RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 GPLD1P80108 840 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 SF3A2Q15428 464 aaKnown RBP22.09■■□□□ 1.13
CPSF4-204ENST00000436336 INAVAQ3KP66 663 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 Q6ZSR9 355 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 TRIM73Q86UV7 250 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 ZUFSPQ96AP4 578 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 TUBGCP3Q96CW5 907 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 AHCYL2Q96HN2 611 aaKnown RBP22.09■■□□□ 1.13
CPSF4-204ENST00000436336 ABCG4Q9H172 646 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 TRBC2A0A5B9 178 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 EME2A4GXA9 379 aaPredicted RBP22.09■■□□□ 1.13
CPSF4-204ENST00000436336 HSD3B1P14060 373 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 HSD3B2P26439 372 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 OR1D5P58170 312 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 CSTF3Q12996 717 aaKnown RBP22.09■■□□□ 1.13
CPSF4-204ENST00000436336 RBBP5Q15291 538 aaKnown RBP22.09■■□□□ 1.13
CPSF4-204ENST00000436336 IMPG1Q17R60 797 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 METTL21CQ5VZV1 264 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 NXNQ6DKJ4 435 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 PAQR7Q86WK9 346 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 TBC1D19Q8N5T2 526 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 GBP7Q8N8V2 638 aaPredicted RBP22.09■■□□□ 1.13
CPSF4-204ENST00000436336 OR2T11Q8NH01 316 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 HUS1BQ8NHY5 278 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 CCDC74AQ96AQ1 378 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 SARGQ9BW04 601 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 RHBGQ9H310 441 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 AKTIPQ9H8T0 292 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 BRF2Q9HAW0 419 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 EPHA6Q9UF33 1036 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 ADGRE2Q9UHX3 823 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 CCL27Q9Y4X3 112 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 RP1P56715 2156 aa22.08■■□□□ 1.13
CPSF4-204ENST00000436336 DUX1O43812 170 aa22.08■■□□□ 1.12
CPSF4-204ENST00000436336 LRP3O75074 770 aa22.08■■□□□ 1.12
CPSF4-204ENST00000436336 DCTN3O75935 186 aa22.08■■□□□ 1.12
CPSF4-204ENST00000436336 MAGP20916 626 aa22.08■■□□□ 1.12
CPSF4-204ENST00000436336 GRK6P43250 576 aa22.08■■□□□ 1.12
CPSF4-204ENST00000436336 PPM1FP49593 454 aaPredicted RBP22.08■■□□□ 1.12
CPSF4-204ENST00000436336 PPP1CAP62136 330 aa22.08■■□□□ 1.12
CPSF4-204ENST00000436336 PHEXP78562 749 aa22.08■■□□□ 1.12
CPSF4-204ENST00000436336 SPEM2Q0P670 501 aa22.08■■□□□ 1.12
CPSF4-204ENST00000436336 PROX2Q3B8N5 592 aa22.08■■□□□ 1.12
CPSF4-204ENST00000436336 ALYREFQ86V81 257 aaKnown RBP22.08■■□□□ 1.12
CPSF4-204ENST00000436336 NAT6Q93015 286 aa22.08■■□□□ 1.12
CPSF4-204ENST00000436336 MTERF1Q99551 399 aaKnown RBP22.08■■□□□ 1.12
CPSF4-204ENST00000436336 EVA1BQ9NVM1 165 aa22.08■■□□□ 1.12
CPSF4-204ENST00000436336 TRIM33Q9UPN9 1127 aa22.08■■□□□ 1.12
CPSF4-204ENST00000436336 KLHL20Q9Y2M5 609 aa22.08■■□□□ 1.12
CPSF4-204ENST00000436336 FEZF1A0PJY2 475 aa22.07■■□□□ 1.12
CPSF4-204ENST00000436336 OR2A25A4D2G3 310 aa22.07■■□□□ 1.12
CPSF4-204ENST00000436336 FOXE1O00358 373 aaPredicted RBP22.07■■□□□ 1.12
CPSF4-204ENST00000436336 FLRT2O43155 660 aa22.07■■□□□ 1.12
CPSF4-204ENST00000436336 B4GAT1O43505 415 aa22.07■■□□□ 1.12
CPSF4-204ENST00000436336 LMNAP02545 664 aaKnown RBP22.07■■□□□ 1.12
CPSF4-204ENST00000436336 PRR35P0CG20 571 aa22.07■■□□□ 1.12
CPSF4-204ENST00000436336 CKMT1AP12532 417 aa22.07■■□□□ 1.12
CPSF4-204ENST00000436336 SERPINB1P30740 379 aa22.07■■□□□ 1.12
CPSF4-204ENST00000436336 PIK3CBP42338 1070 aa22.07■■□□□ 1.12
CPSF4-204ENST00000436336 DDX39BQ13838 428 aaKnown RBP22.07■■□□□ 1.12
CPSF4-204ENST00000436336 ADNP2Q6IQ32 1131 aa22.07■■□□□ 1.12
CPSF4-204ENST00000436336 IRGCQ6NXR0 463 aa22.07■■□□□ 1.12
CPSF4-204ENST00000436336 GUSBP11Q6P575 273 aa22.07■■□□□ 1.12
CPSF4-204ENST00000436336 FIGLAQ6QHK4 219 aa22.07■■□□□ 1.12
CPSF4-204ENST00000436336 ACPTQ9BZG2 426 aa22.07■■□□□ 1.12
CPSF4-204ENST00000436336 SEMA4GQ9NTN9 838 aa22.07■■□□□ 1.12
CPSF4-204ENST00000436336 NCDNQ9UBB6 729 aa22.07■■□□□ 1.12
CPSF4-204ENST00000436336 CPED1A4D0V7 1026 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 ANKDD1BA6NHY2 528 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 E9PBE3 544 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 CDX4O14627 284 aaPredicted RBP22.06■■□□□ 1.12
CPSF4-204ENST00000436336 HAT1O14929 419 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 OR1F1O43749 312 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 KLHL41O60662 606 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 LBPP18428 481 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 GSTM2P28161 218 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 SCTRP47872 440 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 LSSP48449 732 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 DUSP3P51452 185 aaPredicted RBP22.06■■□□□ 1.12
CPSF4-204ENST00000436336 SLC14A1Q13336 389 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 NR6A1Q15406 480 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 CSRP2Q16527 193 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 ATP6AP1LQ52LC2 224 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 SPRED1Q7Z699 444 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP22.06■■□□□ 1.12
CPSF4-204ENST00000436336 ANKRD53Q8N9V6 530 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 TTLQ8NG68 377 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 NCSTNQ92542 709 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 PPP3R2Q96LZ3 170 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 SEMA6CQ9H3T2 930 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 C1GALT1Q9NS00 363 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 FAM86C1Q9NVL1 165 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 PPT2Q9UMR5 302 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 BTBD3Q9Y2F9 522 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 MAGEB17A8MXT2 336 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 NPIPB8E9PQR5 432 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 LSM1O15116 133 aaKnown RBP22.06■■□□□ 1.12
CPSF4-204ENST00000436336 CAPN5O15484 640 aaPredicted RBP22.06■■□□□ 1.12
CPSF4-204ENST00000436336 CCDC22O60826 627 aa22.06■■□□□ 1.12
CPSF4-204ENST00000436336 RSL1D1O76021 490 aaKnown RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms