RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 ARFIP1P53367 373 aa8.72□□□□□ -1.01
SMC1A-203ENST00000428014 TERF1P54274 439 aa8.72□□□□□ -1.01
SMC1A-203ENST00000428014 RAB10P61026 200 aa8.72□□□□□ -1.01
SMC1A-203ENST00000428014 SRSF6Q13247 344 aaKnown RBP8.72□□□□□ -1.01
SMC1A-203ENST00000428014 FASTKQ14296 549 aaKnown RBP8.72□□□□□ -1.01
SMC1A-203ENST00000428014 PHKG1Q16816 387 aa8.72□□□□□ -1.01
SMC1A-203ENST00000428014 WASHC2DQ5SRD0 308 aa8.72□□□□□ -1.01
SMC1A-203ENST00000428014 SULT1C3Q6IMI6 304 aa8.72□□□□□ -1.01
SMC1A-203ENST00000428014 IGFL3Q6UXB1 125 aa8.72□□□□□ -1.01
SMC1A-203ENST00000428014 ANKMY2Q8IV38 441 aa8.72□□□□□ -1.01
SMC1A-203ENST00000428014 ZNF843Q8N446 348 aa8.72□□□□□ -1.01
SMC1A-203ENST00000428014 ENDOVQ8N8Q3 282 aaKnown RBP8.72□□□□□ -1.01
SMC1A-203ENST00000428014 EXD3Q8N9H8 876 aa8.72□□□□□ -1.01
SMC1A-203ENST00000428014 CAMKVQ8NCB2 501 aa8.72□□□□□ -1.01
SMC1A-203ENST00000428014 PDPRQ8NCN5 879 aa8.72□□□□□ -1.01
SMC1A-203ENST00000428014 EXTL1Q92935 676 aa8.72□□□□□ -1.01
SMC1A-203ENST00000428014 KIAA1191Q96A73 305 aa8.72□□□□□ -1.01
SMC1A-203ENST00000428014 WDR34Q96EX3 536 aa8.72□□□□□ -1.01
SMC1A-203ENST00000428014 ELMO2Q96JJ3 720 aa8.72□□□□□ -1.01
SMC1A-203ENST00000428014 FMO2Q99518 471 aa8.72□□□□□ -1.01
SMC1A-203ENST00000428014 SLC6A16Q9GZN6 736 aa8.72□□□□□ -1.01
SMC1A-203ENST00000428014 SPRTNQ9H040 489 aaPredicted RBP8.72□□□□□ -1.01
SMC1A-203ENST00000428014 DPH5Q9H2P9 285 aa8.72□□□□□ -1.01
SMC1A-203ENST00000428014 PPCSQ9HAB8 311 aa8.72□□□□□ -1.01
SMC1A-203ENST00000428014 MKKSQ9NPJ1 570 aaPredicted RBP8.72□□□□□ -1.01
SMC1A-203ENST00000428014 IFT80Q9P2H3 777 aaPredicted RBP8.72□□□□□ -1.01
SMC1A-203ENST00000428014 GPN3Q9UHW5 284 aaPredicted RBP8.72□□□□□ -1.01
SMC1A-203ENST00000428014 RUVBL2Q9Y230 463 aaKnown RBP8.72□□□□□ -1.01
SMC1A-203ENST00000428014 MAN2B2Q9Y2E5 1009 aa8.72□□□□□ -1.01
SMC1A-203ENST00000428014 TSC22D4Q9Y3Q8 395 aa8.72□□□□□ -1.01
SMC1A-203ENST00000428014 MAP4K5Q9Y4K4 846 aa8.72□□□□□ -1.01
SMC1A-203ENST00000428014 URADA6NGE7 173 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 H0YGG7 62 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 SLC35G6P0C7Q6 338 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 COL6A2P12110 1019 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 GNAZP19086 355 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 SERPINB1P30740 379 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 FOLR3P41439 243 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 CASP2P42575 452 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 SLC6A12P48065 614 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 SERPINB9P50453 376 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 CCR8P51685 355 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 ARF3P61204 181 aaPredicted RBP8.71□□□□□ -1.02
SMC1A-203ENST00000428014 CSNK1G2P78368 415 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 MEF2AQ02078 507 aaPredicted RBP8.71□□□□□ -1.02
SMC1A-203ENST00000428014 TGFBIQ15582 683 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 TBCCQ15814 346 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 NKG7Q16617 165 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 KBTBD12Q3ZCT8 623 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 C10orf62Q5T681 223 aaPredicted RBP8.71□□□□□ -1.02
SMC1A-203ENST00000428014 TMEM207Q6UWW9 146 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 HOMEZQ8IX15 550 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 AFAP1L2Q8N4X5 818 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 CSNK1A1LQ8N752 337 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 TRPV3Q8NET8 790 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 C9orf43Q8TAL5 461 aaPredicted RBP8.71□□□□□ -1.02
SMC1A-203ENST00000428014 STAG3L4Q8TBR4 150 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 RHBDF1Q96CC6 855 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 PWWP2AQ96N64 755 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 OR1F2PQ96R84 312 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 SMAD5Q99717 465 aaKnown RBP8.71□□□□□ -1.02
SMC1A-203ENST00000428014 NRTNQ99748 197 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 DRC3Q9H069 523 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 AKIRIN1Q9H9L7 192 aaPredicted RBP8.71□□□□□ -1.02
SMC1A-203ENST00000428014 L2HGDHQ9H9P8 463 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 NMRAL1Q9HBL8 299 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 ZNF304Q9HCX3 659 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 SMYD2Q9NRG4 433 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 SLC22A11Q9NSA0 550 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 CTNNAL1Q9UBT7 734 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 ZNF282Q9UDV7 671 aaPredicted RBP8.71□□□□□ -1.02
SMC1A-203ENST00000428014 ZFP69BQ9UJL9 534 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 ADAMTS6Q9UKP5 1117 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 TMCO1Q9UM00 188 aa8.71□□□□□ -1.02
SMC1A-203ENST00000428014 RP1L1Q8IWN7 2480 aaPredicted RBP8.71□□□□□ -1.02
SMC1A-203ENST00000428014 A0A087X1B8 175 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 LOC102723996A0A087X1L8 192 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 SYCE1LA8MT33 242 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 AGPSO00116 658 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 PEX12O00623 359 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 SUV39H1O43463 412 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 UGDHO60701 494 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 KATNA1O75449 491 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 SYF2O95926 243 aaKnown RBP8.7□□□□□ -1.02
SMC1A-203ENST00000428014 SERPINA6P08185 405 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 CD1DP15813 335 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 PSMB5P28074 263 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 TNFRSF8P28908 595 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 MAGEA12P43365 314 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 AVPR1BP47901 424 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 OCA2Q04671 838 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 AIMP2Q13155 320 aaKnown RBP8.7□□□□□ -1.02
SMC1A-203ENST00000428014 NAE1Q13564 534 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 IL10RAQ13651 578 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 ERV3-1Q14264 604 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 USP10Q14694 798 aaKnown RBP8.7□□□□□ -1.02
SMC1A-203ENST00000428014 HERC3Q15034 1050 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 RASA2Q15283 850 aa8.7□□□□□ -1.02
SMC1A-203ENST00000428014 ZXDCQ2QGD7 858 aaPredicted RBP8.7□□□□□ -1.02
SMC1A-203ENST00000428014 THEMIS2Q5TEJ8 643 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms