09
CHD3-205ENST00000449744 GNLYP22749 145 aa14.52□□□□□ -0.09
CHD3-205ENST00000449744 GRK3P35626 688 aa14.52□□□□□ -0.09
CHD3-205ENST00000449744 MGAT5Q09328 741 aa14.52□□□□□ -0.09
CHD3-205ENST00000449744 FAM53BQ14153 422 aa14.52□□□□□ -0.09
CHD3-205ENST00000449744 PHKG1Q16816 387 aa14.52□□□□□ -0.09
CHD3-205ENST00000449744 PLEKHN1Q494U1 663 aaPredicted RBP14.52□□□□□ -0.09
CHD3-205ENST00000449744 PRR30Q53SZ7 412 aaPredicted RBP14.52□□□□□ -0.09
CHD3-205ENST00000449744 AGAP7PQ5VUJ5 663 aa14.52□□□□□ -0.09
CHD3-205ENST00000449744 CAPN13Q6MZZ7 669 aaPredicted RBP14.52□□□□□ -0.09
CHD3-205ENST00000449744 LCTLQ6UWM7 567 aa14.52□□□□□ -0.09
CHD3-205ENST00000449744 FBXO36Q8NEA4 188 aa14.52□□□□□ -0.09
CHD3-205ENST00000449744 THAP11Q96EK4 314 aa14.52□□□□□ -0.09
CHD3-205ENST00000449744 AGAP4Q96P64 663 aa14.52□□□□□ -0.09
CHD3-205ENST00000449744 WDR83Q9BRX9 315 aaKnown RBP14.52□□□□□ -0.09
CHD3-205ENST00000449744 SLC29A3Q9BZD2 475 aa14.52□□□□□ -0.09
CHD3-205ENST00000449744 LHPPQ9H008 270 aa14.52□□□□□ -0.09
CHD3-205ENST00000449744 PLAC1Q9HBJ0 212 aa14.52□□□□□ -0.09
CHD3-205ENST00000449744 MKKSQ9NPJ1 570 aaPredicted RBP14.52□□□□□ -0.09
CHD3-205ENST00000449744 SNX24Q9Y343 169 aa14.52□□□□□ -0.09
CHD3-205ENST00000449744 HEATR5BQ9P2D3 2071 aa14.52□□□□□ -0.09
CHD3-205ENST00000449744 NUP210LQ5VU65 1888 aa14.52□□□□□ -0.09
CHD3-205ENST00000449744 PTPN13Q12923 2485 aa14.52□□□□□ -0.09
CHD3-205ENST00000449744 DOPEY2Q9Y3R5 2298 aa14.52□□□□□ -0.09
CHD3-205ENST00000449744 IDSB3KWA1 339 aa14.51□□□□□ -0.09
CHD3-205ENST00000449744 FOXS1O43638 330 aa14.51□□□□□ -0.09
CHD3-205ENST00000449744 STATHP02808 62 aa14.51□□□□□ -0.09
CHD3-205ENST00000449744 HEXBP07686 556 aa14.51□□□□□ -0.09
CHD3-205ENST00000449744 SAT1P21673 171 aa14.51□□□□□ -0.09
CHD3-205ENST00000449744 SLC26A3P40879 764 aa14.51□□□□□ -0.09
CHD3-205ENST00000449744 UQCRFS1P47985 274 aa14.51□□□□□ -0.09
CHD3-205ENST00000449744 AP1S2P56377 157 aa14.51□□□□□ -0.09
CHD3-205ENST00000449744 CSNK1G2P78368 415 aa14.51□□□□□ -0.09
CHD3-205ENST00000449744 FRG1Q14331 258 aaKnown RBP14.51□□□□□ -0.09
CHD3-205ENST00000449744 DUPD1Q68J44 220 aa14.51□□□□□ -0.09
CHD3-205ENST00000449744 LAPTM4BQ86VI4 370 aa14.51□□□□□ -0.09
CHD3-205ENST00000449744 AMER3Q8N944 861 aa14.51□□□□□ -0.09
CHD3-205ENST00000449744 CAMKVQ8NCB2 501 aa14.51□□□□□ -0.09
CHD3-205ENST00000449744 ATL1Q8WXF7 558 aa14.51□□□□□ -0.09
CHD3-205ENST00000449744 C8orf44Q96CB5 159 aa14.51□□□□□ -0.09
CHD3-205ENST00000449744 THOC3Q96J01 351 aaKnown RBP14.51□□□□□ -0.09
CHD3-205ENST00000449744 OLFM1Q99784 485 aa14.51□□□□□ -0.09
CHD3-205ENST00000449744 HAUS8Q9BT25 410 aa14.51□□□□□ -0.09
CHD3-205ENST00000449744 SGPP1Q9BX95 441 aa14.51□□□□□ -0.09
CHD3-205ENST00000449744 EPS8L2Q9H6S3 715 aa14.51□□□□□ -0.09
CHD3-205ENST00000449744 ZNF160Q9HCG1 818 aa14.51□□□□□ -0.09
CHD3-205ENST00000449744 MDC1Q14676 2089 aaKnown RBP14.5□□□□□ -0.09
CHD3-205ENST00000449744 UBR5O95071 2799 aaPredicted RBP14.5□□□□□ -0.09
CHD3-205ENST00000449744 KCNE1BA0A087WTH5 132 aa14.5□□□□□ -0.09
CHD3-205ENST00000449744 NSG1A0A0A6YYJ2 146 aa14.5□□□□□ -0.09
CHD3-205ENST00000449744 FEZF1A0PJY2 475 aa14.5□□□□□ -0.09
CHD3-205ENST00000449744 H0YIG0 161 aa14.5□□□□□ -0.09
CHD3-205ENST00000449744 GUCA1CO95843 209 aa14.5□□□□□ -0.09
CHD3-205ENST00000449744 TSPAN12O95859 305 aa14.5□□□□□ -0.09
CHD3-205ENST00000449744 ENO2P09104 434 aaPredicted RBP14.5□□□□□ -0.09
CHD3-205ENST00000449744 CDH1P12830 882 aa14.5□□□□□ -0.09
CHD3-205ENST00000449744 RPL21P46778 160 aaKnown RBP14.5□□□□□ -0.09
CHD3-205ENST00000449744 GLRBP48167 497 aa14.5□□□□□ -0.09
CHD3-205ENST00000449744 PGGT1BP53609 377 aa14.5□□□□□ -0.09
CHD3-205ENST00000449744 CALCOCO2Q13137 446 aa14.5□□□□□ -0.09
CHD3-205ENST00000449744 SYT16Q17RD7 645 aa14.5□□□□□ -0.09
CHD3-205ENST00000449744 FHL5Q5TD97 284 aa14.5□□□□□ -0.09
CHD3-205ENST00000449744 ATG9BQ674R7 924 aa14.5□□□□□ -0.09
CHD3-205ENST00000449744 FAAH2Q6GMR7 532 aa14.5□□□□□ -0.09
CHD3-205ENST00000449744 MAATS1Q7Z4T9 603 aa14.5□□□□□ -0.09
CHD3-205ENST00000449744 STRA8Q7Z7C7 330 aa14.5□□□□□ -0.09
CHD3-205ENST00000449744 ASPGQ86U10 573 aa14.5□□□□□ -0.09
CHD3-205ENST00000449744 ZBED8Q8IZ13 594 aa14.5□□□□□ -0.09
CHD3-205ENST00000449744 ARHGEF39Q8N4T4 335 aa14.5□□□□□ -0.09
CHD3-205ENST00000449744 CISD2Q8N5K1 135 aaKnown RBP14.5□□□□□ -0.09
CHD3-205ENST00000449744 WDR77Q9BQA1 342 aaPredicted RBP14.5□□□□□ -0.09
CHD3-205ENST00000449744 TGIF2Q9GZN2 237 aa14.5□□□□□ -0.09
CHD3-205ENST00000449744 ZBTB20Q9HC78 741 aaPredicted RBP14.5□□□□□ -0.09
CHD3-205ENST00000449744 NSMCE4AQ9NXX6 385 aa14.5□□□□□ -0.09
CHD3-205ENST00000449744 SH2B3Q9UQQ2 575 aa14.5□□□□□ -0.09
CHD3-205ENST00000449744 FAM95CA0A1B0GW59 222 aa14.49□□□□□ -0.09
CHD3-205ENST00000449744 FAM187AA6NFU0 413 aa14.49□□□□□ -0.09
CHD3-205ENST00000449744 E7ESA3 106 aa14.49□□□□□ -0.09
CHD3-205ENST00000449744 PCDH17O14917 1159 aa14.49□□□□□ -0.09
CHD3-205ENST00000449744 UQCRHP07919 91 aa14.49□□□□□ -0.09
CHD3-205ENST00000449744 NPPBP16860 134 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms