RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 PNLIPP16233 465 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 EPB42P16452 691 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 CCNG1P51959 295 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 MTTPP55157 894 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 SMU1Q2TAY7 513 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 MMEL1Q495T6 779 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 AGKQ53H12 422 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 AAGABQ6PD74 315 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 HACD2Q6Y1H2 254 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 USP53Q70EK8 1073 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 SPRED1Q7Z699 444 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 PCYOX1LQ8NBM8 494 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 METTL6Q8TCB7 284 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 SH3KBP1Q96B97 665 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 C3orf30Q96M34 536 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 NTMT1Q9BV86 223 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 IPPKQ9H8X2 491 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 STOML1Q9UBI4 398 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 HEBP2Q9Y5Z4 205 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 A0A1W2PQM1 296 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 KRT87PA6NCN2 255 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 GFYI3L273 518 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 GUCA1CO95843 209 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 RPLP0P05388 317 aaKnown RBP15.07■□□□□ 0
SHOX2-202ENST00000425436 GP1BAP07359 652 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 LINC00032P0C843 101 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 PRR35P0CG20 571 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 HGFP14210 728 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 TYRP1P17643 537 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 GCKP35557 465 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 FOXA1P55317 472 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 PLCL1Q15111 1095 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 XKR7Q5GH72 579 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 UBE2R2Q712K3 238 aaPredicted RBP15.07■□□□□ 0
SHOX2-202ENST00000425436 AVL9Q8NBF6 648 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 RCN3Q96D15 328 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.07■□□□□ 0
SHOX2-202ENST00000425436 TRIT1Q9H3H1 467 aaKnown RBP15.07■□□□□ 0
SHOX2-202ENST00000425436 LRRN3Q9H3W5 708 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 TUBB1Q9H4B7 451 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 SDR39U1Q9NRG7 319 aaPredicted RBP15.07■□□□□ 0
SHOX2-202ENST00000425436 ARL15Q9NXU5 204 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 POLG2Q9UHN1 485 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 ADAMTS6Q9UKP5 1117 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 ATXN7L1Q9ULK2 861 aaPredicted RBP15.07■□□□□ 0
SHOX2-202ENST00000425436 PLAGL1Q9UM63 463 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 NDUFAF1Q9Y375 327 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 PCDHGA1Q9Y5H4 931 aa15.07■□□□□ 0
SHOX2-202ENST00000425436 ANKRD12Q6UB98 2062 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 IGHV1OR21-1A0A087WYE8 117 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 ATP6AP2A0A1C7CYW4 349 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 DYTNA2CJ06 578 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 HAX1O00165 279 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 TAPBPO15533 448 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 ATP6AP2O75787 350 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 PSMG1O95456 288 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 GPX3P22352 226 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 CD1CP29017 333 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 HMOX2P30519 316 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 GPR3P46089 330 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 BDKRB1P46663 353 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 HSPA7P48741 367 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 ERVPABLB-1P60509 514 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 AP2B1P63010 937 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 ILKQ13418 452 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 NR1D2Q14995 579 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 PHKG1Q16816 387 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 CCSMST1Q4G0I0 132 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 COQ5Q5HYK3 327 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 BNC2Q6ZN30 1099 aaPredicted RBP15.06■□□□□ 0
SHOX2-202ENST00000425436 RIPOR1Q6ZS17 1223 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 LRRC70Q7Z2Q7 622 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 TBC1D21Q8IYX1 336 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 OR4E2Q8NGC2 313 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 OR5K2Q8NHB8 316 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 WDR60Q8WVS4 1066 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 ATL1Q8WXF7 558 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 ROPN1LQ96C74 230 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 AHCYL2Q96HN2 611 aaKnown RBP15.06■□□□□ 0
SHOX2-202ENST00000425436 FOPNLQ96NB1 174 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 XKR8Q9H6D3 395 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 KIR3DX1Q9H7L2 352 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 MVB12BQ9H7P6 319 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 STX18Q9P2W9 335 aaKnown RBP15.06■□□□□ 0
SHOX2-202ENST00000425436 TRPS1Q9UHF7 1281 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 ZNF225Q9UK10 706 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 PDE10AQ9Y233 779 aa15.06■□□□□ 0
SHOX2-202ENST00000425436 SLC28A1O00337 649 aa15.05■□□□□ -0
SHOX2-202ENST00000425436 OR7A17O14581 309 aa15.05■□□□□ -0
SHOX2-202ENST00000425436 NRP2O60462 931 aa15.05■□□□□ -0
SHOX2-202ENST00000425436 UBXN7O94888 489 aa15.05■□□□□ -0
SHOX2-202ENST00000425436 DKK1O94907 266 aa15.05■□□□□ -0
SHOX2-202ENST00000425436 OR4F21O95013 312 aa15.05■□□□□ -0
SHOX2-202ENST00000425436 C1orf105O95561 183 aa15.05■□□□□ -0
SHOX2-202ENST00000425436 AMD1P17707 334 aa15.05■□□□□ -0
SHOX2-202ENST00000425436 MAP4P27816 1152 aaKnown RBP15.05■□□□□ -0
SHOX2-202ENST00000425436 NDUFS1P28331 727 aa15.05■□□□□ -0
SHOX2-202ENST00000425436 ARL1P40616 181 aaPredicted RBP15.05■□□□□ -0
SHOX2-202ENST00000425436 ERVK-8P63133 956 aa15.05■□□□□ -0
SHOX2-202ENST00000425436 E2F1Q01094 437 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms