RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 HEBP2Q9Y5Z4 205 aa18.05■□□□□ 0.48
POLR1E-203ENST00000442009 GON4LQ3T8J9 2241 aa18.05■□□□□ 0.48
POLR1E-203ENST00000442009 SNRNP200O75643 2136 aaKnown RBP18.05■□□□□ 0.48
POLR1E-203ENST00000442009 PRAMEF33A0A0G2JMD5 474 aa18.05■□□□□ 0.48
POLR1E-203ENST00000442009 H3BNX3 289 aa18.05■□□□□ 0.48
POLR1E-203ENST00000442009 TCN1P20061 433 aaPredicted RBP18.05■□□□□ 0.48
POLR1E-203ENST00000442009 PTDSS1P48651 473 aaKnown RBP18.05■□□□□ 0.48
POLR1E-203ENST00000442009 ACSM2AQ08AH3 577 aa18.05■□□□□ 0.48
POLR1E-203ENST00000442009 SPIN4Q56A73 249 aa18.05■□□□□ 0.48
POLR1E-203ENST00000442009 ACSM2BQ68CK6 577 aa18.05■□□□□ 0.48
POLR1E-203ENST00000442009 DHDDSQ86SQ9 333 aa18.05■□□□□ 0.48
POLR1E-203ENST00000442009 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.05■□□□□ 0.48
POLR1E-203ENST00000442009 RAB42Q8N4Z0 105 aa18.05■□□□□ 0.48
POLR1E-203ENST00000442009 DEFB123Q8N688 67 aa18.05■□□□□ 0.48
POLR1E-203ENST00000442009 DNAJB14Q8TBM8 379 aa18.05■□□□□ 0.48
POLR1E-203ENST00000442009 NRG4Q8WWG1 115 aa18.05■□□□□ 0.48
POLR1E-203ENST00000442009 PYDC1Q8WXC3 89 aa18.05■□□□□ 0.48
POLR1E-203ENST00000442009 TWSG1Q9GZX9 223 aa18.05■□□□□ 0.48
POLR1E-203ENST00000442009 PCDHAC1Q9H158 963 aa18.05■□□□□ 0.48
POLR1E-203ENST00000442009 NT5DC2Q9H857 520 aa18.05■□□□□ 0.48
POLR1E-203ENST00000442009 CUEDC1Q9NWM3 386 aaPredicted RBP18.05■□□□□ 0.48
POLR1E-203ENST00000442009 ZNF624Q9P2J8 865 aaPredicted RBP18.05■□□□□ 0.48
POLR1E-203ENST00000442009 GMPR2Q9P2T1 348 aaKnown RBP18.05■□□□□ 0.48
POLR1E-203ENST00000442009 STOML1Q9UBI4 398 aa18.05■□□□□ 0.48
POLR1E-203ENST00000442009 BCAP29Q9UHQ4 241 aa18.05■□□□□ 0.48
POLR1E-203ENST00000442009 A0A1W2PPC4 97 aa18.04■□□□□ 0.48
POLR1E-203ENST00000442009 TBX6O95947 436 aaPredicted RBP18.04■□□□□ 0.48
POLR1E-203ENST00000442009 PRPS1L1P21108 318 aa18.04■□□□□ 0.48
POLR1E-203ENST00000442009 PSMB5P28074 263 aa18.04■□□□□ 0.48
POLR1E-203ENST00000442009 PRDX1Q06830 199 aaKnown RBP18.04■□□□□ 0.48
POLR1E-203ENST00000442009 MTAPQ13126 283 aa18.04■□□□□ 0.48
POLR1E-203ENST00000442009 RABL3Q5HYI8 236 aa18.04■□□□□ 0.48
POLR1E-203ENST00000442009 ARMCX6Q7L4S7 300 aa18.04■□□□□ 0.48
POLR1E-203ENST00000442009 RD3Q7Z3Z2 195 aa18.04■□□□□ 0.48
POLR1E-203ENST00000442009 C1orf52Q8N6N3 182 aaKnown RBP18.04■□□□□ 0.48
POLR1E-203ENST00000442009 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.04■□□□□ 0.489e-7■■■□□ 17.5
POLR1E-203ENST00000442009 PITHD1Q9GZP4 211 aaPredicted RBP18.04■□□□□ 0.48
POLR1E-203ENST00000442009 XKR8Q9H6D3 395 aa18.04■□□□□ 0.48
POLR1E-203ENST00000442009 SERHLQ9NQF3 203 aa18.04■□□□□ 0.48
POLR1E-203ENST00000442009 NMRK1Q9NWW6 199 aa18.04■□□□□ 0.48
POLR1E-203ENST00000442009 PLXND1Q9Y4D7 1925 aa18.04■□□□□ 0.48
POLR1E-203ENST00000442009 TRBV5-3A0A0A0MS03 114 aa18.03■□□□□ 0.48
POLR1E-203ENST00000442009 ANP32DO95626 131 aa18.03■□□□□ 0.48
POLR1E-203ENST00000442009 CCR8P51685 355 aa18.03■□□□□ 0.48
POLR1E-203ENST00000442009 FXNQ16595 210 aa18.03■□□□□ 0.48
POLR1E-203ENST00000442009 MAPKAPK3Q16644 382 aa18.03■□□□□ 0.48
POLR1E-203ENST00000442009 ICE2Q659A1 982 aa18.03■□□□□ 0.48
POLR1E-203ENST00000442009 KRT78Q8N1N4 520 aa18.03■□□□□ 0.48
POLR1E-203ENST00000442009 HIPK4Q8NE63 616 aa18.03■□□□□ 0.48
POLR1E-203ENST00000442009 BHLHE22Q8NFJ8 381 aaPredicted RBP18.03■□□□□ 0.48
POLR1E-203ENST00000442009 RLN3Q8WXF3 142 aa18.03■□□□□ 0.48
POLR1E-203ENST00000442009 SH3KBP1Q96B97 665 aa18.03■□□□□ 0.48
POLR1E-203ENST00000442009 CGREF1Q99674 301 aa18.03■□□□□ 0.48
POLR1E-203ENST00000442009 EBPLQ9BY08 206 aa18.03■□□□□ 0.48
POLR1E-203ENST00000442009 MAN2B2Q9Y2E5 1009 aa18.03■□□□□ 0.48
POLR1E-203ENST00000442009 COLEC10Q9Y6Z7 277 aa18.03■□□□□ 0.48
POLR1E-203ENST00000442009 C15orf38-AP3S2A0A0A6YYH1 394 aa18.02■□□□□ 0.48
POLR1E-203ENST00000442009 IGKV1-8A0A0C4DH67 115 aa18.02■□□□□ 0.48
POLR1E-203ENST00000442009 SPTY2D1-AS1A0A0U1RR47 76 aa18.02■□□□□ 0.48
POLR1E-203ENST00000442009 C19orf67A6NJJ6 358 aa18.02■□□□□ 0.48
POLR1E-203ENST00000442009 KLHL18O94889 574 aa18.02■□□□□ 0.48
POLR1E-203ENST00000442009 NDUFS1P28331 727 aa18.02■□□□□ 0.48
POLR1E-203ENST00000442009 HNRNPFP52597 415 aaKnown RBP18.02■□□□□ 0.48
POLR1E-203ENST00000442009 EEFSECP57772 596 aaKnown RBP18.02■□□□□ 0.48
POLR1E-203ENST00000442009 REEP5Q00765 189 aa18.02■□□□□ 0.48
POLR1E-203ENST00000442009 SF1Q15637 639 aaKnown RBP18.02■□□□□ 0.48
POLR1E-203ENST00000442009 ARPINQ7Z6K5 226 aa18.02■□□□□ 0.48
POLR1E-203ENST00000442009 FAM160A2Q8N612 972 aaPredicted RBP18.02■□□□□ 0.48
POLR1E-203ENST00000442009 ANKRD53Q8N9V6 530 aa18.02■□□□□ 0.48
POLR1E-203ENST00000442009 GPBAR1Q8TDU6 330 aa18.02■□□□□ 0.48
POLR1E-203ENST00000442009 CLDN23Q96B33 292 aa18.02■□□□□ 0.48
POLR1E-203ENST00000442009 OR52E6Q96RD3 313 aa18.02■□□□□ 0.48
POLR1E-203ENST00000442009 TRIM8Q9BZR9 551 aa18.02■□□□□ 0.48
POLR1E-203ENST00000442009 PRDM6Q9NQX0 595 aa18.02■□□□□ 0.48
POLR1E-203ENST00000442009 ADGRE2Q9UHX3 823 aa18.02■□□□□ 0.48
POLR1E-203ENST00000442009 H7BY64 318 aa18.02■□□□□ 0.47
POLR1E-203ENST00000442009 RASGRP1O95267 797 aa18.02■□□□□ 0.47
POLR1E-203ENST00000442009 HOXB9P17482 250 aaPredicted RBP18.02■□□□□ 0.47
POLR1E-203ENST00000442009 CXCR2P25025 360 aa18.02■□□□□ 0.47
POLR1E-203ENST00000442009 PTX3P26022 381 aaPredicted RBP18.02■□□□□ 0.47
POLR1E-203ENST00000442009 PTPN6P29350 595 aa18.02■□□□□ 0.47
POLR1E-203ENST00000442009 CSNK1G2P78368 415 aa18.02■□□□□ 0.47
POLR1E-203ENST00000442009 EIF2B5Q13144 721 aaKnown RBP18.02■□□□□ 0.47
POLR1E-203ENST00000442009 KRT33BQ14525 404 aa18.02■□□□□ 0.47
POLR1E-203ENST00000442009 UGT8Q16880 541 aa18.02■□□□□ 0.47
POLR1E-203ENST00000442009 MSANTD1Q6ZTZ1 278 aa18.02■□□□□ 0.47
POLR1E-203ENST00000442009 PTRH1Q86Y79 214 aaKnown RBP18.02■□□□□ 0.47
POLR1E-203ENST00000442009 SYT12Q8IV01 421 aa18.02■□□□□ 0.47
POLR1E-203ENST00000442009 MSRB3Q8IXL7 192 aa18.02■□□□□ 0.47
POLR1E-203ENST00000442009 SIX5Q8N196 739 aa18.02■□□□□ 0.47
POLR1E-203ENST00000442009 METTL4Q8N3J2 472 aa18.02■□□□□ 0.47
POLR1E-203ENST00000442009 DNAJB8Q8NHS0 232 aa18.02■□□□□ 0.47
POLR1E-203ENST00000442009 PRAP1Q96NZ9 151 aa18.02■□□□□ 0.47
POLR1E-203ENST00000442009 AIF1LQ9BQI0 150 aa18.02■□□□□ 0.47
POLR1E-203ENST00000442009 TPSD1Q9BZJ3 242 aa18.02■□□□□ 0.47
POLR1E-203ENST00000442009 VAPAQ9P0L0 249 aa18.02■□□□□ 0.47
POLR1E-203ENST00000442009 FBXL21Q9UKT6 434 aa18.02■□□□□ 0.47
POLR1E-203ENST00000442009 ANGPTL2Q9UKU9 493 aa18.02■□□□□ 0.47
POLR1E-203ENST00000442009 PCDHB11Q9Y5F2 797 aa18.02■□□□□ 0.47
POLR1E-203ENST00000442009 SLCO1B1Q9Y6L6 691 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms