RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 VAPBO95292 243 aa11.61□□□□□ -0.55
HLA-DQB3-203ENST00000425319 NSA2O95478 260 aaKnown RBP11.61□□□□□ -0.55
HLA-DQB3-203ENST00000425319 SPTBP11277 2137 aa11.61□□□□□ -0.55
HLA-DQB3-203ENST00000425319 ADARP55265 1226 aaKnown RBP11.61□□□□□ -0.55
HLA-DQB3-203ENST00000425319 RPS15AP62244 130 aaKnown RBP11.61□□□□□ -0.55
HLA-DQB3-203ENST00000425319 BASP1P80723 227 aaKnown RBP11.61□□□□□ -0.55
HLA-DQB3-203ENST00000425319 KLF1Q13351 362 aaPredicted RBP11.61□□□□□ -0.55
HLA-DQB3-203ENST00000425319 THOC5Q13769 683 aaKnown RBP11.61□□□□□ -0.55
HLA-DQB3-203ENST00000425319 FASTKQ14296 549 aaKnown RBP11.61□□□□□ -0.55
HLA-DQB3-203ENST00000425319 SEMA3AQ14563 771 aa11.61□□□□□ -0.55
HLA-DQB3-203ENST00000425319 PCOLCEQ15113 449 aa11.61□□□□□ -0.55
HLA-DQB3-203ENST00000425319 C3AR1Q16581 482 aa11.61□□□□□ -0.55
HLA-DQB3-203ENST00000425319 HKDC1Q2TB90 917 aa11.61□□□□□ -0.55
HLA-DQB3-203ENST00000425319 KLHL38Q2WGJ6 581 aa11.61□□□□□ -0.55
HLA-DQB3-203ENST00000425319 SLC25A25Q6KCM7 469 aa11.61□□□□□ -0.55
HLA-DQB3-203ENST00000425319 LKAAEAR1Q8TD35 194 aa11.61□□□□□ -0.55
HLA-DQB3-203ENST00000425319 OR2A5Q96R48 311 aa11.61□□□□□ -0.55
HLA-DQB3-203ENST00000425319 SPOCK3Q9BQ16 436 aa11.61□□□□□ -0.55
HLA-DQB3-203ENST00000425319 KLHL1Q9NR64 748 aa11.61□□□□□ -0.55
HLA-DQB3-203ENST00000425319 SAMD15Q9P1V8 674 aa11.61□□□□□ -0.55
HLA-DQB3-203ENST00000425319 TSR3Q9UJK0 312 aaKnown RBP11.61□□□□□ -0.55
HLA-DQB3-203ENST00000425319 NPIPA1Q9UND3 350 aa11.61□□□□□ -0.55
HLA-DQB3-203ENST00000425319 MEMO1Q9Y316 297 aa11.61□□□□□ -0.55
HLA-DQB3-203ENST00000425319 A0A1W2PPV9 198 aa11.6□□□□□ -0.55
HLA-DQB3-203ENST00000425319 GRID2IPA4D2P6 1211 aa11.6□□□□□ -0.55
HLA-DQB3-203ENST00000425319 CTAGE9A4FU28 777 aa11.6□□□□□ -0.55
HLA-DQB3-203ENST00000425319 SMAPO00193 183 aa11.6□□□□□ -0.55
HLA-DQB3-203ENST00000425319 FFAR3O14843 346 aa11.6□□□□□ -0.55
HLA-DQB3-203ENST00000425319 GPR42O15529 346 aa11.6□□□□□ -0.55
HLA-DQB3-203ENST00000425319 PSIP1O75475 530 aaKnown RBP11.6□□□□□ -0.55
HLA-DQB3-203ENST00000425319 ENO3P13929 434 aaPredicted RBP11.6□□□□□ -0.55
HLA-DQB3-203ENST00000425319 CDK16Q00536 496 aa11.6□□□□□ -0.55
HLA-DQB3-203ENST00000425319 SNX1Q13596 522 aa11.6□□□□□ -0.55
HLA-DQB3-203ENST00000425319 OR1C1Q15619 314 aa11.6□□□□□ -0.55
HLA-DQB3-203ENST00000425319 NSDHLQ15738 373 aa11.6□□□□□ -0.55
HLA-DQB3-203ENST00000425319 MAPKAPK3Q16644 382 aa11.6□□□□□ -0.55
HLA-DQB3-203ENST00000425319 CCSMST1Q4G0I0 132 aa11.6□□□□□ -0.55
HLA-DQB3-203ENST00000425319 ARMC3Q5W041 872 aa11.6□□□□□ -0.55
HLA-DQB3-203ENST00000425319 LRRC8EQ6NSJ5 796 aa11.6□□□□□ -0.55
HLA-DQB3-203ENST00000425319 UGT3A1Q6NUS8 523 aa11.6□□□□□ -0.55
HLA-DQB3-203ENST00000425319 PAOXQ6QHF9 649 aa11.6□□□□□ -0.55
HLA-DQB3-203ENST00000425319 BEST3Q8N1M1 668 aa11.6□□□□□ -0.55
HLA-DQB3-203ENST00000425319 LRRC57Q8N9N7 239 aa11.6□□□□□ -0.55
HLA-DQB3-203ENST00000425319 OR51Q1Q8NH59 317 aa11.6□□□□□ -0.55
HLA-DQB3-203ENST00000425319 PKP4Q99569 1192 aa11.6□□□□□ -0.55
HLA-DQB3-203ENST00000425319 EIF2B3Q9NR50 452 aaKnown RBP11.6□□□□□ -0.55
HLA-DQB3-203ENST00000425319 LRFN1Q9P244 771 aa11.6□□□□□ -0.55
HLA-DQB3-203ENST00000425319 KLHL42Q9P2K6 505 aa11.6□□□□□ -0.55
HLA-DQB3-203ENST00000425319 EDARQ9UNE0 448 aa11.6□□□□□ -0.55
HLA-DQB3-203ENST00000425319 R3HDM2Q9Y2K5 976 aaKnown RBP11.6□□□□□ -0.55
HLA-DQB3-203ENST00000425319 CRYL1Q9Y2S2 319 aa11.6□□□□□ -0.55
HLA-DQB3-203ENST00000425319 E9PLN8 166 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 KLRC4-KLRK1H3BQV0 150 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 H7BY64 318 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 MYO1CO00159 1063 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 FCHO1O14526 889 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 NDC80O14777 642 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 FOXS1O43638 330 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 FTCDO95954 541 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 SP1P08047 785 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 HIST1H2AGP0C0S8 130 aaPredicted RBP11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 SLC35G6P0C7Q6 338 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 MPC1LP0DKB6 136 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 CD1EP15812 388 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 HIST1H2ADP20671 130 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 OGNP20774 298 aaKnown RBP11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 JAK1P23458 1154 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 CCND1P24385 295 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 CD96P40200 585 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 GRIA1P42261 906 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 XCR1P46094 333 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 MAT1AQ00266 395 aaKnown RBP11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 TLE4Q04727 773 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 TUBA3CQ13748 450 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 H3F3CQ6NXT2 135 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 CASC4Q6P4E1 433 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 TUBA3EQ6PEY2 450 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 Q6ZPB1 254 aaPredicted RBP11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 ZC3H7AQ8IWR0 971 aaKnown RBP11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 LGI4Q8N135 537 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 DTWD1Q8N5C7 304 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 RNF10Q8N5U6 811 aaKnown RBP11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 AMER3Q8N944 861 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 POGLUT1Q8NBL1 392 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 FBXO15Q8NCQ5 510 aaPredicted RBP11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 ARMC2Q8NEN0 867 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 PHF10Q8WUB8 498 aaKnown RBP11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 ASB5Q8WWX0 329 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 ATG4AQ8WYN0 398 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 HIST1H2AHQ96KK5 128 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 PRAP1Q96NZ9 151 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 HIST1H2AJQ99878 128 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 VKORC1Q9BQB6 163 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 H2AFJQ9BTM1 129 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 VN1R1Q9GZP7 353 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 MMP25Q9NPA2 562 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 HOMER3Q9NSC5 361 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 INTS10Q9NVR2 710 aaKnown RBP11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 MARCH4Q9P2E8 410 aaPredicted RBP11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 TINAGQ9UJW2 476 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms