RNA–Protein interactions for RNA: ENST00000444409.1

AP001062.3-202, humanhuman

TSL 2 BASIC

Gene AP001062.3, Length 619 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001062.3-202ENST00000444409 MLLT10P55197 1068 aa13□□□□□ -0.33
AP001062.3-202ENST00000444409 RPS15AP62244 130 aaKnown RBP13□□□□□ -0.33
AP001062.3-202ENST00000444409 CSNK1G2P78368 415 aa13□□□□□ -0.33
AP001062.3-202ENST00000444409 KLC1Q07866 573 aa13□□□□□ -0.33
AP001062.3-202ENST00000444409 AIMP2Q13155 320 aaKnown RBP13□□□□□ -0.33
AP001062.3-202ENST00000444409 RAPSNQ13702 412 aa13□□□□□ -0.33
AP001062.3-202ENST00000444409 FAM53BQ14153 422 aa13□□□□□ -0.33
AP001062.3-202ENST00000444409 CAPN13Q6MZZ7 669 aaPredicted RBP13□□□□□ -0.33
AP001062.3-202ENST00000444409 KIRREL2Q6UWL6 708 aa13□□□□□ -0.33
AP001062.3-202ENST00000444409 LCTLQ6UWM7 567 aa13□□□□□ -0.33
AP001062.3-202ENST00000444409 SBSNQ6UWP8 590 aa13□□□□□ -0.33
AP001062.3-202ENST00000444409 TMEM207Q6UWW9 146 aa13□□□□□ -0.33
AP001062.3-202ENST00000444409 VN1R4Q7Z5H5 301 aa13□□□□□ -0.33
AP001062.3-202ENST00000444409 C17orf64Q86WR6 236 aa13□□□□□ -0.33
AP001062.3-202ENST00000444409 AMER3Q8N944 861 aa13□□□□□ -0.33
AP001062.3-202ENST00000444409 OR56A3Q8NH54 315 aa13□□□□□ -0.33
AP001062.3-202ENST00000444409 PYROXD1Q8WU10 500 aa13□□□□□ -0.33
AP001062.3-202ENST00000444409 MIB2Q96AX9 1013 aa13□□□□□ -0.33
AP001062.3-202ENST00000444409 MIEF2Q96C03 454 aa13□□□□□ -0.33
AP001062.3-202ENST00000444409 CRB3Q9BUF7 120 aa13□□□□□ -0.33
AP001062.3-202ENST00000444409 TRIM54Q9BYV2 358 aa13□□□□□ -0.33
AP001062.3-202ENST00000444409 DRC3Q9H069 523 aa13□□□□□ -0.33
AP001062.3-202ENST00000444409 ZNF552Q9H707 407 aaPredicted RBP13□□□□□ -0.33
AP001062.3-202ENST00000444409 ATP13A2Q9NQ11 1180 aa13□□□□□ -0.33
AP001062.3-202ENST00000444409 ARL15Q9NXU5 204 aa13□□□□□ -0.33
AP001062.3-202ENST00000444409 NSMCE4AQ9NXX6 385 aa13□□□□□ -0.33
AP001062.3-202ENST00000444409 FBXL4Q9UKA2 621 aa13□□□□□ -0.33
AP001062.3-202ENST00000444409 IKZF3Q9UKT9 509 aa13□□□□□ -0.33
AP001062.3-202ENST00000444409 NOVA2Q9UNW9 492 aaKnown RBP13□□□□□ -0.33
AP001062.3-202ENST00000444409 PABPN1LA6NDY0 278 aaKnown RBP12.99□□□□□ -0.33
AP001062.3-202ENST00000444409 KLHL41O60662 606 aa12.99□□□□□ -0.33
AP001062.3-202ENST00000444409 ALPPP05187 535 aa12.99□□□□□ -0.33
AP001062.3-202ENST00000444409 NPPBP16860 134 aa12.99□□□□□ -0.33
AP001062.3-202ENST00000444409 CD97P48960 835 aa12.99□□□□□ -0.33
AP001062.3-202ENST00000444409 TAS2R39P59534 338 aa12.99□□□□□ -0.33
AP001062.3-202ENST00000444409 ILF2Q12905 390 aaKnown RBP12.99□□□□□ -0.33
AP001062.3-202ENST00000444409 RBBP7Q16576 425 aa12.99□□□□□ -0.33
AP001062.3-202ENST00000444409 PPP1R3AQ16821 1122 aa12.99□□□□□ -0.33
AP001062.3-202ENST00000444409 VWA2Q5GFL6 755 aa12.99□□□□□ -0.33
AP001062.3-202ENST00000444409 JMJD6Q6NYC1 403 aaPredicted RBP12.99□□□□□ -0.33
AP001062.3-202ENST00000444409 IGFL3Q6UXB1 125 aa12.99□□□□□ -0.33
AP001062.3-202ENST00000444409 ZNF572Q7Z3I7 529 aaPredicted RBP12.99□□□□□ -0.33
AP001062.3-202ENST00000444409 NKAPQ8N5F7 415 aaKnown RBP12.99□□□□□ -0.33
AP001062.3-202ENST00000444409 RBMXL3Q8N7X1 1067 aaKnown RBP12.99□□□□□ -0.33
AP001062.3-202ENST00000444409 OR11G2Q8NGC1 345 aa12.99□□□□□ -0.33
AP001062.3-202ENST00000444409 ATL1Q8WXF7 558 aa12.99□□□□□ -0.33
AP001062.3-202ENST00000444409 ANKRD7Q92527 254 aa12.99□□□□□ -0.33
AP001062.3-202ENST00000444409 FBXL8Q96CD0 374 aa12.99□□□□□ -0.33
AP001062.3-202ENST00000444409 THAP11Q96EK4 314 aa12.99□□□□□ -0.33
AP001062.3-202ENST00000444409 MMABQ96EY8 250 aaPredicted RBP12.99□□□□□ -0.33
AP001062.3-202ENST00000444409 HAUS8Q9BT25 410 aa12.99□□□□□ -0.33
AP001062.3-202ENST00000444409 PHACTR1Q9C0D0 580 aa12.99□□□□□ -0.33
AP001062.3-202ENST00000444409 RHOJQ9H4E5 214 aa12.99□□□□□ -0.33
AP001062.3-202ENST00000444409 SAYSD1Q9NPB0 183 aa12.99□□□□□ -0.33
AP001062.3-202ENST00000444409 SMYD2Q9NRG4 433 aa12.99□□□□□ -0.33
AP001062.3-202ENST00000444409 TRPC4Q9UBN4 977 aa12.99□□□□□ -0.33
AP001062.3-202ENST00000444409 PLAAQ9Y263 795 aa12.99□□□□□ -0.33
AP001062.3-202ENST00000444409 MAP4K5Q9Y4K4 846 aa12.99□□□□□ -0.33
AP001062.3-202ENST00000444409 A0A0A6YYC8 382 aaPredicted RBP12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 TTLL8A6PVC2 850 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 I3L1I5 382 aaPredicted RBP12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 PIAS1O75925 651 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 IPO13O94829 963 aaKnown RBP12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 CDH1P12830 882 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 SAT1P21673 171 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 SSTR1P30872 391 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 BCL6P41182 706 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 SNRPNP63162 240 aaKnown RBP12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 ZNF460Q14592 562 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 NDUFA9Q16795 377 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 TUBB8Q3ZCM7 444 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 ATG9BQ674R7 924 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 SLC6A19Q695T7 634 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 CAPN12Q6ZSI9 719 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 CYS1Q717R9 158 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 LAPTM4BQ86VI4 370 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 PRSS58Q8IYP2 241 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 Q8NA96 180 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 ABHD11Q8NFV4 315 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 PNPLA2Q96AD5 504 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 ALKBH8Q96BT7 664 aaKnown RBP12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 PYCR2Q96C36 320 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 TM4SF19Q96DZ7 209 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 VPS39Q96JC1 886 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 VPS50Q96JG6 964 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 OR4K3Q96R72 315 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 MESP1Q9BRJ9 268 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 SARGQ9BW04 601 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 FAM129AQ9BZQ8 928 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 TGIF2Q9GZN2 237 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 RAB17Q9H0T7 212 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 POPDC3Q9HBV1 291 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 MKKSQ9NPJ1 570 aaPredicted RBP12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 C14orf105Q9NVL8 296 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 C3orf18Q9UK00 162 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 MRPS2Q9Y399 296 aaKnown RBP12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 UTP11Q9Y3A2 253 aaKnown RBP12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 LRRK2Q5S007 2527 aa12.98□□□□□ -0.33
AP001062.3-202ENST00000444409 TCRBV9S1A1TA0A576 114 aa12.97□□□□□ -0.33
AP001062.3-202ENST00000444409 FEZF1A0PJY2 475 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms