RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 FFAR3O14843 346 aa16.38■□□□□ 0.21
LINC00887-203ENST00000429578 HDAC3O15379 428 aa16.38■□□□□ 0.21
LINC00887-203ENST00000429578 GPR42O15529 346 aa16.38■□□□□ 0.21
LINC00887-203ENST00000429578 CHEK2O96017 543 aa16.38■□□□□ 0.21
LINC00887-203ENST00000429578 C9P02748 559 aa16.38■□□□□ 0.21
LINC00887-203ENST00000429578 TROVE2P10155 538 aaKnown RBP eCLIP16.38■□□□□ 0.21
LINC00887-203ENST00000429578 CDH3P22223 829 aa16.38■□□□□ 0.21
LINC00887-203ENST00000429578 CSF2RBP32927 897 aa16.38■□□□□ 0.21
LINC00887-203ENST00000429578 GRK3P35626 688 aa16.38■□□□□ 0.21
LINC00887-203ENST00000429578 REEP5Q00765 189 aa16.38■□□□□ 0.21
LINC00887-203ENST00000429578 CFHR1Q03591 330 aa16.38■□□□□ 0.21
LINC00887-203ENST00000429578 FAM219BQ5XKK7 198 aa16.38■□□□□ 0.21
LINC00887-203ENST00000429578 MED27Q6P2C8 311 aa16.38■□□□□ 0.21
LINC00887-203ENST00000429578 TMIGD1Q6UXZ0 262 aa16.38■□□□□ 0.21
LINC00887-203ENST00000429578 FAM92BQ6ZTR7 304 aa16.38■□□□□ 0.21
LINC00887-203ENST00000429578 USP53Q70EK8 1073 aa16.38■□□□□ 0.21
LINC00887-203ENST00000429578 PAQR7Q86WK9 346 aa16.38■□□□□ 0.21
LINC00887-203ENST00000429578 LAS2Q8IYD9 372 aa16.38■□□□□ 0.21
LINC00887-203ENST00000429578 KRT78Q8N1N4 520 aa16.38■□□□□ 0.21
LINC00887-203ENST00000429578 PIAS4Q8N2W9 510 aaPredicted RBP16.38■□□□□ 0.21
LINC00887-203ENST00000429578 UBE2E3Q969T4 207 aa16.38■□□□□ 0.21
LINC00887-203ENST00000429578 PRR11Q96HE9 360 aaPredicted RBP16.38■□□□□ 0.21
LINC00887-203ENST00000429578 CNTNAP3BQ96NU0 1288 aa16.38■□□□□ 0.21
LINC00887-203ENST00000429578 TGM7Q96PF1 710 aa16.38■□□□□ 0.21
LINC00887-203ENST00000429578 MAP3K3Q99759 626 aa16.38■□□□□ 0.21
LINC00887-203ENST00000429578 PLCD4Q9BRC7 762 aa16.38■□□□□ 0.21
LINC00887-203ENST00000429578 CNTNAP3Q9BZ76 1288 aa16.38■□□□□ 0.21
LINC00887-203ENST00000429578 LRRN3Q9H3W5 708 aa16.38■□□□□ 0.21
LINC00887-203ENST00000429578 KLHL20Q9Y2M5 609 aa16.38■□□□□ 0.21
LINC00887-203ENST00000429578 USH1CQ9Y6N9 552 aa16.38■□□□□ 0.21
LINC00887-203ENST00000429578 COL27A1Q8IZC6 1860 aaPredicted RBP16.38■□□□□ 0.21
LINC00887-203ENST00000429578 OR2A25A4D2G3 310 aa16.37■□□□□ 0.21
LINC00887-203ENST00000429578 TLCD2A6NGC4 264 aa16.37■□□□□ 0.21
LINC00887-203ENST00000429578 ZNF195O14628 629 aa16.37■□□□□ 0.21
LINC00887-203ENST00000429578 CPNE6O95741 557 aa16.37■□□□□ 0.21
LINC00887-203ENST00000429578 KRT6AP02538 564 aa16.37■□□□□ 0.21
LINC00887-203ENST00000429578 KRT6BP04259 564 aa16.37■□□□□ 0.21
LINC00887-203ENST00000429578 RPLP0P05388 317 aaKnown RBP16.37■□□□□ 0.21
LINC00887-203ENST00000429578 KRT6CP48668 564 aa16.37■□□□□ 0.21
LINC00887-203ENST00000429578 NOVA1P51513 510 aaKnown RBP16.37■□□□□ 0.21
LINC00887-203ENST00000429578 CCL7P80098 99 aa16.37■□□□□ 0.21
LINC00887-203ENST00000429578 TCHHL1Q5QJ38 904 aaPredicted RBP16.37■□□□□ 0.21
LINC00887-203ENST00000429578 FRG2Q64ET8 278 aa16.37■□□□□ 0.21
LINC00887-203ENST00000429578 FIGLAQ6QHK4 219 aa16.37■□□□□ 0.21
LINC00887-203ENST00000429578 CARFQ8N187 725 aa16.37■□□□□ 0.21
LINC00887-203ENST00000429578 ZNF740Q8NDX6 193 aa16.37■□□□□ 0.21
LINC00887-203ENST00000429578 OR7G3Q8NG95 312 aa16.37■□□□□ 0.21
LINC00887-203ENST00000429578 WDR20Q8TBZ3 569 aa16.37■□□□□ 0.21
LINC00887-203ENST00000429578 TWIST2Q8WVJ9 160 aa16.37■□□□□ 0.21
LINC00887-203ENST00000429578 REPS1Q96D71 796 aa16.37■□□□□ 0.21
LINC00887-203ENST00000429578 FRG2BQ96QU4 278 aa16.37■□□□□ 0.21
LINC00887-203ENST00000429578 CDC6Q99741 560 aa16.37■□□□□ 0.21
LINC00887-203ENST00000429578 SIKE1Q9BRV8 207 aa16.37■□□□□ 0.21
LINC00887-203ENST00000429578 SARGQ9BW04 601 aa16.37■□□□□ 0.21
LINC00887-203ENST00000429578 ZMYND15Q9H091 742 aa16.37■□□□□ 0.21
LINC00887-203ENST00000429578 FAM107BQ9H098 131 aa16.37■□□□□ 0.21
LINC00887-203ENST00000429578 ELOVL6Q9H5J4 265 aa16.37■□□□□ 0.21
LINC00887-203ENST00000429578 NT5DC2Q9H857 520 aa16.37■□□□□ 0.21
LINC00887-203ENST00000429578 NPHS2Q9NP85 383 aa16.37■□□□□ 0.21
LINC00887-203ENST00000429578 ZNF490Q9ULM2 529 aaPredicted RBP16.37■□□□□ 0.21
LINC00887-203ENST00000429578 SPTBN2O15020 2390 aa16.37■□□□□ 0.21
LINC00887-203ENST00000429578 TRBC2A0A5B9 178 aa16.36■□□□□ 0.21
LINC00887-203ENST00000429578 CASC3O15234 703 aaKnown RBP16.36■□□□□ 0.21
LINC00887-203ENST00000429578 NRP2O60462 931 aa16.36■□□□□ 0.21
LINC00887-203ENST00000429578 ULK1O75385 1050 aa16.36■□□□□ 0.21
LINC00887-203ENST00000429578 FAM107AO95990 144 aa16.36■□□□□ 0.21
LINC00887-203ENST00000429578 PVRP15151 417 aa16.36■□□□□ 0.21
LINC00887-203ENST00000429578 ST6GAL1P15907 406 aa16.36■□□□□ 0.21
LINC00887-203ENST00000429578 ALOX15P16050 662 aaPredicted RBP16.36■□□□□ 0.21
LINC00887-203ENST00000429578 RELAQ04206 551 aa16.36■□□□□ 0.21
LINC00887-203ENST00000429578 ZNF33BQ06732 778 aa16.36■□□□□ 0.21
LINC00887-203ENST00000429578 IFT88Q13099 833 aa16.36■□□□□ 0.21
LINC00887-203ENST00000429578 PDCD2Q16342 344 aaPredicted RBP16.36■□□□□ 0.21
LINC00887-203ENST00000429578 CLPPQ16740 277 aaPredicted RBP16.36■□□□□ 0.21
LINC00887-203ENST00000429578 C10orf62Q5T681 223 aaPredicted RBP16.36■□□□□ 0.21
LINC00887-203ENST00000429578 FCRL6Q6DN72 434 aa16.36■□□□□ 0.21
LINC00887-203ENST00000429578 TMEM71Q6P5X7 295 aa16.36■□□□□ 0.21
LINC00887-203ENST00000429578 RNF165Q6ZSG1 346 aa16.36■□□□□ 0.21
LINC00887-203ENST00000429578 USP7Q93009 1102 aa16.36■□□□□ 0.21
LINC00887-203ENST00000429578 TRAPPC9Q96Q05 1148 aa16.36■□□□□ 0.21
LINC00887-203ENST00000429578 CCT8L2Q96SF2 557 aa16.36■□□□□ 0.21
LINC00887-203ENST00000429578 DPYSL5Q9BPU6 564 aa16.36■□□□□ 0.21
LINC00887-203ENST00000429578 NUDT22Q9BRQ3 303 aa16.36■□□□□ 0.21
LINC00887-203ENST00000429578 TUBB1Q9H4B7 451 aa16.36■□□□□ 0.21
LINC00887-203ENST00000429578 PSD3Q9NYI0 1048 aa16.36■□□□□ 0.21
LINC00887-203ENST00000429578 TSC22D4Q9Y3Q8 395 aa16.36■□□□□ 0.21
LINC00887-203ENST00000429578 FEZF1A0PJY2 475 aa16.36■□□□□ 0.21
LINC00887-203ENST00000429578 MANBAO00462 879 aa16.36■□□□□ 0.21
LINC00887-203ENST00000429578 KIF1CO43896 1103 aaKnown RBP16.36■□□□□ 0.21
LINC00887-203ENST00000429578 SKAP2O75563 359 aaPredicted RBP16.36■□□□□ 0.21
LINC00887-203ENST00000429578 JUNP05412 331 aaKnown RBP16.36■□□□□ 0.21
LINC00887-203ENST00000429578 EZRP15311 586 aaKnown RBP16.36■□□□□ 0.21
LINC00887-203ENST00000429578 BTKQ06187 659 aa16.36■□□□□ 0.21
LINC00887-203ENST00000429578 MAVSQ7Z434 540 aa16.36■□□□□ 0.21
LINC00887-203ENST00000429578 TBC1D19Q8N5T2 526 aa16.36■□□□□ 0.21
LINC00887-203ENST00000429578 SELENOMQ8WWX9 145 aa16.36■□□□□ 0.21
LINC00887-203ENST00000429578 THOC1Q96FV9 657 aaKnown RBP16.36■□□□□ 0.21
LINC00887-203ENST00000429578 CCT7Q99832 543 aa16.36■□□□□ 0.21
LINC00887-203ENST00000429578 NUF2Q9BZD4 464 aa16.36■□□□□ 0.21
LINC00887-203ENST00000429578 PFDN4Q9NQP4 134 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms