RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 TRMT61BQ9BVS5 477 aaKnown RBP2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 CDK19Q9BWU1 502 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 PRRG4Q9BZD6 226 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 MTMR12Q9C0I1 747 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 SDCBP2Q9H190 292 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 SNX25Q9H3E2 840 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 RAVER2Q9HCJ3 691 aaKnown RBP2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 PTTG2Q9NZH5 202 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 FLRT3Q9NZU0 649 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 KCNG2Q9UJ96 466 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 NOCTQ9UK39 431 aaKnown RBP2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 FBXL5Q9UKA1 691 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 PCDHGB1Q9Y5G3 927 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 PFASO15067 1338 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 AKNAQ7Z591 1439 aa2.85□□□□□ -1.95
HMGB1P27-201ENST00000431429 FANCAO15360 1455 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 BICDL2A1A5D9 508 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 MTMR11A4FU01 709 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 ANKRD61A6NGH8 418 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 NPIPA3F8WFD2 350 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 DDHD2O94830 711 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 GPIP06744 558 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 F7P08709 466 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 T-ENOLP0DO92 83 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 SNHG28P0DPA3 235 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 F3P13726 295 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 CDH3P22223 829 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 ELAVL4P26378 380 aaKnown RBP2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 TIMP3P35625 211 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 CDKN1AP38936 164 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 CDH11P55287 796 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 DLX5P56178 289 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 ERVFC1-1P60608 527 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 GCNT1Q02742 428 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 IL10RBQ08334 325 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 AP1B1Q10567 949 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 TRAP1Q12931 704 aaKnown RBP2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 SRSF9Q13242 221 aaKnown RBP eCLIP2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 GPR17Q13304 367 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 NONOQ15233 471 aaKnown RBP eCLIP2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 CCDC6Q16204 474 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 RBBP7Q16576 425 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 ACCSLQ4AC99 568 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 SLC25A53Q5H9E4 307 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 LCE1AQ5T7P2 110 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 FAM46CQ5VWP2 391 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 PIGZQ86VD9 579 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 ANKRD46Q86W74 232 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 CCDC60Q8IWA6 550 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 AQP12AQ8IXF9 295 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 EID3Q8N140 333 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 NOA1Q8NC60 698 aaKnown RBP2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 RNASE8Q8TDE3 154 aaKnown RBP2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 PIK3R3Q92569 461 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 WBP2Q969T9 261 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 THOC3Q96J01 351 aaKnown RBP2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 C4orf45Q96LM5 186 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 CCDC43Q96MW1 224 aaKnown RBP2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 PIGQQ9BRB3 760 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 TRIM7Q9C029 511 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 SLC5A7Q9GZV3 580 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 THAP2Q9H0W7 228 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 RNPEPL1Q9HAU8 725 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 PRMT8Q9NR22 394 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 GPR173Q9NS66 373 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 FAM207AQ9NSI2 230 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 DNAJC11Q9NVH1 559 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 SPG21Q9NZD8 308 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 PKD2L2Q9NZM6 624 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 RIPK3Q9Y572 518 aa2.84□□□□□ -1.95
HMGB1P27-201ENST00000431429 PTPRKQ15262 1439 aa2.84□□□□□ -1.96
HMGB1P27-201ENST00000431429 ADAMTS12P58397 1594 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 ABCA5Q8WWZ7 1642 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 MAP3K4Q9Y6R4 1608 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 ADAMTSL3P82987 1691 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 PBRM1Q86U86 1689 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 C13orf42A0A1B0GVH6 325 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 SMIM30A4D0T7 59 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 C5orf51A6NDU8 294 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 BMPR1BO00238 502 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 VEGFDO43915 354 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 KERAO60938 352 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 GLRA3O75311 464 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 NR3C1P04150 777 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 ERVK-10P10266 1014 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 DLATP10515 647 aaKnown RBP2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 CETPP11597 493 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 AMD1P17707 334 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 HLA-DPA1P20036 260 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 PIK3R1P27986 724 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 CCKARP32238 428 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 CSTF2P33240 577 aaKnown RBP eCLIP2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 MAGEB1P43366 347 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 NPBWR1P48145 328 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 OR1D5P58170 312 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 KRTAP10-11P60412 298 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 NPRL3Q12980 569 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 EXT1Q16394 746 aa2.83□□□□□ -1.96
HMGB1P27-201ENST00000431429 IZUMO4Q1ZYL8 232 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms