RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 PTPN4P29074 926 aa16.67■□□□□ 0.26
SMARCAL1-209ENST00000444508 DEKP35659 375 aaKnown RBP16.67■□□□□ 0.26
SMARCAL1-209ENST00000444508 GCGRP47871 477 aa16.67■□□□□ 0.26
SMARCAL1-209ENST00000444508 SLC6A12P48065 614 aa16.67■□□□□ 0.26
SMARCAL1-209ENST00000444508 GLRBP48167 497 aa16.67■□□□□ 0.26
SMARCAL1-209ENST00000444508 VSNL1P62760 191 aa16.67■□□□□ 0.26
SMARCAL1-209ENST00000444508 RHDQ02161 417 aa16.67■□□□□ 0.26
SMARCAL1-209ENST00000444508 ACAP2Q15057 778 aa16.67■□□□□ 0.26
SMARCAL1-209ENST00000444508 MUM1Q2TAK8 710 aa16.67■□□□□ 0.26
SMARCAL1-209ENST00000444508 C18orf21Q32NC0 220 aaPredicted RBP16.67■□□□□ 0.26
SMARCAL1-209ENST00000444508 ZNF385CQ66K41 422 aaPredicted RBP16.67■□□□□ 0.26
SMARCAL1-209ENST00000444508 LCN10Q6JVE6 187 aa16.67■□□□□ 0.26
SMARCAL1-209ENST00000444508 ADGRD1Q6QNK2 874 aa16.67■□□□□ 0.26
SMARCAL1-209ENST00000444508 KLHDC8AQ8IYD2 350 aa16.67■□□□□ 0.26
SMARCAL1-209ENST00000444508 PDPRQ8NCN5 879 aa16.67■□□□□ 0.26
SMARCAL1-209ENST00000444508 ABHD11Q8NFV4 315 aa16.67■□□□□ 0.26
SMARCAL1-209ENST00000444508 RHEBL1Q8TAI7 183 aa16.67■□□□□ 0.26
SMARCAL1-209ENST00000444508 NEIL2Q969S2 332 aa16.67■□□□□ 0.26
SMARCAL1-209ENST00000444508 MTBPQ96DY7 904 aa16.67■□□□□ 0.26
SMARCAL1-209ENST00000444508 THAP11Q96EK4 314 aa16.67■□□□□ 0.26
SMARCAL1-209ENST00000444508 CABS1Q96KC9 395 aa16.67■□□□□ 0.26
SMARCAL1-209ENST00000444508 EPB41L4BQ9H329 900 aa16.67■□□□□ 0.26
SMARCAL1-209ENST00000444508 ACTL8Q9H568 366 aa16.67■□□□□ 0.26
SMARCAL1-209ENST00000444508 IFT80Q9P2H3 777 aaPredicted RBP16.67■□□□□ 0.26
SMARCAL1-209ENST00000444508 PSMC3IPQ9P2W1 217 aaPredicted RBP16.67■□□□□ 0.26
SMARCAL1-209ENST00000444508 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.67■□□□□ 0.26
SMARCAL1-209ENST00000444508 V9GYY5 206 aaPredicted RBP16.67■□□□□ 0.26
SMARCAL1-209ENST00000444508 MGAQ8IWI9 3026 aa16.67■□□□□ 0.26
SMARCAL1-209ENST00000444508 KCNE1BA0A087WTH5 132 aa16.66■□□□□ 0.26
SMARCAL1-209ENST00000444508 IQANK1A0A1B0GTG1 560 aa16.66■□□□□ 0.26
SMARCAL1-209ENST00000444508 NKX2-8O15522 239 aa16.66■□□□□ 0.26
SMARCAL1-209ENST00000444508 CREG1O75629 220 aa16.66■□□□□ 0.26
SMARCAL1-209ENST00000444508 STK16O75716 305 aa16.66■□□□□ 0.26
SMARCAL1-209ENST00000444508 CD63P08962 238 aa16.66■□□□□ 0.26
SMARCAL1-209ENST00000444508 PRKAR1AP10644 381 aa16.66■□□□□ 0.26
SMARCAL1-209ENST00000444508 GCAP28676 217 aa16.66■□□□□ 0.26
SMARCAL1-209ENST00000444508 GGT5P36269 586 aa16.66■□□□□ 0.26
SMARCAL1-209ENST00000444508 GDF5P43026 501 aa16.66■□□□□ 0.26
SMARCAL1-209ENST00000444508 MAGEA12P43365 314 aa16.66■□□□□ 0.26
SMARCAL1-209ENST00000444508 EMP3P54852 163 aa16.66■□□□□ 0.26
SMARCAL1-209ENST00000444508 COL9A2Q14055 689 aaPredicted RBP16.66■□□□□ 0.26
SMARCAL1-209ENST00000444508 NCF4Q15080 339 aa16.66■□□□□ 0.26
SMARCAL1-209ENST00000444508 PRTGQ2VWP7 1150 aa16.66■□□□□ 0.26
SMARCAL1-209ENST00000444508 NKAIN1Q4KMZ8 207 aa16.66■□□□□ 0.26
SMARCAL1-209ENST00000444508 MLIPQ5VWP3 458 aa16.66■□□□□ 0.26
SMARCAL1-209ENST00000444508 WDR93Q6P2C0 686 aa16.66■□□□□ 0.26
SMARCAL1-209ENST00000444508 C16orf46Q6P387 395 aa16.66■□□□□ 0.26
SMARCAL1-209ENST00000444508 FAM198BQ6UWH4 519 aa16.66■□□□□ 0.26
SMARCAL1-209ENST00000444508 IGSF10Q6WRI0 2623 aa16.66■□□□□ 0.26
SMARCAL1-209ENST00000444508 ENDOVQ8N8Q3 282 aaKnown RBP16.66■□□□□ 0.26
SMARCAL1-209ENST00000444508 ATOH8Q96SQ7 321 aa16.66■□□□□ 0.26
SMARCAL1-209ENST00000444508 RUFY1Q96T51 708 aa16.66■□□□□ 0.26
SMARCAL1-209ENST00000444508 TMEM79Q9BSE2 394 aa16.66■□□□□ 0.26
SMARCAL1-209ENST00000444508 CAPS2Q9BXY5 557 aa16.66■□□□□ 0.26
SMARCAL1-209ENST00000444508 PELI2Q9HAT8 420 aa16.66■□□□□ 0.26
SMARCAL1-209ENST00000444508 PADI2Q9Y2J8 665 aa16.66■□□□□ 0.26
SMARCAL1-209ENST00000444508 FEZF1A0PJY2 475 aa16.65■□□□□ 0.26
SMARCAL1-209ENST00000444508 UBXN8O00124 270 aa16.65■□□□□ 0.26
SMARCAL1-209ENST00000444508 TAPBPO15533 448 aa16.65■□□□□ 0.26
SMARCAL1-209ENST00000444508 COL6A2P12110 1019 aa16.65■□□□□ 0.26
SMARCAL1-209ENST00000444508 GNAZP19086 355 aa16.65■□□□□ 0.26
SMARCAL1-209ENST00000444508 BCL6P41182 706 aa16.65■□□□□ 0.26
SMARCAL1-209ENST00000444508 KCNC1P48547 511 aa16.65■□□□□ 0.26
SMARCAL1-209ENST00000444508 HSPA7P48741 367 aa16.65■□□□□ 0.26
SMARCAL1-209ENST00000444508 CYP4F2P78329 520 aa16.65■□□□□ 0.26
SMARCAL1-209ENST00000444508 MEF2AQ02078 507 aaPredicted RBP16.65■□□□□ 0.26
SMARCAL1-209ENST00000444508 CDC20Q12834 499 aa16.65■□□□□ 0.26
SMARCAL1-209ENST00000444508 CDC16Q13042 620 aa16.65■□□□□ 0.26
SMARCAL1-209ENST00000444508 TSNAXIP1Q2TAA8 658 aa16.65■□□□□ 0.26
SMARCAL1-209ENST00000444508 HKDC1Q2TB90 917 aa16.65■□□□□ 0.26
SMARCAL1-209ENST00000444508 CRTC2Q53ET0 693 aaPredicted RBP16.65■□□□□ 0.26
SMARCAL1-209ENST00000444508 CATSPEREQ5SY80 951 aa16.65■□□□□ 0.26
SMARCAL1-209ENST00000444508 GARNL3Q5VVW2 1013 aa16.65■□□□□ 0.26
SMARCAL1-209ENST00000444508 NXPE4Q6UWF7 544 aa16.65■□□□□ 0.26
SMARCAL1-209ENST00000444508 TMPRSS11BQ86T26 416 aa16.65■□□□□ 0.26
SMARCAL1-209ENST00000444508 SYVN1Q86TM6 617 aa16.65■□□□□ 0.26
SMARCAL1-209ENST00000444508 SNX31Q8N9S9 440 aa16.65■□□□□ 0.26
SMARCAL1-209ENST00000444508 OR4K1Q8NGD4 311 aa16.65■□□□□ 0.26
SMARCAL1-209ENST00000444508 AIF1LQ9BQI0 150 aa16.65■□□□□ 0.26
SMARCAL1-209ENST00000444508 SYNPO2LQ9H987 977 aa16.65■□□□□ 0.26
SMARCAL1-209ENST00000444508 PPCSQ9HAB8 311 aa16.65■□□□□ 0.26
SMARCAL1-209ENST00000444508 DNAJC11Q9NVH1 559 aa16.65■□□□□ 0.26
SMARCAL1-209ENST00000444508 PTBP2Q9UKA9 531 aaKnown RBP16.65■□□□□ 0.26
SMARCAL1-209ENST00000444508 RUVBL1Q9Y265 456 aaKnown RBP16.65■□□□□ 0.26
SMARCAL1-209ENST00000444508 TRBC2A0A5B9 178 aa16.64■□□□□ 0.25
SMARCAL1-209ENST00000444508 CLGNO14967 610 aa16.64■□□□□ 0.25
SMARCAL1-209ENST00000444508 OR1F1O43749 312 aa16.64■□□□□ 0.25
SMARCAL1-209ENST00000444508 CCNT2O60583 730 aaKnown RBP16.64■□□□□ 0.25
SMARCAL1-209ENST00000444508 RECKO95980 971 aa16.64■□□□□ 0.25
SMARCAL1-209ENST00000444508 ITGB2P05107 769 aa16.64■□□□□ 0.25
SMARCAL1-209ENST00000444508 CAPN1P07384 714 aa16.64■□□□□ 0.25
SMARCAL1-209ENST00000444508 RBP1P09455 135 aa16.64■□□□□ 0.25
SMARCAL1-209ENST00000444508 GFAPP14136 432 aa16.64■□□□□ 0.25
SMARCAL1-209ENST00000444508 RPS18P62269 152 aaKnown RBP16.64■□□□□ 0.25
SMARCAL1-209ENST00000444508 ERV3-1Q14264 604 aa16.64■□□□□ 0.25
SMARCAL1-209ENST00000444508 SLC9A5Q14940 896 aa16.64■□□□□ 0.25
SMARCAL1-209ENST00000444508 PDK4Q16654 411 aa16.64■□□□□ 0.25
SMARCAL1-209ENST00000444508 NDUFA9Q16795 377 aa16.64■□□□□ 0.25
SMARCAL1-209ENST00000444508 ERCC6LQ2NKX8 1250 aa16.64■□□□□ 0.25
SMARCAL1-209ENST00000444508 FBXO48Q5FWF7 155 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms