RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 LANCL3Q6ZV70 420 aa17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 CPEB2Q7Z5Q1 589 aaKnown RBP17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 PRUNE1Q86TP1 453 aa17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 SPPL2CQ8IUH8 684 aa17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 CEP97Q8IW35 865 aa17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 ARHGEF39Q8N4T4 335 aa17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 ADAMTS18Q8TE60 1221 aa17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 THAP3Q8WTV1 239 aaPredicted RBP17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 ZNF354BQ96LW1 612 aa17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 GPR137Q96N19 417 aa17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 TRIM5Q9C035 493 aa17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 GPAMQ9HCL2 828 aa17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 FAM114A2Q9NRY5 505 aa17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 ABCF3Q9NUQ8 709 aa17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 ZNF148Q9UQR1 794 aa17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 REXO2Q9Y3B8 237 aaKnown RBP17.32■□□□□ 0.36
UPK3BP1-201ENST00000428678 NPIPA5E9PKD4 350 aa17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 LIASO43766 372 aa17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 NIPSNAP2O75323 286 aa17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 STATHP02808 62 aa17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 ATP5DP30049 168 aa17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 FMO4P31512 558 aa17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 AVPR1BP47901 424 aa17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 ST13P50502 369 aaKnown RBP17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 PRDX1Q06830 199 aaKnown RBP17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 TUBA3CQ13748 450 aa17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 OASLQ15646 514 aaKnown RBP17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 NDUFA9Q16795 377 aa17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 KRTCAP3Q53RY4 240 aa17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 PLAG1Q6DJT9 500 aa17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 ZNF425Q6IV72 752 aa17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 TUBA3EQ6PEY2 450 aa17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 CDH24Q86UP0 819 aa17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 OR9A4Q8NGU2 314 aa17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 CHTF18Q8WVB6 975 aa17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 SIGLEC12Q96PQ1 595 aa17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 CYTH2Q99418 400 aa17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 UTP23Q9BRU9 249 aaKnown RBP17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 HES7Q9BYE0 225 aa17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 KCNK13Q9HB14 408 aa17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 TREX1Q9NSU2 369 aa17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 ANKRD10Q9NXR5 420 aa17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 C19orf25Q9UFG5 118 aaPredicted RBP17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 NPIPA1Q9UND3 350 aa17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 ZNF835Q9Y2P0 537 aa17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 MEMO1Q9Y316 297 aa17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 PCDHGB6Q9Y5F9 930 aa17.31■□□□□ 0.36
UPK3BP1-201ENST00000428678 SCN3AQ9NY46 2000 aa17.3■□□□□ 0.36
UPK3BP1-201ENST00000428678 MYO1CO00159 1063 aa17.3■□□□□ 0.36
UPK3BP1-201ENST00000428678 HAT1O14929 419 aa17.3■□□□□ 0.36
UPK3BP1-201ENST00000428678 CATP04040 527 aaKnown RBP17.3■□□□□ 0.36
UPK3BP1-201ENST00000428678 ETS1P14921 441 aa17.3■□□□□ 0.36
UPK3BP1-201ENST00000428678 CAPN3P20807 821 aa17.3■□□□□ 0.36
UPK3BP1-201ENST00000428678 EEF1DP29692 281 aaKnown RBP17.3■□□□□ 0.36
UPK3BP1-201ENST00000428678 PNLIPRP1P54315 467 aa17.3■□□□□ 0.36
UPK3BP1-201ENST00000428678 FAM53BQ14153 422 aa17.3■□□□□ 0.36
UPK3BP1-201ENST00000428678 GBX1Q14549 363 aa17.3■□□□□ 0.36
UPK3BP1-201ENST00000428678 ARHGAP19Q14CB8 494 aa17.3■□□□□ 0.36
UPK3BP1-201ENST00000428678 OR1C1Q15619 314 aa17.3■□□□□ 0.36
UPK3BP1-201ENST00000428678 Q6ZPB1 254 aaPredicted RBP17.3■□□□□ 0.36
UPK3BP1-201ENST00000428678 NCCRP1Q6ZVX7 275 aaPredicted RBP17.3■□□□□ 0.36
UPK3BP1-201ENST00000428678 KIAA1328Q86T90 577 aa17.3■□□□□ 0.36
UPK3BP1-201ENST00000428678 PLD3Q8IV08 490 aa17.3■□□□□ 0.36
UPK3BP1-201ENST00000428678 SYCE1Q8N0S2 351 aa17.3■□□□□ 0.36
UPK3BP1-201ENST00000428678 PPFIBP2Q8ND30 876 aa17.3■□□□□ 0.36
UPK3BP1-201ENST00000428678 MDS2Q8NDY4 140 aa17.3■□□□□ 0.36
UPK3BP1-201ENST00000428678 ACRBPQ8NEB7 543 aa17.3■□□□□ 0.36
UPK3BP1-201ENST00000428678 BIRC8Q96P09 236 aa17.3■□□□□ 0.36
UPK3BP1-201ENST00000428678 PKP4Q99569 1192 aa17.3■□□□□ 0.36
UPK3BP1-201ENST00000428678 NAV3Q8IVL0 2385 aa17.3■□□□□ 0.36
UPK3BP1-201ENST00000428678 NIPBLQ6KC79 2804 aaeCLIP17.29■□□□□ 0.36
UPK3BP1-201ENST00000428678 ZNF839A8K0R7 811 aa17.29■□□□□ 0.36
UPK3BP1-201ENST00000428678 H3BMM5 538 aa17.29■□□□□ 0.36
UPK3BP1-201ENST00000428678 CHRM3P20309 590 aa17.29■□□□□ 0.36
UPK3BP1-201ENST00000428678 NMBRP28336 390 aa17.29■□□□□ 0.36
UPK3BP1-201ENST00000428678 HSD17B2P37059 387 aa17.29■□□□□ 0.36
UPK3BP1-201ENST00000428678 CD96P40200 585 aa17.29■□□□□ 0.36
UPK3BP1-201ENST00000428678 SNRPNP63162 240 aaKnown RBP17.29■□□□□ 0.36
UPK3BP1-201ENST00000428678 TESK1Q15569 626 aa17.29■□□□□ 0.36
UPK3BP1-201ENST00000428678 MEP1AQ16819 746 aa17.29■□□□□ 0.36
UPK3BP1-201ENST00000428678 KLHL38Q2WGJ6 581 aa17.29■□□□□ 0.36
UPK3BP1-201ENST00000428678 ACSBG2Q5FVE4 666 aa17.29■□□□□ 0.36
UPK3BP1-201ENST00000428678 MRNIPQ6NTE8 343 aa17.29■□□□□ 0.36
UPK3BP1-201ENST00000428678 SDCCAG8Q86SQ7 713 aaPredicted RBP17.29■□□□□ 0.36
UPK3BP1-201ENST00000428678 CRLF3Q8IUI8 442 aa17.29■□□□□ 0.36
UPK3BP1-201ENST00000428678 CCDC89Q8N998 374 aa17.29■□□□□ 0.36
UPK3BP1-201ENST00000428678 LPGAT1Q92604 370 aa17.29■□□□□ 0.36
UPK3BP1-201ENST00000428678 PANX2Q96RD6 677 aa17.29■□□□□ 0.36
UPK3BP1-201ENST00000428678 HCN3Q9P1Z3 774 aa17.29■□□□□ 0.36
UPK3BP1-201ENST00000428678 OR2W5A6NFC9 320 aa17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 GOLGA8KD6RF30 607 aa17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 GOLGA8TH3BQL2 631 aa17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 SMAPO00193 183 aa17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 PSIP1O75475 530 aaKnown RBP17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 VAPBO95292 243 aa17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 SLC16A8O95907 504 aa17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 CD46P15529 392 aa17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 ABOP16442 354 aa17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 PTMSP20962 102 aa17.28■□□□□ 0.36
UPK3BP1-201ENST00000428678 ABATP80404 500 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms