RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 MGAT4DA6NG13 374 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 PIM1P11309 404 aaPredicted RBP16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 FCGR1AP12314 374 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 PSMB5P28074 263 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 MAPK1P28482 360 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 HNF4AP41235 474 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 RPL5P46777 297 aaKnown RBP16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 PDGFRLQ15198 375 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 PPP2R2DQ66LE6 453 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 CAPN13Q6MZZ7 669 aaPredicted RBP16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 FAM20CQ8IXL6 584 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 MMP21Q8N119 569 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 FZD3Q9NPG1 666 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 RAD18Q9NS91 495 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 THG1LQ9NWX6 298 aaKnown RBP16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 SMPD3Q9NY59 655 aaPredicted RBP16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 hCG_2039718K7EN88 272 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 RASAL1O95294 804 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 RAP2AP10114 183 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 CDKL4Q5MAI5 379 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 LIPJQ5W064 366 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 PLD3Q8IV08 490 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 DHRSXQ8N5I4 330 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 NELL1Q92832 810 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 FGF14Q92915 247 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 CPPED1Q9BRF8 314 aaPredicted RBP16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 KCNH6Q9H252 994 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 SFXN1Q9H9B4 322 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 DYRK1BQ9Y463 629 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 CXorf51AA0A1B0GTR3 108 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 MYO1GB0I1T2 1018 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 H3BSA7 217 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 CLIC1O00299 241 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 QSOX1O00391 747 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 DEAF1O75398 565 aaPredicted RBP16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 H6PDO95479 791 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 TXNL4AP83876 142 aaKnown RBP16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 PARM1Q6UWI2 310 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 VTCN1Q7Z7D3 282 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 UBE2Q1Q7Z7E8 422 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 ZCCHC2Q9C0B9 1178 aaKnown RBP16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 MCOLN1Q9GZU1 580 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 TMEM245Q9H330 911 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 MUC13Q9H3R2 512 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 LIN28AQ9H9Z2 209 aaKnown RBP16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 TRIM39Q9HCM9 518 aa16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 MBNL1Q9NR56 388 aaKnown RBP16.22■□□□□ 0.19
LAPTM4B-201ENST00000445593 MYO1DO94832 1006 aa16.21■□□□□ 0.19
LAPTM4B-201ENST00000445593 NPPBP16860 134 aa16.21■□□□□ 0.19
LAPTM4B-201ENST00000445593 INTS11Q5TA45 600 aaKnown RBP16.21■□□□□ 0.19
LAPTM4B-201ENST00000445593 METTL2BQ6P1Q9 378 aaKnown RBP16.21■□□□□ 0.19
LAPTM4B-201ENST00000445593 TMCO5AQ8N6Q1 288 aa16.21■□□□□ 0.19
LAPTM4B-201ENST00000445593 OR5AK3PQ8NH89 298 aa16.21■□□□□ 0.19
LAPTM4B-201ENST00000445593 CSGALNACT1Q8TDX6 532 aa16.21■□□□□ 0.19
LAPTM4B-201ENST00000445593 FAM192AQ9GZU8 254 aa16.21■□□□□ 0.19
LAPTM4B-201ENST00000445593 PNPLA3Q9NST1 481 aa16.21■□□□□ 0.19
LAPTM4B-201ENST00000445593 DDX18Q9NVP1 670 aaKnown RBP16.21■□□□□ 0.19
LAPTM4B-201ENST00000445593 ACSL6Q9UKU0 697 aa16.21■□□□□ 0.19
LAPTM4B-201ENST00000445593 A0A0G2JN53 185 aa16.21■□□□□ 0.19
LAPTM4B-201ENST00000445593 EVPLLA8MZ36 301 aa16.21■□□□□ 0.19
LAPTM4B-201ENST00000445593 RTCAO00442 366 aaKnown RBP16.21■□□□□ 0.19
LAPTM4B-201ENST00000445593 LILRB5O75023 590 aa16.21■□□□□ 0.19
LAPTM4B-201ENST00000445593 UMPSP11172 480 aa16.21■□□□□ 0.19
LAPTM4B-201ENST00000445593 FCARP24071 287 aa16.21■□□□□ 0.19
LAPTM4B-201ENST00000445593 MAPK10P53779 464 aa16.21■□□□□ 0.19
LAPTM4B-201ENST00000445593 DUSP6Q16828 381 aa16.21■□□□□ 0.19
LAPTM4B-201ENST00000445593 NEK10Q6ZWH5 1172 aa16.21■□□□□ 0.19
LAPTM4B-201ENST00000445593 FAM124AQ86V42 546 aa16.21■□□□□ 0.19
LAPTM4B-201ENST00000445593 AADATQ8N5Z0 425 aa16.21■□□□□ 0.19
LAPTM4B-201ENST00000445593 WDR48Q8TAF3 677 aa16.21■□□□□ 0.19
LAPTM4B-201ENST00000445593 MRPS26Q9BYN8 205 aaKnown RBP16.21■□□□□ 0.19
LAPTM4B-201ENST00000445593 ANKRD60Q9BZ19 345 aa16.21■□□□□ 0.19
LAPTM4B-201ENST00000445593 ZNF696Q9H7X3 374 aa16.21■□□□□ 0.19
LAPTM4B-201ENST00000445593 SPASTQ9UBP0 616 aa16.21■□□□□ 0.19
LAPTM4B-201ENST00000445593 RAPGEFL1Q9UHV5 662 aa16.21■□□□□ 0.19
LAPTM4B-201ENST00000445593 PCM1Q15154 2024 aa16.21■□□□□ 0.19
LAPTM4B-201ENST00000445593 A0A096LPI6 279 aa16.2■□□□□ 0.18
LAPTM4B-201ENST00000445593 GABRR3A8MPY1 467 aa16.2■□□□□ 0.18
LAPTM4B-201ENST00000445593 C1QTNF3-AMACRE9PGA6 284 aa16.2■□□□□ 0.18
LAPTM4B-201ENST00000445593 PCDH7O60245 1069 aa16.2■□□□□ 0.18
LAPTM4B-201ENST00000445593 ERN1O75460 977 aaKnown RBP16.2■□□□□ 0.18
LAPTM4B-201ENST00000445593 SERPIND1P05546 499 aa16.2■□□□□ 0.18
LAPTM4B-201ENST00000445593 ELK4P28324 431 aa16.2■□□□□ 0.18
LAPTM4B-201ENST00000445593 TPD52P55327 224 aaPredicted RBP16.2■□□□□ 0.18
LAPTM4B-201ENST00000445593 TAP2Q03519 686 aa16.2■□□□□ 0.18
LAPTM4B-201ENST00000445593 CBX3Q13185 183 aa16.2■□□□□ 0.18
LAPTM4B-201ENST00000445593 GRHL2Q6ISB3 625 aa16.2■□□□□ 0.18
LAPTM4B-201ENST00000445593 MED27Q6P2C8 311 aa16.2■□□□□ 0.18
LAPTM4B-201ENST00000445593 SLCO4C1Q6ZQN7 724 aa16.2■□□□□ 0.18
LAPTM4B-201ENST00000445593 RIMKLAQ8IXN7 391 aa16.2■□□□□ 0.18
LAPTM4B-201ENST00000445593 HDDC3Q8N4P3 179 aa16.2■□□□□ 0.18
LAPTM4B-201ENST00000445593 OR56A3Q8NH54 315 aa16.2■□□□□ 0.18
LAPTM4B-201ENST00000445593 ZFP28Q8NHY6 868 aa16.2■□□□□ 0.18
LAPTM4B-201ENST00000445593 TPD52L3Q96J77 140 aa16.2■□□□□ 0.18
LAPTM4B-201ENST00000445593 MYADMQ96S97 322 aa16.2■□□□□ 0.18
LAPTM4B-201ENST00000445593 SH3GL1Q99961 368 aa16.2■□□□□ 0.18
LAPTM4B-201ENST00000445593 PLXNA2O75051 1894 aa16.2■□□□□ 0.18
LAPTM4B-201ENST00000445593 FKBP9O95302 570 aa16.2■□□□□ 0.18
LAPTM4B-201ENST00000445593 ALBP02768 609 aa16.2■□□□□ 0.18
LAPTM4B-201ENST00000445593 ACP5P13686 325 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms