RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 A0A1W2PRB8 838 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 DUXAA6NLW8 204 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 SMIM1B2RUZ4 78 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 E9PI62 339 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 BLOC1S5-TXNDC5H3BN57 136 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 TRIM77I1YAP6 450 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 CIDEAO60543 219 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 BBOX1O75936 387 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 LINGO3P0C6S8 592 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 RNF224P0DH78 156 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 JAK1P23458 1154 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 EEF1DP29692 281 aaKnown RBP3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 PCGF2P35227 344 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 SLC9A3P48764 834 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 NR2C2P49116 596 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 MAPK12P53778 367 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 ERVK11-1P61568 191 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 GNB1P62873 340 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 MFAP5Q13361 173 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 PHLDA2Q53GA4 152 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 TECRLQ5HYJ1 363 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 ARHGAP11AQ6P4F7 1023 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 CEACAM20Q6UY09 585 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 FAM47EQ6ZV65 393 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 TMPRSS11BQ86T26 416 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 APLFQ8IW19 511 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 TTC30BQ8N4P2 665 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 CPSF7Q8N684 471 aaKnown RBP3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 PAPD5Q8NDF8 572 aaKnown RBP3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 OR2T12Q8NG77 320 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 MOSPD2Q8NHP6 518 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 RNF128Q8TEB7 428 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 FCAMRQ8WWV6 532 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 SYN2Q92777 582 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 SLAMF9Q96A28 289 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 ZNF653Q96CK0 615 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 MYADMQ96S97 322 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 PARK7Q99497 189 aaKnown RBP3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 SEPHS2Q99611 448 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 HNRNPABQ99729 332 aaKnown RBP3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 VN1R1Q9GZP7 353 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 ANKZF1Q9H8Y5 726 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 ZNF624Q9P2J8 865 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 ACAD8Q9UKU7 415 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 GRIP1Q9Y3R0 1128 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 ZSWIM8A7E2V4 1837 aa3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 ANKRD11Q6UB99 2663 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 DDX60LQ5H9U9 1706 aaKnown RBP3.02□□□□□ -1.93
HMGB3P12-201ENST00000438745 COL4A6Q14031 1691 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 SETXQ7Z333 2677 aaKnown RBP3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 FLT1P17948 1338 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 PTPRZ1P23471 2315 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 ZFHX2Q9C0A1 2572 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 A8MXE2 369 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 PDHXO00330 501 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 ZNF500O60304 480 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 OR10H2O60403 315 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 C22orf31O95567 290 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 ACSL3O95573 720 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 CAVIN2O95810 425 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 OR52Z1P0C646 297 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 IL9P15248 144 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 CYP11B2P19099 503 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 MPZP25189 248 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 HOXC8P31273 242 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 MTHFRP42898 656 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 RAB28P51157 221 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 CX3CL1P78423 397 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 PMP22Q01453 160 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 VWC2Q2TAL6 325 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 ZNF876PQ49A33 203 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 TCP11X2Q5H9J9 407 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 ARMC4Q5T2S8 1044 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 SFMBT2Q5VUG0 894 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 ARMC3Q5W041 872 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 CST9LP1Q5W188 147 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 SHQ1Q6PI26 577 aaKnown RBP3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 RBPMS2Q6ZRY4 209 aaKnown RBP3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 ARHGAP22Q7Z5H3 698 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 GPALPP1Q8IXQ4 340 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 CDK20Q8IZL9 346 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 ZNF843Q8N446 348 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 PI4KAP1Q8N8J0 262 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 XXYLT1Q8NBI6 393 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 OR13J1Q8NGT2 312 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 HDAC11Q96DB2 347 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 SIPA1Q96FS4 1042 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 THOC1Q96FV9 657 aaKnown RBP3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 RTP3Q9BQQ7 232 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 NAA11Q9BSU3 229 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 WNT5BQ9H1J7 359 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 ZBTB20Q9HC78 741 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 Q9N2K0 584 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 A4GALTQ9NPC4 353 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 MYNNQ9NPC7 610 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 C2orf42Q9NWW7 574 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 B3GAT1Q9P2W7 334 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 OSGIN1Q9UJX0 560 aa3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 CPSF3Q9UKF6 684 aaKnown RBP3.01□□□□□ -1.93
HMGB3P12-201ENST00000438745 SLC7A7Q9UM01 511 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms