RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 ANKMY1Q9P2S6 941 aa17.25■□□□□ 0.35
TRAPPC4-203ENST00000447216 KCNE1BA0A087WTH5 132 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 A0A0J9YVX5 310 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 FFAR3O14843 346 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 POLR3GO15318 223 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 GPR42O15529 346 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 HSPA4LO95757 839 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 STATHP02808 62 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 ANKRD34CP0C6C1 535 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 EBLN1P0CF75 366 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 SDHBP21912 280 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 GRK2P25098 689 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 BCL6P41182 706 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 PKNOX1P55347 436 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 TRA2AQ13595 282 aaKnown RBP eCLIP17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 NAA25Q14CX7 972 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 RBBP5Q15291 538 aaKnown RBP17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 CPSF6Q16630 551 aaKnown RBP eCLIP17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 ISXQ2M1V0 245 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 LIPJQ5W064 366 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 ATG16L1Q676U5 607 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 GRHL2Q6ISB3 625 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 FBXO42Q6P3S6 717 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 CUZD1Q86UP6 607 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 DNAJC22Q8N4W6 341 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 CDYL2Q8N8U2 506 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 AGR3Q8TD06 166 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 TCTN2Q96GX1 697 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 SORT1Q99523 831 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 TRMOQ9BU70 441 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 EFCAB11Q9BUY7 163 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 PDE7BQ9NP56 450 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 DLL3Q9NYJ7 618 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 BTRCQ9Y297 605 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 STK38LQ9Y2H1 464 aa17.24■□□□□ 0.35
TRAPPC4-203ENST00000447216 SPTBN4Q9H254 2564 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 TRBC2A0A5B9 178 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 TOX3O15405 576 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 OR1F1O43749 312 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 SNNO75324 88 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 ESRRBO95718 433 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 CTSBP07858 339 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 CDK4P11802 303 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 HGFP14210 728 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 JUPP14923 745 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 NELFEP18615 380 aaKnown RBP17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 CCKBRP32239 447 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 SERPINB5P36952 375 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 FOXA1P55317 472 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 HSD11B2P80365 405 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 E2F2Q14209 437 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 GPR19Q15760 415 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 TCHHL1Q5QJ38 904 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 FRMPD2BQ6IN97 320 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 ADNP2Q6IQ32 1131 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 RNF44Q7L0R7 432 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 KMT5CQ86Y97 462 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 MARCH9Q86YJ5 346 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 KRT78Q8N1N4 520 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 D2HGDHQ8N465 521 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 RAB3IL1Q8TBN0 382 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 GRAMD1AQ96CP6 724 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 MAGEB18Q96M61 343 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 DEPDC7Q96QD5 511 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 TRPS1Q9UHF7 1281 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 PILRAQ9UKJ1 303 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 ZNF490Q9ULM2 529 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 FIS1Q9Y3D6 152 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 TIMM22Q9Y584 194 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 SPTBN2O15020 2390 aa17.23■□□□□ 0.35
TRAPPC4-203ENST00000447216 LOC105369274A0A096LPK9 316 aa17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 LOC102723532A0A0G2JNH3 316 aa17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 TMEM233B4DJY2 109 aa17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 UGDHO60701 494 aa17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 CAPN1P07384 714 aa17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 PCNAP12004 261 aa17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 EZRP15311 586 aaKnown RBP17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 FOLR1P15328 257 aa17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 SERPINB3P29508 390 aa17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 GRK3P35626 688 aa17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 MDH1P40925 334 aaKnown RBP17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 HNF4AP41235 474 aa17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 GABRA4P48169 554 aa17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 CYP4F2P78329 520 aa17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 LAPTM5Q13571 262 aa17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 COL9A2Q14055 689 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 ZRSR2Q15696 482 aaKnown RBP17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 HIST2H2ACQ16777 129 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 SGO1Q5FBB7 561 aa17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 PAGE2BQ5JRK9 111 aa17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 SH2D4BQ5SQS7 431 aa17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 CLEC6AQ6EIG7 209 aa17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 HIST2H2AA3Q6FI13 130 aa17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 MED27Q6P2C8 311 aa17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 TMIGD1Q6UXZ0 262 aa17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 OR4N4Q8N0Y3 316 aa17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 RNF175Q8N4F7 328 aa17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 ANKRD53Q8N9V6 530 aa17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 MTFMTQ96DP5 389 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms