RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 BTNL2Q9UIR0 455 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 TSC22D4Q9Y3Q8 395 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 KCNE2Q9Y6J6 123 aa13.47□□□□□ -0.25
HOXC4-202ENST00000430889 C1orf226A1L170 272 aa13.46□□□□□ -0.26
HOXC4-202ENST00000430889 MGAT4DA6NG13 374 aa13.46□□□□□ -0.26
HOXC4-202ENST00000430889 FPGTO14772 594 aa13.46□□□□□ -0.26
HOXC4-202ENST00000430889 POP7O75817 140 aaKnown RBP13.46□□□□□ -0.26
HOXC4-202ENST00000430889 KLHL18O94889 574 aa13.46□□□□□ -0.26
HOXC4-202ENST00000430889 KCNK5O95279 499 aa13.46□□□□□ -0.26
HOXC4-202ENST00000430889 SERPINA1P01009 418 aa13.46□□□□□ -0.26
HOXC4-202ENST00000430889 THRBP10828 461 aa13.46□□□□□ -0.26
HOXC4-202ENST00000430889 CDH2P19022 906 aaPredicted RBP13.46□□□□□ -0.26
HOXC4-202ENST00000430889 TIA1P31483 386 aaKnown RBP eCLIP13.46□□□□□ -0.26
HOXC4-202ENST00000430889 ASMTP46597 345 aa13.46□□□□□ -0.26
HOXC4-202ENST00000430889 CDH15P55291 814 aa13.46□□□□□ -0.26
HOXC4-202ENST00000430889 TAP2Q03519 686 aa13.46□□□□□ -0.26
HOXC4-202ENST00000430889 FCHO2Q0JRZ9 810 aa13.46□□□□□ -0.26
HOXC4-202ENST00000430889 MYBPC3Q14896 1274 aa13.46□□□□□ -0.26
HOXC4-202ENST00000430889 SF1Q15637 639 aaKnown RBP13.46□□□□□ -0.26
HOXC4-202ENST00000430889 SPIN4Q56A73 249 aa13.46□□□□□ -0.26
HOXC4-202ENST00000430889 PIP5KL1Q5T9C9 394 aa13.46□□□□□ -0.26
HOXC4-202ENST00000430889 MED27Q6P2C8 311 aa13.46□□□□□ -0.26
HOXC4-202ENST00000430889 TTC33Q6PID6 262 aaPredicted RBP13.46□□□□□ -0.26
HOXC4-202ENST00000430889 ABRAXAS1Q6UWZ7 409 aa13.46□□□□□ -0.26
HOXC4-202ENST00000430889 VITQ6UXI7 678 aa13.46□□□□□ -0.26
HOXC4-202ENST00000430889 TRAPPC5Q8IUR0 188 aa13.46□□□□□ -0.26
HOXC4-202ENST00000430889 EID3Q8N140 333 aa13.46□□□□□ -0.26
HOXC4-202ENST00000430889 ZCCHC7Q8N3Z6 543 aaKnown RBP13.46□□□□□ -0.26
HOXC4-202ENST00000430889 RAB7BQ96AH8 199 aa13.46□□□□□ -0.26
HOXC4-202ENST00000430889 OSBPL10Q9BXB5 764 aa13.46□□□□□ -0.26
HOXC4-202ENST00000430889 ITM2CQ9NQX7 267 aa13.46□□□□□ -0.26
HOXC4-202ENST00000430889 MAPRE3Q9UPY8 281 aa13.46□□□□□ -0.26
HOXC4-202ENST00000430889 LAMA3Q16787 3333 aa13.46□□□□□ -0.26
HOXC4-202ENST00000430889 A0A087WXM4 84 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 GABRR3A8MPY1 467 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 CLIC1O00299 241 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 LZTS3O60299 673 aaPredicted RBP13.45□□□□□ -0.26
HOXC4-202ENST00000430889 CCNDBP1O95273 360 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 CST1P01037 141 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 C1GALT1C1LP0DN25 315 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 ERGP11308 486 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 COX7A2P14406 83 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 ENGP17813 658 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 IDSP22304 550 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 IST1P53990 364 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 RPS13P62277 151 aaKnown RBP13.45□□□□□ -0.26
HOXC4-202ENST00000430889 ENPP2Q13822 863 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 DDX39BQ13838 428 aaKnown RBP13.45□□□□□ -0.26
HOXC4-202ENST00000430889 NFE2L1Q14494 772 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 CATSPEREQ5SY80 951 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 OTUD3Q5T2D3 398 aaPredicted RBP13.45□□□□□ -0.26
HOXC4-202ENST00000430889 TANGO2Q6ICL3 276 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 CES5AQ6NT32 575 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 UNC5DQ6UXZ4 953 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 TMEM179BQ7Z7N9 219 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 TMPRSS11BQ86T26 416 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 MMAAQ8IVH4 418 aaKnown RBP13.45□□□□□ -0.26
HOXC4-202ENST00000430889 OFCC1Q8IZS5 231 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 CLECL1Q8IZS7 167 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 ZNF786Q8N393 782 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 PLA2G15Q8NCC3 412 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 TMIGD2Q96BF3 282 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 PYURFQ96I23 114 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 MBOAT4Q96T53 435 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 EFCAB11Q9BUY7 163 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 DUSP26Q9BV47 211 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 TRIM4Q9C037 500 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 DMRT3Q9NQL9 472 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 ATP6V1HQ9UI12 483 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 TRPM6Q9BX84 2022 aa13.45□□□□□ -0.26
HOXC4-202ENST00000430889 C1QTNF3-AMACRE9PGA6 284 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 MYO1DO94832 1006 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 ABCB1P08183 1280 aaPredicted RBP13.44□□□□□ -0.26
HOXC4-202ENST00000430889 SHMT2P34897 504 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 DRD3P35462 400 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 DCTP40126 519 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 LBX1P52954 281 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 CNTN1Q12860 1018 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 LAPTM5Q13571 262 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 GTF2H3Q13889 308 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 SLBPQ14493 270 aaKnown RBP eCLIP13.44□□□□□ -0.26
HOXC4-202ENST00000430889 VMACQ2NL98 169 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 ERICH5Q6P6B1 374 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 ARMCX6Q7L4S7 300 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 STK32CQ86UX6 486 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 ZDHHC13Q8IUH4 622 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 SYNPOQ8N3V7 929 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 OXR1Q8N573 874 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 OR5K1Q8NHB7 308 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 REPS1Q96D71 796 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 CXorf40BQ96DE9 158 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 HIC2Q96JB3 615 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 PANX1Q96RD7 426 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 SPNS1Q9H2V7 528 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 AASDHPPTQ9NRN7 309 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 YBX2Q9Y2T7 364 aaKnown RBP13.44□□□□□ -0.26
HOXC4-202ENST00000430889 PCDHB11Q9Y5F2 797 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 DOCK9Q9BZ29 2069 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 PIPSLA2A3N6 862 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 EVPLLA8MZ36 301 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms