RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 TINAGQ9UJW2 476 aa3.95□□□□□ -1.78
VPS29-202ENST00000447578 MAN1B1Q9UKM7 699 aa3.95□□□□□ -1.78
VPS29-202ENST00000447578 RNF150Q9ULK6 438 aa3.95□□□□□ -1.78
VPS29-202ENST00000447578 PADI2Q9Y2J8 665 aa3.95□□□□□ -1.78
VPS29-202ENST00000447578 NRAPQ86VF7 1730 aa3.95□□□□□ -1.78
VPS29-202ENST00000447578 ARAP2Q8WZ64 1704 aa3.95□□□□□ -1.78
VPS29-202ENST00000447578 RREB1Q92766 1687 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 WNK3Q9BYP7 1800 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 hDV102S1A0JD36 115 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 USP27XA6NNY8 438 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 PTGESO14684 152 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 SLC30A4O14863 429 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 EIF3DO15371 548 aaKnown RBP eCLIP3.94□□□□□ -1.78
VPS29-202ENST00000447578 POLR2DO15514 142 aaKnown RBP3.94□□□□□ -1.78
VPS29-202ENST00000447578 ASAP2O43150 1006 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 ZBTB14O43829 449 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 NMT2O60551 498 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 TOM1O60784 492 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 NDUFS7O75251 213 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 DDNO94850 711 aaPredicted RBP3.94□□□□□ -1.78
VPS29-202ENST00000447578 PLGP00747 810 aaPredicted RBP3.94□□□□□ -1.78
VPS29-202ENST00000447578 LCATP04180 440 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 RAB40ALP0C0E4 278 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 PLA2G4BP0C869 781 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 TOP1P11387 765 aaKnown RBP3.94□□□□□ -1.78
VPS29-202ENST00000447578 PCP11498 1178 aaKnown RBP3.94□□□□□ -1.78
VPS29-202ENST00000447578 EEF2P13639 858 aaKnown RBP3.94□□□□□ -1.78
VPS29-202ENST00000447578 TCF4P15884 667 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 KCNA5P22460 613 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 ACAT1P24752 427 aaKnown RBP3.94□□□□□ -1.78
VPS29-202ENST00000447578 CASP3P42574 277 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 CTSCP53634 463 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 UBASH3AP57075 661 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 PLA2G7Q13093 441 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 PTPN14Q15678 1187 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 UGCGQ16739 394 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 KBTBD12Q3ZCT8 623 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 SLC39A12Q504Y0 691 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 ARMCX5Q6P1M9 558 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 BRAT1Q6PJG6 821 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 FOXP4Q8IVH2 680 aaPredicted RBP3.94□□□□□ -1.78
VPS29-202ENST00000447578 C4orf19Q8IY42 314 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 PM20D2Q8IYS1 436 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 ZNF619Q8N2I2 560 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 ZNF611Q8N823 705 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 UXS1Q8NBZ7 420 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 CCDC112Q8NEF3 446 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 OR7G3Q8NG95 312 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 ST6GALNAC6Q969X2 333 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 DHX58Q96C10 678 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 SLC22A12Q96S37 553 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 MTERF1Q99551 399 aaKnown RBP3.94□□□□□ -1.78
VPS29-202ENST00000447578 CPNE1Q99829 537 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 FN3KQ9H479 309 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 HHATLQ9HCP6 504 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 TUFT1Q9NNX1 390 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 MYNNQ9NPC7 610 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 CNIH4Q9P003 139 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 RHCGQ9UBD6 479 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 MTUS1Q9ULD2 1270 aa3.94□□□□□ -1.78
VPS29-202ENST00000447578 CICQ96RK0 1608 aaPredicted RBP3.94□□□□□ -1.78
VPS29-202ENST00000447578 PHLPP1O60346 1717 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 DDX60Q8IY21 1712 aaKnown RBP3.93□□□□□ -1.78
VPS29-202ENST00000447578 LTBP4Q8N2S1 1624 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 A0A1W2PPQ1 181 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 SMIM30A4D0T7 59 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 GOLGA6L9A6NEM1 432 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 C5orf52A6NGY3 159 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 VWA5AO00534 786 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 SOCS6O14544 535 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 LINC01565O15544 149 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 ST8SIA3O43173 380 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 SPRY3O43610 288 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 B3GALNT1O75752 331 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 OLFM2O95897 454 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 ITIH1P19827 911 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 KIF5BP33176 963 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 CTNNB1P35222 781 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 RFC4P35249 363 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 NME5P56597 212 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 CLDN20P56880 219 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 PTENP60484 403 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 PDE1BQ01064 536 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 TROAPQ12815 778 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 NPRL3Q12980 569 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 AMZ1Q400G9 498 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 SBK1Q52WX2 424 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 HSP90AA4PQ58FG1 418 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 DNAJC21Q5F1R6 531 aaKnown RBP3.93□□□□□ -1.78
VPS29-202ENST00000447578 FSCBQ5H9T9 825 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 LRRC73Q5JTD7 316 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 GCNT6Q5T4J0 391 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 OTUD1Q5VV17 481 aaPredicted RBP3.93□□□□□ -1.78
VPS29-202ENST00000447578 RGMBQ6NW40 437 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 CASC4Q6P4E1 433 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 WDR73Q6P4I2 378 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 ENPP7Q6UWV6 458 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 TMEM182Q6ZP80 229 aaPredicted RBP3.93□□□□□ -1.78
VPS29-202ENST00000447578 KCTD9Q7L273 389 aa3.93□□□□□ -1.78
VPS29-202ENST00000447578 NUP54Q7Z3B4 507 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms