RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 RASGRP1O95267 797 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 APBB3O95704 486 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 TGFB1P01137 390 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 PHC1P78364 1004 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 MRPS22P82650 360 aaKnown RBP20.32■□□□□ 0.84
PTPRF-207ENST00000436724 PRKCQQ04759 706 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 ACSM2AQ08AH3 577 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 PAGE2BQ5JRK9 111 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 C6orf10Q5SRN2 563 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 ACSM2BQ68CK6 577 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 C17orf64Q86WR6 236 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 SLC22A18ASQ8N1D0 253 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 DEFB123Q8N688 67 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 OR52E1Q8NGJ3 308 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 SMPDL3AQ92484 453 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 TMEM125Q96AQ2 219 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 C11orf24Q96F05 449 aaPredicted RBP20.32■□□□□ 0.84
PTPRF-207ENST00000436724 HAUS8Q9BT25 410 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 WSB2Q9NYS7 404 aaPredicted RBP20.32■□□□□ 0.84
PTPRF-207ENST00000436724 SPATA7Q9P0W8 599 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 FBXL21Q9UKT6 434 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 DYTNA2CJ06 578 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 ZCCHC18P0CG32 403 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 ALG11Q2TAA5 492 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 FOXB2Q5VYV0 432 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 KIAA0895LQ68EN5 471 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 NANOGP8Q6NSW7 305 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 FAM129CQ86XR2 697 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 HID1Q8IV36 788 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 FAM20CQ8IXL6 584 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 DPP10Q8N608 796 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 GLB1L3Q8NCI6 653 aaPredicted RBP20.32■□□□□ 0.84
PTPRF-207ENST00000436724 CDC26Q8NHZ8 85 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 FCRL1Q96LA6 429 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 NANOGQ9H9S0 305 aa20.32■□□□□ 0.84
PTPRF-207ENST00000436724 TRBV23OR9-2A0A075B6M9 112 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 AKAP10O43572 662 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 HSD3B1P14060 373 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 HSD3B2P26439 372 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 MAPK1P28482 360 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 HSD17B2P37059 387 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 ACTR1BP42025 376 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 AQP4P55087 323 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 SRP54P61011 504 aaKnown RBP20.31■□□□□ 0.84
PTPRF-207ENST00000436724 ACTR1AP61163 376 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 RAE1P78406 368 aaKnown RBP20.31■□□□□ 0.84
PTPRF-207ENST00000436724 HIST2H2ACQ16777 129 aaPredicted RBP20.31■□□□□ 0.84
PTPRF-207ENST00000436724 HIST2H2AA3Q6FI13 130 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 PRMT9Q6P2P2 845 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 SIX5Q8N196 739 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 GTF2H4Q92759 462 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 REPS1Q96D71 796 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 OR51B5Q9H339 312 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 DMRT3Q9NQL9 472 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 H7BY64 318 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 MTHFD1P11586 935 aaKnown RBP20.31■□□□□ 0.84
PTPRF-207ENST00000436724 CD6P30203 668 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 SOX11P35716 441 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 RAB28P51157 221 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 FOXM1Q08050 763 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 LRRC32Q14392 662 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 TRIP10Q15642 601 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 MAPKAPK3Q16644 382 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 TMIGD1Q6UXZ0 262 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 CYP2R1Q6VVX0 501 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 DNAJC14Q6Y2X3 702 aaPredicted RBP20.31■□□□□ 0.84
PTPRF-207ENST00000436724 IFNEQ86WN2 208 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 SYT12Q8IV01 421 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 SYNPOQ8N3V7 929 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 SNX19Q92543 992 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 PRAP1Q96NZ9 151 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 OR52E6Q96RD3 313 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 VCX3BQ9H321 246 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 SLC24A3Q9HC58 644 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 PDP2Q9P2J9 529 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 ICKQ9UPZ9 632 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 NEUROG3Q9Y4Z2 214 aa20.31■□□□□ 0.84
PTPRF-207ENST00000436724 LAMA1P25391 3075 aa20.3■□□□□ 0.84
PTPRF-207ENST00000436724 PRAMEF26H0Y7S4 382 aa20.3■□□□□ 0.84
PTPRF-207ENST00000436724 GBAP04062 536 aa20.3■□□□□ 0.84
PTPRF-207ENST00000436724 IL6P05231 212 aa20.3■□□□□ 0.84
PTPRF-207ENST00000436724 UQCRBP14927 111 aa20.3■□□□□ 0.84
PTPRF-207ENST00000436724 YPEL5P62699 121 aa20.3■□□□□ 0.84
PTPRF-207ENST00000436724 RBBP5Q15291 538 aaKnown RBP20.3■□□□□ 0.84
PTPRF-207ENST00000436724 ZNF542PQ5EBM4 170 aa20.3■□□□□ 0.84
PTPRF-207ENST00000436724 VN1R5Q7Z5H4 357 aa20.3■□□□□ 0.84
PTPRF-207ENST00000436724 ABI3BPQ7Z7G0 1075 aa20.3■□□□□ 0.84
PTPRF-207ENST00000436724 RIMKLAQ8IXN7 391 aa20.3■□□□□ 0.84
PTPRF-207ENST00000436724 DEFB119Q8N690 84 aa20.3■□□□□ 0.84
PTPRF-207ENST00000436724 PIF1Q9H611 641 aa20.3■□□□□ 0.84
PTPRF-207ENST00000436724 VAPAQ9P0L0 249 aa20.3■□□□□ 0.84
PTPRF-207ENST00000436724 EGFL7Q9UHF1 273 aa20.3■□□□□ 0.84
PTPRF-207ENST00000436724 RUVBL1Q9Y265 456 aaKnown RBP20.3■□□□□ 0.84
PTPRF-207ENST00000436724 HS3ST3A1Q9Y663 406 aa20.3■□□□□ 0.84
PTPRF-207ENST00000436724 MUC3AQ02505 3323 aa20.3■□□□□ 0.84
PTPRF-207ENST00000436724 GOLGA4Q13439 2230 aaKnown RBP20.3■□□□□ 0.84
PTPRF-207ENST00000436724 FEZF1A0PJY2 475 aa20.29■□□□□ 0.84
PTPRF-207ENST00000436724 PEX1O43933 1283 aa20.29■□□□□ 0.84
PTPRF-207ENST00000436724 SELPLGQ14242 412 aa20.29■□□□□ 0.84
PTPRF-207ENST00000436724 PGS1Q32NB8 556 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms