RNA–Protein interactions for RNA: ENST00000440289.6

PTPRJ-202, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 1 (best) BASIC

Gene PTPRJ, Length 3,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-202ENST00000440289 GLB1L3Q8NCI6 653 aaPredicted RBP17.69■□□□□ 0.42
PTPRJ-202ENST00000440289 TET1Q8NFU7 2136 aa17.69■□□□□ 0.42
PTPRJ-202ENST00000440289 DYNC2LI1Q8TCX1 351 aa17.69■□□□□ 0.42
PTPRJ-202ENST00000440289 P2RY13Q9BPV8 354 aa17.69■□□□□ 0.42
PTPRJ-202ENST00000440289 SUV39H1O43463 412 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 EBLN1P0CF75 366 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 CKMT1AP12532 417 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 PREPP48147 710 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 GPR17Q13304 367 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 SPATS1Q496A3 300 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 C17orf99Q6UX52 265 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 ZNF366Q8N895 744 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 SLC32A1Q9H598 525 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 ERVK-11Q9UQG0 969 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 PRUNE2Q8WUY3 3088 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 MGAT4DA6NG13 374 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 H3BM21 787 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 F11P03951 625 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 ACRV1P26436 265 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 HOXA9P31269 272 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 CTSKP43235 329 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 PRIM2P49643 509 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 RFX4Q33E94 735 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 UBE2UQ5VVX9 321 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 TCAIMQ8N3R3 496 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 SLC5A8Q8N695 610 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 ATL1Q8WXF7 558 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 CCDC115Q96NT0 180 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 SMAD5Q99717 465 aaKnown RBP17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 NUAK2Q9H093 628 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 IL1RAPQ9NPH3 570 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 C11orf16Q9NQ32 467 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 CTPS2Q9NRF8 586 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 LHX3Q9UBR4 397 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 GREB1Q4ZG55 1949 aa17.68■□□□□ 0.42
PTPRJ-202ENST00000440289 CTDSP2O14595 271 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 YY2O15391 372 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 RETP07949 1114 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 ETFAP13804 333 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 FPR1P21462 350 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 TGM1P22735 817 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 SLC19A1P41440 591 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 ARMCX4Q5H9R4 360 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 ATG9BQ674R7 924 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 ZNF605Q86T29 641 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 ZSWIM9Q86XI8 627 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 NAGSQ8N159 534 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 C1orf52Q8N6N3 182 aaKnown RBP17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 VANGL1Q8TAA9 524 aaPredicted RBP17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 SPATA17Q96L03 361 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 ZNF300Q96RE9 604 aaPredicted RBP17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 ACAT2Q9BWD1 397 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 ITPAQ9BY32 194 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 SLIRPQ9GZT3 109 aaKnown RBP17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 TMEM88BA6NKF7 163 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 FAM220BPB1ANY3 271 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 PCDH7O60245 1069 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 CLDN8P56748 225 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 CYP4F8P98187 520 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 UBE3AQ05086 875 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 RING1Q06587 406 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 DSC1Q08554 894 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 ZXDCQ2QGD7 858 aaPredicted RBP17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 ZNF852Q6ZMS4 543 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 TAGAPQ8N103 731 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 SCLYQ96I15 445 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 RDH12Q96NR8 316 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 CEP44Q9C0F1 390 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 RAB23Q9ULC3 237 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 CCNKO75909 580 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 PTHP01270 115 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 IGLV3-27P01718 113 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 FKBP1BP68106 108 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 CCSMST1Q4G0I0 132 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 INO80DQ53TQ3 878 aaPredicted RBP17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 FRG2Q64ET8 278 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 BCL7CQ8WUZ0 217 aaPredicted RBP17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 TMEM203Q969S6 136 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 FRG2BQ96QU4 278 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 NIPSNAP1Q9BPW8 284 aa17.67■□□□□ 0.42
PTPRJ-202ENST00000440289 GFRA2O00451 464 aa17.66■□□□□ 0.42
PTPRJ-202ENST00000440289 WBP4O75554 376 aaKnown RBP17.66■□□□□ 0.42
PTPRJ-202ENST00000440289 KCNK5O95279 499 aa17.66■□□□□ 0.42
PTPRJ-202ENST00000440289 SPAM1P38567 509 aa17.66■□□□□ 0.42
PTPRJ-202ENST00000440289 ST3GAL4Q11206 333 aa17.66■□□□□ 0.42
PTPRJ-202ENST00000440289 STARD3Q14849 445 aa17.66■□□□□ 0.42
PTPRJ-202ENST00000440289 CCBE1Q6UXH8 406 aaPredicted RBP17.66■□□□□ 0.42
PTPRJ-202ENST00000440289 CERS6Q6ZMG9 384 aa17.66■□□□□ 0.42
PTPRJ-202ENST00000440289 IFNL1Q8IU54 200 aa17.66■□□□□ 0.42
PTPRJ-202ENST00000440289 CNPPD1Q9BV87 410 aa17.66■□□□□ 0.42
PTPRJ-202ENST00000440289 TM9SF3Q9HD45 589 aa17.66■□□□□ 0.42
PTPRJ-202ENST00000440289 PRAMEF4O60810 478 aa17.66■□□□□ 0.42
PTPRJ-202ENST00000440289 KRT8P05787 483 aa17.66■□□□□ 0.42
PTPRJ-202ENST00000440289 ANXA4P09525 319 aaPredicted RBP17.66■□□□□ 0.42
PTPRJ-202ENST00000440289 RYKP34925 604 aa17.66■□□□□ 0.42
PTPRJ-202ENST00000440289 RPS26P62854 115 aaKnown RBP17.66■□□□□ 0.42
PTPRJ-202ENST00000440289 MC1RQ01726 317 aa17.66■□□□□ 0.42
PTPRJ-202ENST00000440289 PRAMEF9Q5VWM5 478 aa17.66■□□□□ 0.42
PTPRJ-202ENST00000440289 BCDIN3DQ7Z5W3 292 aaKnown RBP17.66■□□□□ 0.42
PTPRJ-202ENST00000440289 NXPE1Q8N323 547 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms