RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 OR5K3A6NET4 321 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 C2orf81A6NN90 581 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 KRTAP9-7A8MTY7 169 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 C17orf105B2RV13 164 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 XPO1O14980 1071 aaKnown RBP4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 ITM2AO43736 263 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 NME2P1O60361 137 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 LDB3O75112 727 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 TOM1L1O75674 476 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 SURF6O75683 361 aaKnown RBP4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 BMP10O95393 424 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 CLUP10909 449 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 CEACAM1P13688 526 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 CD59P13987 128 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 CPA3P15088 417 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 DGKAP23743 735 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 PTPN6P29350 595 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 ADRA1AP35348 466 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 TNFRSF4P43489 277 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 DDX39BQ13838 428 aaKnown RBP4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 NONOQ15233 471 aaKnown RBP eCLIP4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 INPP5JQ15735 1006 aaPredicted RBP4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 RBBP7Q16576 425 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 STX1AQ16623 288 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 PARM1Q6UWI2 310 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 TTLL10Q6ZVT0 673 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 CENPLQ8N0S6 344 aaPredicted RBP4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 OR4K1Q8NGD4 311 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 MAGEC3Q8TD91 643 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 GANCQ8TET4 914 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 U2AF1L4Q8WU68 220 aaKnown RBP4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 SLC38A5Q8WUX1 472 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 PGM2Q96G03 612 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 GPR137Q96N19 417 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 TTC25Q96NG3 672 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 MTERF1Q99551 399 aaKnown RBP4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 MRPL13Q9BYD1 178 aaKnown RBP4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 KRTAP4-5Q9BYR2 181 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 PRRG4Q9BZD6 226 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 VAT1LQ9HCJ6 419 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 FARSBQ9NSD9 589 aaKnown RBP4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 PSORS1C1Q9UIG5 152 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 WDR17Q8IZU2 1322 aa4.91□□□□□ -1.62
TM9SF3-202ENST00000443638 A0A0G2JPF8 293 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 CTAGE15A4D2H0 777 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 C5orf60A6NFR6 353 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 HNRNPCL3B7ZW38 293 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 MAPK13O15264 365 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 VPS26AO75436 327 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 BAG3O95817 575 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 GAS8O95995 478 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 CHRNGP07510 517 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 CTAGE8P0CG41 777 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 HNRNPCL4P0DMR1 293 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 HSPA8P11142 646 aaKnown RBP4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 LMO1P25800 156 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 MARCKSP29966 332 aaPredicted RBP4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 SSTR1P30872 391 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 CCL11P51671 97 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 VAMP7P51809 220 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 EEF1A2Q05639 463 aaKnown RBP4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 SLC3A1Q07837 685 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 SNX1Q13596 522 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 HNF4GQ14541 408 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 ADPRMQ3LIE5 342 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 HECTD2Q5U5R9 776 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 NCR3LG1Q68D85 454 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 CTAGE6Q86UF2 777 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 MISPQ8IVT2 679 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 CTAGE4Q8IX94 777 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 THEM5Q8N1Q8 247 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 PPFIBP2Q8ND30 876 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 OR10Q1Q8NGQ4 319 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 METTL21AQ8WXB1 218 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 AZIN2Q96A70 460 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 RFT1Q96AA3 541 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 TMEM19Q96HH6 336 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 PIWIL1Q96J94 861 aaKnown RBP4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 CFAP53Q96M91 514 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 C8orf49Q96NF6 230 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 GUCD1Q96NT3 240 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 ZBTB18Q99592 522 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 NDNQ99608 321 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 C10orf88Q9H8K7 445 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 UPF2Q9HAU5 1272 aaKnown RBP4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 TRPV5Q9NQA5 729 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 HOMER3Q9NSC5 361 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 RBM28Q9NW13 759 aaKnown RBP4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 RAI14Q9P0K7 980 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 NPC1L1Q9UHC9 1359 aa4.9□□□□□ -1.63
TM9SF3-202ENST00000443638 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 C15orf38-AP3S2A0A0A6YYH1 394 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 IGHV4-28A0A0C4DH34 117 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 ANKRD66B4E2M5 251 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 GAPDHSO14556 408 aaPredicted RBP4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 GRID2O43424 1007 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 BUD23O43709 281 aaKnown RBP4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 RHOBTB1O94844 696 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 LATS1O95835 1130 aa4.89□□□□□ -1.63
TM9SF3-202ENST00000443638 ASNSP08243 561 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms