RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 NUDT8Q8WV74 236 aa11.53□□□□□ -0.56
CTCFL-209ENST00000433949 C11orf24Q96F05 449 aaPredicted RBP11.53□□□□□ -0.56
CTCFL-209ENST00000433949 RMND5BQ96G75 393 aaPredicted RBP11.53□□□□□ -0.56
CTCFL-209ENST00000433949 REXO5Q96IC2 774 aaKnown RBP11.53□□□□□ -0.56
CTCFL-209ENST00000433949 OR4K3Q96R72 315 aa11.53□□□□□ -0.56
CTCFL-209ENST00000433949 CPPED1Q9BRF8 314 aaPredicted RBP11.53□□□□□ -0.56
CTCFL-209ENST00000433949 EFCAB11Q9BUY7 163 aa11.53□□□□□ -0.56
CTCFL-209ENST00000433949 MKRN2Q9H000 416 aaKnown RBP11.53□□□□□ -0.56
CTCFL-209ENST00000433949 OR2AG1Q9H205 316 aa11.53□□□□□ -0.56
CTCFL-209ENST00000433949 EHD1Q9H4M9 534 aa11.53□□□□□ -0.56
CTCFL-209ENST00000433949 SGK2Q9HBY8 427 aa11.53□□□□□ -0.56
CTCFL-209ENST00000433949 GULP1Q9UBP9 304 aa11.53□□□□□ -0.56
CTCFL-209ENST00000433949 COQ6Q9Y2Z9 468 aa11.53□□□□□ -0.56
CTCFL-209ENST00000433949 CKAP5Q14008 2032 aa11.53□□□□□ -0.56
CTCFL-209ENST00000433949 PDLIM1O00151 329 aa11.52□□□□□ -0.56
CTCFL-209ENST00000433949 AHCYL1O43865 530 aa11.52□□□□□ -0.56
CTCFL-209ENST00000433949 PGM3O95394 542 aa11.52□□□□□ -0.56
CTCFL-209ENST00000433949 TFAP2AP05549 437 aa11.52□□□□□ -0.56
CTCFL-209ENST00000433949 HOXB9P17482 250 aaPredicted RBP11.52□□□□□ -0.56
CTCFL-209ENST00000433949 PBLDP30039 288 aaPredicted RBP11.52□□□□□ -0.56
CTCFL-209ENST00000433949 SOX11P35716 441 aa11.52□□□□□ -0.56
CTCFL-209ENST00000433949 RPS9P46781 194 aaKnown RBP11.52□□□□□ -0.56
CTCFL-209ENST00000433949 TUBA4AP68366 448 aa11.52□□□□□ -0.56
CTCFL-209ENST00000433949 RPA4Q13156 261 aa11.52□□□□□ -0.56
CTCFL-209ENST00000433949 GK3PQ14409 553 aa11.52□□□□□ -0.56
CTCFL-209ENST00000433949 PAGE2BQ5JRK9 111 aa11.52□□□□□ -0.56
CTCFL-209ENST00000433949 MED27Q6P2C8 311 aa11.52□□□□□ -0.56
CTCFL-209ENST00000433949 UNC5DQ6UXZ4 953 aa11.52□□□□□ -0.56
CTCFL-209ENST00000433949 GCNT7Q6ZNI0 430 aa11.52□□□□□ -0.56
CTCFL-209ENST00000433949 SERPINA11Q86U17 422 aa11.52□□□□□ -0.56
CTCFL-209ENST00000433949 SYTL1Q8IYJ3 562 aa11.52□□□□□ -0.56
CTCFL-209ENST00000433949 GJD3Q8N144 294 aa11.52□□□□□ -0.56
CTCFL-209ENST00000433949 LILRA3Q8N6C8 439 aaPredicted RBP11.52□□□□□ -0.56
CTCFL-209ENST00000433949 VPS37AQ8NEZ2 397 aa11.52□□□□□ -0.56
CTCFL-209ENST00000433949 OR2L2Q8NH16 312 aa11.52□□□□□ -0.56
CTCFL-209ENST00000433949 GANCQ8TET4 914 aa11.52□□□□□ -0.56
CTCFL-209ENST00000433949 FAM162AQ96A26 154 aa11.52□□□□□ -0.56
CTCFL-209ENST00000433949 WDR34Q96EX3 536 aa11.52□□□□□ -0.56
CTCFL-209ENST00000433949 VPS50Q96JG6 964 aa11.52□□□□□ -0.56
CTCFL-209ENST00000433949 MTERF1Q99551 399 aaKnown RBP11.52□□□□□ -0.56
CTCFL-209ENST00000433949 IKZF5Q9H5V7 419 aa11.52□□□□□ -0.56
CTCFL-209ENST00000433949 LMAN1LQ9HAT1 526 aa11.52□□□□□ -0.56
CTCFL-209ENST00000433949 OLAHQ9NV23 265 aa11.52□□□□□ -0.56
CTCFL-209ENST00000433949 C2orf42Q9NWW7 574 aa11.52□□□□□ -0.56
CTCFL-209ENST00000433949 PPT2Q9UMR5 302 aa11.52□□□□□ -0.56
CTCFL-209ENST00000433949 A0A1W2PQF6 199 aa11.52□□□□□ -0.57
CTCFL-209ENST00000433949 KRT87PA6NCN2 255 aa11.52□□□□□ -0.57
CTCFL-209ENST00000433949 FAM170BA6NMN3 283 aa11.52□□□□□ -0.57
CTCFL-209ENST00000433949 H3BNH8 94 aa11.52□□□□□ -0.57
CTCFL-209ENST00000433949 DLGAP1O14490 977 aa11.52□□□□□ -0.57
CTCFL-209ENST00000433949 EI24O14681 340 aa11.52□□□□□ -0.57
CTCFL-209ENST00000433949 MID1O15344 667 aa11.52□□□□□ -0.57
CTCFL-209ENST00000433949 MMP20O60882 483 aa11.52□□□□□ -0.57
CTCFL-209ENST00000433949 GLULP15104 373 aa11.52□□□□□ -0.57
CTCFL-209ENST00000433949 PTPN6P29350 595 aa11.52□□□□□ -0.57
CTCFL-209ENST00000433949 STARD3Q14849 445 aa11.52□□□□□ -0.57
CTCFL-209ENST00000433949 DUOXA1Q1HG43 343 aa11.52□□□□□ -0.57
CTCFL-209ENST00000433949 DHRSXQ8N5I4 330 aa11.52□□□□□ -0.57
CTCFL-209ENST00000433949 TSPAN14Q8NG11 270 aa11.52□□□□□ -0.57
CTCFL-209ENST00000433949 OR7G3Q8NG95 312 aa11.52□□□□□ -0.57
CTCFL-209ENST00000433949 OR9A1PQ8NGU1 263 aa11.52□□□□□ -0.57
CTCFL-209ENST00000433949 ZNF480Q8WV37 535 aa11.52□□□□□ -0.57
CTCFL-209ENST00000433949 SDCCAG3Q96C92 435 aa11.52□□□□□ -0.57
CTCFL-209ENST00000433949 DGCR14Q96DF8 476 aaKnown RBP11.52□□□□□ -0.57
CTCFL-209ENST00000433949 HIC2Q96JB3 615 aa11.52□□□□□ -0.57
CTCFL-209ENST00000433949 RDH12Q96NR8 316 aa11.52□□□□□ -0.57
CTCFL-209ENST00000433949 CLK4Q9HAZ1 481 aaKnown RBP11.52□□□□□ -0.57
CTCFL-209ENST00000433949 DCAF13Q9NV06 445 aaKnown RBP11.52□□□□□ -0.57
CTCFL-209ENST00000433949 ATXN10Q9UBB4 475 aa11.52□□□□□ -0.57
CTCFL-209ENST00000433949 DNAJB9Q9UBS3 223 aa11.52□□□□□ -0.57
CTCFL-209ENST00000433949 PCDHGB4Q9UN71 923 aa11.52□□□□□ -0.57
CTCFL-209ENST00000433949 DYRK1BQ9Y463 629 aa11.52□□□□□ -0.57
CTCFL-209ENST00000433949 PCDHGB5Q9Y5G0 923 aa11.52□□□□□ -0.57
CTCFL-209ENST00000433949 BDP1A6H8Y1 2624 aa11.51□□□□□ -0.57
CTCFL-209ENST00000433949 KLHL33A6NCF5 533 aa11.51□□□□□ -0.57
CTCFL-209ENST00000433949 PRR23AA6NEV1 266 aa11.51□□□□□ -0.57
CTCFL-209ENST00000433949 MGAT4DA6NG13 374 aa11.51□□□□□ -0.57
CTCFL-209ENST00000433949 C19orf67A6NJJ6 358 aa11.51□□□□□ -0.57
CTCFL-209ENST00000433949 H0YAE9 185 aa11.51□□□□□ -0.57
CTCFL-209ENST00000433949 FOXE1O00358 373 aaPredicted RBP11.51□□□□□ -0.57
CTCFL-209ENST00000433949 MAN2B1O00754 1011 aa11.51□□□□□ -0.57
CTCFL-209ENST00000433949 CREG1O75629 220 aa11.51□□□□□ -0.57
CTCFL-209ENST00000433949 HPRP00739 348 aa11.51□□□□□ -0.57
CTCFL-209ENST00000433949 TBPL1P62380 186 aa11.51□□□□□ -0.57
CTCFL-209ENST00000433949 EPS8Q12929 822 aa11.51□□□□□ -0.57
CTCFL-209ENST00000433949 LAPTM5Q13571 262 aa11.51□□□□□ -0.57
CTCFL-209ENST00000433949 HIST2H2ACQ16777 129 aaPredicted RBP11.51□□□□□ -0.57
CTCFL-209ENST00000433949 CCSMST1Q4G0I0 132 aa11.51□□□□□ -0.57
CTCFL-209ENST00000433949 KCTD21Q4G0X4 260 aa11.51□□□□□ -0.57
CTCFL-209ENST00000433949 HIST2H2AA3Q6FI13 130 aa11.51□□□□□ -0.57
CTCFL-209ENST00000433949 ERICH5Q6P6B1 374 aa11.51□□□□□ -0.57
CTCFL-209ENST00000433949 TMEM92Q6UXU6 159 aa11.51□□□□□ -0.57
CTCFL-209ENST00000433949 ADAMTSL4Q6UY14 1074 aa11.51□□□□□ -0.57
CTCFL-209ENST00000433949 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.51□□□□□ -0.57
CTCFL-209ENST00000433949 SLCO4C1Q6ZQN7 724 aa11.51□□□□□ -0.57
CTCFL-209ENST00000433949 TRMT11Q7Z4G4 463 aaKnown RBP11.51□□□□□ -0.57
CTCFL-209ENST00000433949 CAMKMTQ7Z624 323 aa11.51□□□□□ -0.57
CTCFL-209ENST00000433949 EID3Q8N140 333 aa11.51□□□□□ -0.57
CTCFL-209ENST00000433949 SVOPLQ8N434 492 aa11.51□□□□□ -0.57
CTCFL-209ENST00000433949 FAM47BQ8NA70 645 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms