RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 SLC39A3Q9BRY0 314 aa14.81□□□□□ -0.04
SGCE-205ENST00000437425 IMP3Q9NV31 184 aaKnown RBP14.81□□□□□ -0.04
SGCE-205ENST00000437425 FAM120CQ9NX05 1096 aaKnown RBP14.81□□□□□ -0.04
SGCE-205ENST00000437425 PACSIN3Q9UKS6 424 aa14.81□□□□□ -0.04
SGCE-205ENST00000437425 WDR37Q9Y2I8 494 aa14.81□□□□□ -0.04
SGCE-205ENST00000437425 PCDHB11Q9Y5F2 797 aa14.81□□□□□ -0.04
SGCE-205ENST00000437425 SNX13Q9Y5W8 968 aa14.81□□□□□ -0.04
SGCE-205ENST00000437425 TCRBV3S1A0A5B6 114 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 CASQ2O14958 399 aaPredicted RBP14.8□□□□□ -0.04
SGCE-205ENST00000437425 PEX1O43933 1283 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 GMNNO75496 209 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 UMPSP11172 480 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 CDH1P12830 882 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 HOXB6P17509 224 aaKnown RBP14.8□□□□□ -0.04
SGCE-205ENST00000437425 TIA1P31483 386 aaKnown RBP eCLIP14.8□□□□□ -0.04
SGCE-205ENST00000437425 SHMT2P34897 504 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 DGKQP52824 942 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 RPS13P62277 151 aaKnown RBP14.8□□□□□ -0.04
SGCE-205ENST00000437425 LIPEQ05469 1076 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 RPE65Q16518 533 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 MTX3Q5HYI7 312 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 LRIF1Q5T3J3 769 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 SWT1Q5T5J6 900 aaKnown RBP14.8□□□□□ -0.04
SGCE-205ENST00000437425 GPR153Q6NV75 609 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 GCNT7Q6ZNI0 430 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 R3HCC1LQ7Z5L2 792 aaKnown RBP14.8□□□□□ -0.04
SGCE-205ENST00000437425 CAMKMTQ7Z624 323 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 ABI3BPQ7Z7G0 1075 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 KIAA2013Q8IYS2 634 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 TMEM132CQ8N3T6 1108 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 DEFB123Q8N688 67 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 TMEM145Q8NBT3 493 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 TSTD1Q8NFU3 115 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 ZFPM2Q8WW38 1151 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 IL17FQ96PD4 163 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 TSSK3Q96PN8 268 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 CENPKQ9BS16 269 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 PCED1AQ9H1Q7 454 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 LMAN1LQ9HAT1 526 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 WNT16Q9UBV4 365 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 EBF1Q9UH73 591 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 TAC3Q9UHF0 121 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 MAGEL2Q9UJ55 1249 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 DGKBQ9Y6T7 804 aa14.8□□□□□ -0.04
SGCE-205ENST00000437425 ANKDD1BA6NHY2 528 aa14.79□□□□□ -0.04
SGCE-205ENST00000437425 H3BNX3 289 aa14.79□□□□□ -0.04
SGCE-205ENST00000437425 ANXA4P09525 319 aaPredicted RBP14.79□□□□□ -0.04
SGCE-205ENST00000437425 CD6P30203 668 aa14.79□□□□□ -0.04
SGCE-205ENST00000437425 SLC7A1P30825 629 aa14.79□□□□□ -0.04
SGCE-205ENST00000437425 GSK3BP49841 420 aa14.79□□□□□ -0.04
SGCE-205ENST00000437425 CLDN2P57739 230 aa14.79□□□□□ -0.04
SGCE-205ENST00000437425 MRPS22P82650 360 aaKnown RBP14.79□□□□□ -0.04
SGCE-205ENST00000437425 REEP5Q00765 189 aa14.79□□□□□ -0.04
SGCE-205ENST00000437425 PRDX1Q06830 199 aaKnown RBP14.79□□□□□ -0.04
SGCE-205ENST00000437425 CLCA4Q14CN2 919 aa14.79□□□□□ -0.04
SGCE-205ENST00000437425 C6orf10Q5SRN2 563 aa14.79□□□□□ -0.04
SGCE-205ENST00000437425 ANXA8L1Q5VT79 327 aa14.79□□□□□ -0.04
SGCE-205ENST00000437425 DCP2Q8IU60 420 aaKnown RBP14.79□□□□□ -0.04
SGCE-205ENST00000437425 GJD3Q8N144 294 aa14.79□□□□□ -0.04
SGCE-205ENST00000437425 ZNF687Q8N1G0 1237 aa14.79□□□□□ -0.04
SGCE-205ENST00000437425 KRTCAP2Q8N6L1 136 aa14.79□□□□□ -0.04
SGCE-205ENST00000437425 C1orf52Q8N6N3 182 aaKnown RBP14.79□□□□□ -0.04
SGCE-205ENST00000437425 DNAJC9Q8WXX5 260 aa14.79□□□□□ -0.04
SGCE-205ENST00000437425 OR1E3Q8WZA6 343 aa14.79□□□□□ -0.04
SGCE-205ENST00000437425 NELL1Q92832 810 aa14.79□□□□□ -0.04
SGCE-205ENST00000437425 MTERF3Q96E29 417 aa14.79□□□□□ -0.04
SGCE-205ENST00000437425 QRFPRQ96P65 431 aa14.79□□□□□ -0.04
SGCE-205ENST00000437425 MYOCQ99972 504 aa14.79□□□□□ -0.04
SGCE-205ENST00000437425 ECSITQ9BQ95 431 aa14.79□□□□□ -0.04
SGCE-205ENST00000437425 TACO1Q9BSH4 297 aaKnown RBP14.79□□□□□ -0.04
SGCE-205ENST00000437425 ATAD3AQ9NVI7 634 aa14.79□□□□□ -0.04
SGCE-205ENST00000437425 OR6C2Q9NZP2 312 aa14.79□□□□□ -0.04
SGCE-205ENST00000437425 PLAGL1Q9UM63 463 aa14.79□□□□□ -0.04
SGCE-205ENST00000437425 PCDHB3Q9Y5E6 796 aa14.79□□□□□ -0.04
SGCE-205ENST00000437425 CFAP20Q9Y6A4 193 aaKnown RBP14.79□□□□□ -0.04
SGCE-205ENST00000437425 TNFP01375 233 aa14.78□□□□□ -0.04
SGCE-205ENST00000437425 GPIP06744 558 aa14.78□□□□□ -0.04
SGCE-205ENST00000437425 ACADSP16219 412 aa14.78□□□□□ -0.04
SGCE-205ENST00000437425 CD72P21854 359 aa14.78□□□□□ -0.04
SGCE-205ENST00000437425 GRK3P35626 688 aa14.78□□□□□ -0.04
SGCE-205ENST00000437425 STARD6P59095 220 aa14.78□□□□□ -0.04
SGCE-205ENST00000437425 SRP54P61011 504 aaKnown RBP14.78□□□□□ -0.04
SGCE-205ENST00000437425 ZNF763Q0D2J5 394 aa14.78□□□□□ -0.04
SGCE-205ENST00000437425 ICE2Q659A1 982 aa14.78□□□□□ -0.04
SGCE-205ENST00000437425 IKBIPQ70UQ0 350 aa14.78□□□□□ -0.04
SGCE-205ENST00000437425 PAGE2Q7Z2X7 111 aa14.78□□□□□ -0.04
SGCE-205ENST00000437425 METTL4Q8N3J2 472 aa14.78□□□□□ -0.04
SGCE-205ENST00000437425 NATD1Q8N6N6 113 aa14.78□□□□□ -0.04
SGCE-205ENST00000437425 FAM156AQ8NDB6 213 aa14.78□□□□□ -0.04
SGCE-205ENST00000437425 SLC22A18Q96BI1 424 aa14.78□□□□□ -0.04
SGCE-205ENST00000437425 GBP5Q96PP8 586 aa14.78□□□□□ -0.04
SGCE-205ENST00000437425 PCDHAC1Q9H158 963 aa14.78□□□□□ -0.04
SGCE-205ENST00000437425 WSB2Q9NYS7 404 aaPredicted RBP14.78□□□□□ -0.04
SGCE-205ENST00000437425 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.78□□□□□ -0.04
SGCE-205ENST00000437425 MCM8Q9UJA3 840 aa14.78□□□□□ -0.04
SGCE-205ENST00000437425 AP4S1Q9Y587 144 aa14.78□□□□□ -0.04
SGCE-205ENST00000437425 ATG2BQ96BY7 2078 aa14.78□□□□□ -0.04
SGCE-205ENST00000437425 PRSS51A0A1B0GVH4 220 aa14.77□□□□□ -0.04
SGCE-205ENST00000437425 GNG14A0A1W2PPG7 69 aa14.77□□□□□ -0.04
SGCE-205ENST00000437425 A0A1W2PPV9 198 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms