RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 AGAP11Q8TF27 550 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 RERGQ96A58 199 aaPredicted RBP10.56□□□□□ -0.72
CHD4-202ENST00000430771 THAP11Q96EK4 314 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 SEC16BQ96JE7 1060 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 PRAP1Q96NZ9 151 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 SARGQ9BW04 601 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 ZBTB26Q9HCK0 441 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 PRM3Q9NNZ6 103 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 MID1IP1Q9NPA3 183 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 KLHL20Q9Y2M5 609 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 LOXL2Q9Y4K0 774 aa10.56□□□□□ -0.72
CHD4-202ENST00000430771 A0A0J9YVX5 310 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 OR7A17O14581 309 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 ESRRBO95718 433 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 HSPA4LO95757 839 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 JUPP14923 745 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 HMOX2P30519 316 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 CASP2P42575 452 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 RAB15P59190 212 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 YBX1P67809 324 aaKnown RBP10.55□□□□□ -0.72
CHD4-202ENST00000430771 CYP4F3Q08477 520 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 STX3Q13277 289 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 TUBB3Q13509 450 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 DOC2AQ14183 400 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 C16orf72Q14CZ0 275 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 ZIC1Q15915 447 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 DEFB110Q30KQ9 67 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 MED27Q6P2C8 311 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 TMIGD1Q6UXZ0 262 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 RPS27LQ71UM5 84 aaKnown RBP10.55□□□□□ -0.72
CHD4-202ENST00000430771 MILR1Q7Z6M3 343 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 CUZD1Q86UP6 607 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 FAM129CQ86XR2 697 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 CHCHD4Q8N4Q1 142 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 L3MBTL4Q8NA19 623 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 OR4F6Q8NGB9 312 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 OR4K1Q8NGD4 311 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 LRRC8CQ8TDW0 803 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 NLNQ9BYT8 704 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 SLC29A3Q9BZD2 475 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 NT5DC2Q9H857 520 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 IRAK4Q9NWZ3 460 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 GEMIN8Q9NWZ8 242 aaKnown RBP10.55□□□□□ -0.72
CHD4-202ENST00000430771 SIDT1Q9NXL6 827 aaKnown RBP10.55□□□□□ -0.72
CHD4-202ENST00000430771 PLCL2Q9UPR0 1127 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 PCDHGA4Q9Y5G9 962 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 PCDHGA11Q9Y5H2 935 aa10.55□□□□□ -0.72
CHD4-202ENST00000430771 PTPRBP23467 1997 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 EFCAB7A8K855 629 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 B4E171 279 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 TMEM150CB9EJG8 249 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 TXNDC9O14530 226 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 KLF11O14901 512 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 OR1F1O43749 312 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 CTSVO60911 334 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 WFS1O76024 890 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 OR4F21O95013 312 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 KRT6AP02538 564 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 KRT6BP04259 564 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 SLC35G6P0C7Q6 338 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 JMJD7P0C870 316 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 HGFP14210 728 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 TSPAN8P19075 237 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 AHRP35869 848 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 TSPAN7P41732 249 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 SCTRP47872 440 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 ID4P47928 161 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 SLC1A6P48664 564 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 KRT6CP48668 564 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 CLDN6P56747 220 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 ABCE1P61221 599 aaKnown RBP10.54□□□□□ -0.72
CHD4-202ENST00000430771 MEF2AQ02078 507 aaPredicted RBP10.54□□□□□ -0.72
CHD4-202ENST00000430771 RGS1Q08116 209 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 BST1Q10588 318 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 IFT88Q13099 833 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 RBBP5Q15291 538 aaKnown RBP10.54□□□□□ -0.72
CHD4-202ENST00000430771 TCTE1Q5JU00 501 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 TTC19Q6DKK2 380 aaPredicted RBP10.54□□□□□ -0.72
CHD4-202ENST00000430771 LETMD1Q6P1Q0 360 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 RAB11FIP2Q7L804 512 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 TMPRSS7Q7RTY8 843 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 ASPGQ86U10 573 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.54□□□□□ -0.72
CHD4-202ENST00000430771 TTC29Q8NA56 475 aaPredicted RBP10.54□□□□□ -0.72
CHD4-202ENST00000430771 MFSD9Q8NBP5 474 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 CAMKVQ8NCB2 501 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 OR6Y1Q8NGX8 325 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 OR8K5Q8NH50 307 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 WDR36Q8NI36 951 aaKnown RBP10.54□□□□□ -0.72
CHD4-202ENST00000430771 MAGEB18Q96M61 343 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 CDK15Q96Q40 435 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 SPNS1Q9H2V7 528 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 ELOVL6Q9H5J4 265 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 MANSC1Q9H8J5 431 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 ACSS2Q9NR19 701 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 ADGRE2Q9UHX3 823 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 RARRES3Q9UL19 164 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 SNX6Q9UNH7 406 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 TSC22D4Q9Y3Q8 395 aa10.54□□□□□ -0.72
CHD4-202ENST00000430771 MDC1Q14676 2089 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms