RNA–Protein interactions for RNA: ENST00000445357.1

NCLP1-201, Transcript of nucleolin pseudogene 1, humanhuman

BASIC

Gene NCLP1, Length 1,963 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP1-201ENST00000445357 TBPL1P62380 186 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 VAC14Q08AM6 782 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 ELAVL3Q14576 367 aaKnown RBP13.65□□□□□ -0.22
NCLP1-201ENST00000445357 TMEM52BQ4KMG9 183 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 FNDC3BQ53EP0 1204 aaKnown RBP13.65□□□□□ -0.22
NCLP1-201ENST00000445357 ZC3H12BQ5HYM0 836 aaKnown RBP13.65□□□□□ -0.22
NCLP1-201ENST00000445357 MED27Q6P2C8 311 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 GALNT18Q6P9A2 607 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 TMEM179BQ7Z7N9 219 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 C8orf59Q8N0T1 100 aaPredicted RBP13.65□□□□□ -0.22
NCLP1-201ENST00000445357 NEIL2Q969S2 332 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 DUSP26Q9BV47 211 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 GABARAPL1Q9H0R8 117 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 CIDEBQ9UHD4 219 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 ERVK-11Q9UQG0 969 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 BTBD3Q9Y2F9 522 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 COQ6Q9Y2Z9 468 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 PCDHB11Q9Y5F2 797 aa13.65□□□□□ -0.22
NCLP1-201ENST00000445357 C17orf113A0A1B0GUU1 675 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 K7ESM1 405 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 YY2O15391 372 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 CPNE6O95741 557 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 SEMG1P04279 462 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 ANXA4P09525 319 aaPredicted RBP13.64□□□□□ -0.23
NCLP1-201ENST00000445357 C6P13671 934 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 HLA-EP13747 358 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 ADRB3P13945 408 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 TIA1P31483 386 aaKnown RBP eCLIP13.64□□□□□ -0.23
NCLP1-201ENST00000445357 HPCAL1P37235 193 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 SLC6A11P48066 632 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 RBBP5Q15291 538 aaKnown RBP13.64□□□□□ -0.23
NCLP1-201ENST00000445357 RFX4Q33E94 735 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 RBM48Q5RL73 367 aaKnown RBP13.64□□□□□ -0.23
NCLP1-201ENST00000445357 ANXA8L1Q5VT79 327 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 ADNP2Q6IQ32 1131 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 ZCCHC8Q6NZY4 707 aaKnown RBP13.64□□□□□ -0.23
NCLP1-201ENST00000445357 ZNF773Q6PK81 442 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 PTOV1Q86YD1 416 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 CFAP206Q8IYR0 622 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 CLECL1Q8IZS7 167 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 HS3ST5Q8IZT8 346 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 ZNF555Q8NEP9 628 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 SMG7Q92540 1137 aaKnown RBP13.64□□□□□ -0.23
NCLP1-201ENST00000445357 COQ8BQ96D53 544 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 CXorf40BQ96DE9 158 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 TUBA1CQ9BQE3 449 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 EFCAB11Q9BUY7 163 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 AMBRA1Q9C0C7 1298 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 OR2AG1Q9H205 316 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 EHD1Q9H4M9 534 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 TRIM39Q9HCM9 518 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 TIMMDC1Q9NPL8 285 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 ITM2CQ9NQX7 267 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 PRKAG2Q9UGJ0 569 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 C3orf18Q9UK00 162 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 RPS6KA6Q9UK32 745 aa13.64□□□□□ -0.23
NCLP1-201ENST00000445357 E2F6O75461 281 aa13.63□□□□□ -0.23
NCLP1-201ENST00000445357 C1QCP02747 245 aa13.63□□□□□ -0.23
NCLP1-201ENST00000445357 NPPBP16860 134 aa13.63□□□□□ -0.23
NCLP1-201ENST00000445357 JUNBP17275 347 aaPredicted RBP13.63□□□□□ -0.23
NCLP1-201ENST00000445357 IDSP22304 550 aa13.63□□□□□ -0.23
NCLP1-201ENST00000445357 PPIBP23284 216 aaKnown RBP13.63□□□□□ -0.23
NCLP1-201ENST00000445357 CALRP27797 417 aaKnown RBP13.63□□□□□ -0.23
NCLP1-201ENST00000445357 GPR1P46091 355 aa13.63□□□□□ -0.23
NCLP1-201ENST00000445357 RPS13P62277 151 aaKnown RBP13.63□□□□□ -0.23
NCLP1-201ENST00000445357 LRRC74AQ0VAA2 488 aa13.63□□□□□ -0.23
NCLP1-201ENST00000445357 VEZF1Q14119 521 aa13.63□□□□□ -0.23
NCLP1-201ENST00000445357 CPTPQ5TA50 214 aa13.63□□□□□ -0.23
NCLP1-201ENST00000445357 RAET1GQ6H3X3 334 aa13.63□□□□□ -0.23
NCLP1-201ENST00000445357 PDE12Q6L8Q7 609 aaKnown RBP13.63□□□□□ -0.23
NCLP1-201ENST00000445357 SHQ1Q6PI26 577 aaKnown RBP13.63□□□□□ -0.23
NCLP1-201ENST00000445357 ZNF621Q6ZSS3 439 aa13.63□□□□□ -0.23
NCLP1-201ENST00000445357 TMPRSS11BQ86T26 416 aa13.63□□□□□ -0.23
NCLP1-201ENST00000445357 TRIM74Q86UV6 250 aa13.63□□□□□ -0.23
NCLP1-201ENST00000445357 CLVS1Q8IUQ0 354 aaPredicted RBP13.63□□□□□ -0.23
NCLP1-201ENST00000445357 TRAPPC5Q8IUR0 188 aa13.63□□□□□ -0.23
NCLP1-201ENST00000445357 ZDHHC21Q8IVQ6 265 aa13.63□□□□□ -0.23
NCLP1-201ENST00000445357 LAS2Q8IYD9 372 aa13.63□□□□□ -0.23
NCLP1-201ENST00000445357 LRRC56Q8IYG6 542 aaPredicted RBP13.63□□□□□ -0.23
NCLP1-201ENST00000445357 OR9A1PQ8NGU1 263 aa13.63□□□□□ -0.23
NCLP1-201ENST00000445357 ZNF420Q8TAQ5 688 aaPredicted RBP13.63□□□□□ -0.23
NCLP1-201ENST00000445357 HDAC2Q92769 488 aaKnown RBP13.63□□□□□ -0.23
NCLP1-201ENST00000445357 ISOC1Q96CN7 298 aa13.63□□□□□ -0.23
NCLP1-201ENST00000445357 PPP1R16AQ96I34 528 aa13.63□□□□□ -0.23
NCLP1-201ENST00000445357 CNDP2Q96KP4 475 aaKnown RBP13.63□□□□□ -0.23
NCLP1-201ENST00000445357 FAM129BQ96TA1 746 aa13.63□□□□□ -0.23
NCLP1-201ENST00000445357 DOK1Q99704 481 aa13.63□□□□□ -0.23
NCLP1-201ENST00000445357 ING2Q9H160 280 aa13.63□□□□□ -0.23
NCLP1-201ENST00000445357 CHST8Q9H2A9 424 aa13.63□□□□□ -0.23
NCLP1-201ENST00000445357 IL1RAPQ9NPH3 570 aa13.63□□□□□ -0.23
NCLP1-201ENST00000445357 DEC1Q9P2X7 70 aa13.63□□□□□ -0.23
NCLP1-201ENST00000445357 TMEFF2Q9UIK5 374 aaPredicted RBP13.63□□□□□ -0.23
NCLP1-201ENST00000445357 AP1M2Q9Y6Q5 423 aa13.63□□□□□ -0.23
NCLP1-201ENST00000445357 C1orf226A1L170 272 aa13.63□□□□□ -0.23
NCLP1-201ENST00000445357 GABRR3A8MPY1 467 aa13.63□□□□□ -0.23
NCLP1-201ENST00000445357 FOXE1O00358 373 aaPredicted RBP13.63□□□□□ -0.23
NCLP1-201ENST00000445357 NOBOXO60393 691 aa13.63□□□□□ -0.23
NCLP1-201ENST00000445357 CPSF4O95639 269 aaKnown RBP13.63□□□□□ -0.23
NCLP1-201ENST00000445357 ABCB1P08183 1280 aaPredicted RBP13.63□□□□□ -0.23
NCLP1-201ENST00000445357 ELK4P28324 431 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms