RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 ZNF461Q8TAF7 563 aa18.35■□□□□ 0.53
PMPCB-204ENST00000444457 NUDT8Q8WV74 236 aa18.35■□□□□ 0.53
PMPCB-204ENST00000444457 PHOX2BQ99453 314 aa18.35■□□□□ 0.53
PMPCB-204ENST00000444457 BARD1Q99728 777 aaKnown RBP18.35■□□□□ 0.53
PMPCB-204ENST00000444457 THUMPD3Q9BV44 507 aaKnown RBP18.35■□□□□ 0.53
PMPCB-204ENST00000444457 HMX1Q9NP08 348 aaPredicted RBP18.35■□□□□ 0.53
PMPCB-204ENST00000444457 RPRD1BQ9NQG5 326 aaKnown RBP18.35■□□□□ 0.53
PMPCB-204ENST00000444457 STMN3Q9NZ72 180 aa18.35■□□□□ 0.53
PMPCB-204ENST00000444457 HECAQ9UBI9 543 aaPredicted RBP18.35■□□□□ 0.53
PMPCB-204ENST00000444457 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.35■□□□□ 0.53
PMPCB-204ENST00000444457 TRAPPC4Q9Y296 219 aa18.35■□□□□ 0.53
PMPCB-204ENST00000444457 CREG1O75629 220 aa18.34■□□□□ 0.53
PMPCB-204ENST00000444457 CAPN1P07384 714 aa18.34■□□□□ 0.53
PMPCB-204ENST00000444457 ALPIP09923 528 aa18.34■□□□□ 0.53
PMPCB-204ENST00000444457 ITGA2P17301 1181 aa18.34■□□□□ 0.53
PMPCB-204ENST00000444457 GRK5P34947 590 aa18.34■□□□□ 0.53
PMPCB-204ENST00000444457 MAGEA2P43356 314 aa18.34■□□□□ 0.53
PMPCB-204ENST00000444457 PLIN5Q00G26 463 aa18.34■□□□□ 0.53
PMPCB-204ENST00000444457 ARHGEF6Q15052 776 aa18.34■□□□□ 0.53
PMPCB-204ENST00000444457 GOLGA7Q7Z5G4 137 aa18.34■□□□□ 0.53
PMPCB-204ENST00000444457 NOXA1Q86UR1 476 aa18.34■□□□□ 0.53
PMPCB-204ENST00000444457 TRMT2BQ96GJ1 504 aaKnown RBP18.34■□□□□ 0.53
PMPCB-204ENST00000444457 MYO19Q96H55 970 aa18.34■□□□□ 0.53
PMPCB-204ENST00000444457 HHIPL1Q96JK4 782 aa18.34■□□□□ 0.53
PMPCB-204ENST00000444457 C14orf119Q9NWQ9 140 aa18.34■□□□□ 0.53
PMPCB-204ENST00000444457 A0A0G2JMP0 313 aa18.34■□□□□ 0.53
PMPCB-204ENST00000444457 PITPNM1O00562 1244 aa18.34■□□□□ 0.53
PMPCB-204ENST00000444457 ABLIM3O94929 683 aa18.34■□□□□ 0.53
PMPCB-204ENST00000444457 FKBP9O95302 570 aa18.34■□□□□ 0.53
PMPCB-204ENST00000444457 PRKACBP22694 351 aa18.34■□□□□ 0.53
PMPCB-204ENST00000444457 UGT2B15P54855 530 aa18.34■□□□□ 0.53
PMPCB-204ENST00000444457 TIGD6Q17RP2 521 aa18.34■□□□□ 0.53
PMPCB-204ENST00000444457 ARMC12Q5T9G4 340 aa18.34■□□□□ 0.53
PMPCB-204ENST00000444457 IL27RAQ6UWB1 636 aa18.34■□□□□ 0.53
PMPCB-204ENST00000444457 CERS6Q6ZMG9 384 aa18.34■□□□□ 0.53
PMPCB-204ENST00000444457 RAB43Q86YS6 212 aa18.34■□□□□ 0.53
PMPCB-204ENST00000444457 CCDC71Q8IV32 467 aaPredicted RBP18.34■□□□□ 0.53
PMPCB-204ENST00000444457 CCDC28AQ8IWP9 274 aa18.34■□□□□ 0.53
PMPCB-204ENST00000444457 TTC29Q8NA56 475 aaPredicted RBP18.34■□□□□ 0.53
PMPCB-204ENST00000444457 METTL6Q8TCB7 284 aa18.34■□□□□ 0.53
PMPCB-204ENST00000444457 POP5Q969H6 163 aaKnown RBP18.34■□□□□ 0.53
PMPCB-204ENST00000444457 NEDD4LQ96PU5 975 aa18.34■□□□□ 0.53
PMPCB-204ENST00000444457 PRDM8Q9NQV8 689 aa18.34■□□□□ 0.53
PMPCB-204ENST00000444457 TNPO3Q9Y5L0 923 aaKnown RBP18.34■□□□□ 0.53
PMPCB-204ENST00000444457 OR51B4Q9Y5P0 310 aa18.34■□□□□ 0.53
PMPCB-204ENST00000444457 ARHGAP33O14559 1287 aa18.33■□□□□ 0.53
PMPCB-204ENST00000444457 UGT2B17O75795 530 aa18.33■□□□□ 0.53
PMPCB-204ENST00000444457 SERPINA1P01009 418 aa18.33■□□□□ 0.53
PMPCB-204ENST00000444457 HOXA9P31269 272 aa18.33■□□□□ 0.53
PMPCB-204ENST00000444457 CSKP41240 450 aa18.33■□□□□ 0.53
PMPCB-204ENST00000444457 IL1RL1Q01638 556 aa18.33■□□□□ 0.53
PMPCB-204ENST00000444457 FAM151BQ6UXP7 276 aa18.33■□□□□ 0.53
PMPCB-204ENST00000444457 CEP68Q76N32 757 aa18.33■□□□□ 0.53
PMPCB-204ENST00000444457 WFDC5Q8TCV5 224 aa18.33■□□□□ 0.53
PMPCB-204ENST00000444457 APH1BQ8WW43 257 aa18.33■□□□□ 0.53
PMPCB-204ENST00000444457 PIH1D2Q8WWB5 315 aa18.33■□□□□ 0.53
PMPCB-204ENST00000444457 SLC13A3Q8WWT9 602 aa18.33■□□□□ 0.53
PMPCB-204ENST00000444457 NCLNQ969V3 563 aa18.33■□□□□ 0.53
PMPCB-204ENST00000444457 IGSF21Q96ID5 467 aa18.33■□□□□ 0.53
PMPCB-204ENST00000444457 TBCDQ9BTW9 1192 aa18.33■□□□□ 0.53
PMPCB-204ENST00000444457 TRIM39Q9HCM9 518 aa18.33■□□□□ 0.53
PMPCB-204ENST00000444457 WDR70Q9NW82 654 aa18.33■□□□□ 0.53
PMPCB-204ENST00000444457 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.33■□□□□ 0.53
PMPCB-204ENST00000444457 PCDHGB2Q9Y5G2 931 aa18.33■□□□□ 0.53
PMPCB-204ENST00000444457 ZNF106Q9H2Y7 1883 aaKnown RBP18.33■□□□□ 0.53
PMPCB-204ENST00000444457 MICAL3Q7RTP6 2002 aa18.33■□□□□ 0.52
PMPCB-204ENST00000444457 KRT87PA6NCN2 255 aa18.33■□□□□ 0.52
PMPCB-204ENST00000444457 OR7A17O14581 309 aa18.33■□□□□ 0.52
PMPCB-204ENST00000444457 RECQL5O94762 991 aaPredicted RBP18.33■□□□□ 0.52
PMPCB-204ENST00000444457 PIK3CBP42338 1070 aa18.33■□□□□ 0.52
PMPCB-204ENST00000444457 SMAD3P84022 425 aaKnown RBP18.33■□□□□ 0.52
PMPCB-204ENST00000444457 GTF2H2Q13888 395 aa18.33■□□□□ 0.52
PMPCB-204ENST00000444457 AAK1Q2M2I8 961 aa18.33■□□□□ 0.52
PMPCB-204ENST00000444457 CARD16Q5EG05 197 aa18.33■□□□□ 0.52
PMPCB-204ENST00000444457 PTRHD1Q6GMV3 140 aaKnown RBP18.33■□□□□ 0.52
PMPCB-204ENST00000444457 GTF2H2CQ6P1K8 395 aa18.33■□□□□ 0.52
PMPCB-204ENST00000444457 SNX20Q7Z614 316 aa18.33■□□□□ 0.52
PMPCB-204ENST00000444457 SERPINA9Q86WD7 417 aa18.33■□□□□ 0.52
PMPCB-204ENST00000444457 MSRB3Q8IXL7 192 aa18.33■□□□□ 0.52
PMPCB-204ENST00000444457 HJURPQ8NCD3 748 aaPredicted RBP18.33■□□□□ 0.52
PMPCB-204ENST00000444457 OR4F6Q8NGB9 312 aa18.33■□□□□ 0.52
PMPCB-204ENST00000444457 GTF2H4Q92759 462 aa18.33■□□□□ 0.52
PMPCB-204ENST00000444457 SCLYQ96I15 445 aa18.33■□□□□ 0.52
PMPCB-204ENST00000444457 HBEGFQ99075 208 aa18.33■□□□□ 0.52
PMPCB-204ENST00000444457 GON7Q9BXV9 100 aa18.33■□□□□ 0.52
PMPCB-204ENST00000444457 TM6SF2Q9BZW4 377 aa18.33■□□□□ 0.52
PMPCB-204ENST00000444457 CIPCQ9C0C6 399 aa18.33■□□□□ 0.52
PMPCB-204ENST00000444457 RUBCNLQ9H714 662 aa18.33■□□□□ 0.52
PMPCB-204ENST00000444457 PIKFYVEQ9Y2I7 2098 aa18.33■□□□□ 0.52
PMPCB-204ENST00000444457 GAPDHSO14556 408 aaPredicted RBP18.32■□□□□ 0.52
PMPCB-204ENST00000444457 FFAR2O15552 330 aa18.32■□□□□ 0.52
PMPCB-204ENST00000444457 PRAMEF1O95521 474 aa18.32■□□□□ 0.52
PMPCB-204ENST00000444457 MYCP01106 439 aaPredicted RBP18.32■□□□□ 0.52
PMPCB-204ENST00000444457 DNTTP04053 509 aa18.32■□□□□ 0.52
PMPCB-204ENST00000444457 ZNF7P17097 686 aaPredicted RBP18.32■□□□□ 0.52
PMPCB-204ENST00000444457 NUDT1P36639 197 aa18.32■□□□□ 0.52
PMPCB-204ENST00000444457 AP1S1P61966 158 aa18.32■□□□□ 0.52
PMPCB-204ENST00000444457 CSNK2BP67870 215 aa18.32■□□□□ 0.52
PMPCB-204ENST00000444457 FCHO2Q0JRZ9 810 aa18.32■□□□□ 0.52
PMPCB-204ENST00000444457 LAPTM4AQ15012 233 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms