RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 TBC1D21Q8IYX1 336 aa16.81■□□□□ 0.28
SMC6-206ENST00000446852 CBR4Q8N4T8 237 aa16.81■□□□□ 0.28
SMC6-206ENST00000446852 NELL1Q92832 810 aa16.81■□□□□ 0.28
SMC6-206ENST00000446852 MSLNLQ96KJ4 702 aa16.81■□□□□ 0.28
SMC6-206ENST00000446852 RNF145Q96MT1 663 aa16.81■□□□□ 0.28
SMC6-206ENST00000446852 GORASP2Q9H8Y8 452 aa16.81■□□□□ 0.28
SMC6-206ENST00000446852 PRM3Q9NNZ6 103 aa16.81■□□□□ 0.28
SMC6-206ENST00000446852 DMRT3Q9NQL9 472 aa16.81■□□□□ 0.28
SMC6-206ENST00000446852 OAZ3Q9UMX2 235 aa16.81■□□□□ 0.28
SMC6-206ENST00000446852 DNMT3AQ9Y6K1 912 aaPredicted RBP16.81■□□□□ 0.28
SMC6-206ENST00000446852 ANHXE9PGG2 379 aa16.81■□□□□ 0.28
SMC6-206ENST00000446852 PI15O43692 258 aa16.81■□□□□ 0.28
SMC6-206ENST00000446852 MYO1DO94832 1006 aa16.81■□□□□ 0.28
SMC6-206ENST00000446852 LAMP1P11279 417 aa16.81■□□□□ 0.28
SMC6-206ENST00000446852 ERGP11308 486 aa16.81■□□□□ 0.28
SMC6-206ENST00000446852 FCGR1AP12314 374 aa16.81■□□□□ 0.28
SMC6-206ENST00000446852 SRSF11Q05519 484 aaKnown RBP16.81■□□□□ 0.28
SMC6-206ENST00000446852 PAGE2BQ5JRK9 111 aa16.81■□□□□ 0.28
SMC6-206ENST00000446852 INTS11Q5TA45 600 aaKnown RBP16.81■□□□□ 0.28
SMC6-206ENST00000446852 ZNF551Q7Z340 670 aaPredicted RBP16.81■□□□□ 0.28
SMC6-206ENST00000446852 OR8J2Q8NGG1 315 aa16.81■□□□□ 0.28
SMC6-206ENST00000446852 MENTQ9BUN1 341 aa16.81■□□□□ 0.28
SMC6-206ENST00000446852 ACAT2Q9BWD1 397 aa16.81■□□□□ 0.28
SMC6-206ENST00000446852 CHID1Q9BWS9 393 aa16.81■□□□□ 0.28
SMC6-206ENST00000446852 PLXND1Q9Y4D7 1925 aa16.81■□□□□ 0.28
SMC6-206ENST00000446852 SCAMP2O15127 329 aaKnown RBP16.8■□□□□ 0.28
SMC6-206ENST00000446852 GSTA4O15217 222 aa16.8■□□□□ 0.28
SMC6-206ENST00000446852 LATO43561 262 aa16.8■□□□□ 0.28
SMC6-206ENST00000446852 LINGO3P0C6S8 592 aa16.8■□□□□ 0.28
SMC6-206ENST00000446852 ACP5P13686 325 aa16.8■□□□□ 0.28
SMC6-206ENST00000446852 TIA1P31483 386 aaKnown RBP eCLIP16.8■□□□□ 0.28
SMC6-206ENST00000446852 CLCNKAP51800 687 aa16.8■□□□□ 0.28
SMC6-206ENST00000446852 ADPRHP54922 357 aa16.8■□□□□ 0.28
SMC6-206ENST00000446852 PON2Q15165 354 aa16.8■□□□□ 0.28
SMC6-206ENST00000446852 ATP6AP1Q15904 470 aa16.8■□□□□ 0.28
SMC6-206ENST00000446852 DUOXA1Q1HG43 343 aa16.8■□□□□ 0.28
SMC6-206ENST00000446852 HKDC1Q2TB90 917 aa16.8■□□□□ 0.28
SMC6-206ENST00000446852 LCTLQ6UWM7 567 aa16.8■□□□□ 0.28
SMC6-206ENST00000446852 ISLR2Q6UXK2 745 aa16.8■□□□□ 0.28
SMC6-206ENST00000446852 ARMCX6Q7L4S7 300 aa16.8■□□□□ 0.28
SMC6-206ENST00000446852 MICU2Q8IYU8 434 aa16.8■□□□□ 0.28
SMC6-206ENST00000446852 SLC17A9Q9BYT1 436 aa16.8■□□□□ 0.28
SMC6-206ENST00000446852 FZD3Q9NPG1 666 aa16.8■□□□□ 0.28
SMC6-206ENST00000446852 PHPT1Q9NRX4 125 aaPredicted RBP16.8■□□□□ 0.28
SMC6-206ENST00000446852 WDR37Q9Y2I8 494 aa16.8■□□□□ 0.28
SMC6-206ENST00000446852 FAM220BPB1ANY3 271 aa16.8■□□□□ 0.28
SMC6-206ENST00000446852 GPR89AB7ZAQ6 455 aa16.8■□□□□ 0.28
SMC6-206ENST00000446852 FOXE1O00358 373 aaPredicted RBP16.8■□□□□ 0.28
SMC6-206ENST00000446852 ACOX3O15254 700 aa16.8■□□□□ 0.28
SMC6-206ENST00000446852 DNTTP04053 509 aa16.8■□□□□ 0.28
SMC6-206ENST00000446852 GPR89BP0CG08 455 aa16.8■□□□□ 0.28
SMC6-206ENST00000446852 MYCLP1P12525 358 aaPredicted RBP16.8■□□□□ 0.28
SMC6-206ENST00000446852 HOXB2P14652 356 aa16.8■□□□□ 0.28
SMC6-206ENST00000446852 IGFALSP35858 605 aa16.8■□□□□ 0.28
SMC6-206ENST00000446852 SGCGQ13326 291 aa16.8■□□□□ 0.28
SMC6-206ENST00000446852 CHERPQ8IWX8 916 aaKnown RBP16.8■□□□□ 0.28
SMC6-206ENST00000446852 CLECL1Q8IZS7 167 aa16.8■□□□□ 0.28
SMC6-206ENST00000446852 SETD7Q8WTS6 366 aaKnown RBP16.8■□□□□ 0.28
SMC6-206ENST00000446852 PANX1Q96RD7 426 aa16.8■□□□□ 0.28
SMC6-206ENST00000446852 CXorf56Q9H5V9 222 aa16.8■□□□□ 0.28
SMC6-206ENST00000446852 TRIOO75962 3097 aa16.8■□□□□ 0.28
SMC6-206ENST00000446852 SAP18O00422 153 aaKnown RBP16.79■□□□□ 0.28
SMC6-206ENST00000446852 CXCR6O00574 342 aa16.79■□□□□ 0.28
SMC6-206ENST00000446852 DLGAP1O14490 977 aa16.79■□□□□ 0.28
SMC6-206ENST00000446852 FPGTO14772 594 aa16.79■□□□□ 0.28
SMC6-206ENST00000446852 PCDH7O60245 1069 aa16.79■□□□□ 0.28
SMC6-206ENST00000446852 RNGTTO60942 597 aaKnown RBP16.79■□□□□ 0.28
SMC6-206ENST00000446852 KLF8O95600 359 aaPredicted RBP16.79■□□□□ 0.28
SMC6-206ENST00000446852 TGFB1P01137 390 aa16.79■□□□□ 0.28
SMC6-206ENST00000446852 SLC35G4P0C7Q5 338 aa16.79■□□□□ 0.28
SMC6-206ENST00000446852 EFNA1P20827 205 aaPredicted RBP16.79■□□□□ 0.28
SMC6-206ENST00000446852 MAT2AP31153 395 aaKnown RBP16.79■□□□□ 0.28
SMC6-206ENST00000446852 HNRNPFP52597 415 aaKnown RBP16.79■□□□□ 0.28
SMC6-206ENST00000446852 NKG7Q16617 165 aa16.79■□□□□ 0.28
SMC6-206ENST00000446852 CAPRIN2Q6IMN6 1127 aaKnown RBP16.79■□□□□ 0.28
SMC6-206ENST00000446852 GALNT18Q6P9A2 607 aa16.79■□□□□ 0.28
SMC6-206ENST00000446852 ENPP6Q6UWR7 440 aa16.79■□□□□ 0.28
SMC6-206ENST00000446852 COMMD6Q7Z4G1 85 aa16.79■□□□□ 0.28
SMC6-206ENST00000446852 TNIP2Q8NFZ5 429 aa16.79■□□□□ 0.28
SMC6-206ENST00000446852 FAM120BQ96EK7 910 aaKnown RBP16.79■□□□□ 0.28
SMC6-206ENST00000446852 OR51B5Q9H339 312 aa16.79■□□□□ 0.28
SMC6-206ENST00000446852 ADGRE2Q9UHX3 823 aa16.79■□□□□ 0.28
SMC6-206ENST00000446852 EXO1Q9UQ84 846 aaKnown RBP16.79■□□□□ 0.28
SMC6-206ENST00000446852 AP3M1Q9Y2T2 418 aa16.79■□□□□ 0.28
SMC6-206ENST00000446852 GNG14A0A1W2PPG7 69 aa16.79■□□□□ 0.28
SMC6-206ENST00000446852 GABRR3A8MPY1 467 aa16.79■□□□□ 0.28
SMC6-206ENST00000446852 GBAP04062 536 aa16.79■□□□□ 0.28
SMC6-206ENST00000446852 CEACAM5P06731 702 aa16.79■□□□□ 0.28
SMC6-206ENST00000446852 ASMTP46597 345 aa16.79■□□□□ 0.28
SMC6-206ENST00000446852 TRPC1P48995 793 aa16.79■□□□□ 0.28
SMC6-206ENST00000446852 HIST2H2ACQ16777 129 aaPredicted RBP16.79■□□□□ 0.28
SMC6-206ENST00000446852 C10orf62Q5T681 223 aaPredicted RBP16.79■□□□□ 0.28
SMC6-206ENST00000446852 HIST2H2AA3Q6FI13 130 aa16.79■□□□□ 0.28
SMC6-206ENST00000446852 SDE2Q6IQ49 451 aa16.79■□□□□ 0.28
SMC6-206ENST00000446852 KIAA1161Q6NSJ0 714 aa16.79■□□□□ 0.28
SMC6-206ENST00000446852 VN1R5Q7Z5H4 357 aa16.79■□□□□ 0.28
SMC6-206ENST00000446852 FAM129CQ86XR2 697 aa16.79■□□□□ 0.28
SMC6-206ENST00000446852 FBXO30Q8TB52 745 aa16.79■□□□□ 0.28
SMC6-206ENST00000446852 SH3KBP1Q96B97 665 aa16.79■□□□□ 0.28
SMC6-206ENST00000446852 OSBPL11Q9BXB4 747 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms