RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 LINGO1Q96FE5 620 aa17.18■□□□□ 0.34
VCP-202ENST00000417448 VPS39Q96JC1 886 aa17.18■□□□□ 0.34
VCP-202ENST00000417448 MCMBPQ9BTE3 642 aa17.18■□□□□ 0.34
VCP-202ENST00000417448 ANKZF1Q9H8Y5 726 aa17.18■□□□□ 0.34
VCP-202ENST00000417448 TAS2R13Q9NYV9 303 aa17.18■□□□□ 0.34
VCP-202ENST00000417448 ADAMTS6Q9UKP5 1117 aa17.18■□□□□ 0.34
VCP-202ENST00000417448 IKZF3Q9UKT9 509 aa17.18■□□□□ 0.34
VCP-202ENST00000417448 POMT2Q9UKY4 750 aa17.18■□□□□ 0.34
VCP-202ENST00000417448 SLC39A10Q9ULF5 831 aa17.18■□□□□ 0.34
VCP-202ENST00000417448 MSL3P1P0C860 447 aa17.17■□□□□ 0.34
VCP-202ENST00000417448 ATXN8OSP0DMR3 200 aa17.17■□□□□ 0.34
VCP-202ENST00000417448 CBSLP0DN79 551 aa17.17■□□□□ 0.34
VCP-202ENST00000417448 COX6B1P14854 86 aa17.17■□□□□ 0.34
VCP-202ENST00000417448 ST6GAL1P15907 406 aa17.17■□□□□ 0.34
VCP-202ENST00000417448 PEBP1P30086 187 aaKnown RBP17.17■□□□□ 0.34
VCP-202ENST00000417448 CBSP35520 551 aa17.17■□□□□ 0.34
VCP-202ENST00000417448 FOLR3P41439 243 aa17.17■□□□□ 0.34
VCP-202ENST00000417448 KCNK10P57789 538 aa17.17■□□□□ 0.34
VCP-202ENST00000417448 PDAP1Q13442 181 aaKnown RBP17.17■□□□□ 0.34
VCP-202ENST00000417448 ZNF169Q14929 603 aaPredicted RBP17.17■□□□□ 0.34
VCP-202ENST00000417448 UAP1Q16222 522 aaPredicted RBP17.17■□□□□ 0.34
VCP-202ENST00000417448 TTLL9Q3SXZ7 439 aa17.17■□□□□ 0.34
VCP-202ENST00000417448 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.17■□□□□ 0.34
VCP-202ENST00000417448 MLIPQ5VWP3 458 aa17.17■□□□□ 0.34
VCP-202ENST00000417448 FAM45BPQ6NSW5 357 aa17.17■□□□□ 0.34
VCP-202ENST00000417448 BNC2Q6ZN30 1099 aaPredicted RBP17.17■□□□□ 0.34
VCP-202ENST00000417448 DCUN1D3Q8IWE4 304 aa17.17■□□□□ 0.34
VCP-202ENST00000417448 LINC01555Q8NAE3 123 aa17.17■□□□□ 0.34
VCP-202ENST00000417448 DNAJB14Q8TBM8 379 aa17.17■□□□□ 0.34
VCP-202ENST00000417448 FAM45AQ8TCE6 357 aa17.17■□□□□ 0.34
VCP-202ENST00000417448 CDKL2Q92772 493 aa17.17■□□□□ 0.34
VCP-202ENST00000417448 DLG3Q92796 817 aa17.17■□□□□ 0.34
VCP-202ENST00000417448 CCDC120Q96HB5 630 aa17.17■□□□□ 0.34
VCP-202ENST00000417448 FOPNLQ96NB1 174 aa17.17■□□□□ 0.34
VCP-202ENST00000417448 MENTQ9BUN1 341 aa17.17■□□□□ 0.34
VCP-202ENST00000417448 RHOJQ9H4E5 214 aa17.17■□□□□ 0.34
VCP-202ENST00000417448 POLG2Q9UHN1 485 aa17.17■□□□□ 0.34
VCP-202ENST00000417448 KLHL20Q9Y2M5 609 aa17.17■□□□□ 0.34
VCP-202ENST00000417448 CACNA1CQ13936 2221 aa17.17■□□□□ 0.34
VCP-202ENST00000417448 ABCA2Q9BZC7 2435 aa17.16■□□□□ 0.34
VCP-202ENST00000417448 JRKO75564 520 aa17.16■□□□□ 0.34
VCP-202ENST00000417448 SLU7O95391 586 aaKnown RBP17.16■□□□□ 0.34
VCP-202ENST00000417448 SYF2O95926 243 aaKnown RBP17.16■□□□□ 0.34
VCP-202ENST00000417448 IGHEP01854 428 aa17.16■□□□□ 0.34
VCP-202ENST00000417448 UMODP07911 640 aa17.16■□□□□ 0.34
VCP-202ENST00000417448 CHRM5P08912 532 aaPredicted RBP17.16■□□□□ 0.34
VCP-202ENST00000417448 AGXTP21549 392 aa17.16■□□□□ 0.34
VCP-202ENST00000417448 CDH3P22223 829 aa17.16■□□□□ 0.34
VCP-202ENST00000417448 PKLRP30613 574 aa17.16■□□□□ 0.34
VCP-202ENST00000417448 STX2P32856 288 aa17.16■□□□□ 0.34
VCP-202ENST00000417448 TDGF1P3P51864 188 aa17.16■□□□□ 0.34
VCP-202ENST00000417448 BMPR2Q13873 1038 aa17.16■□□□□ 0.34
VCP-202ENST00000417448 FASTKQ14296 549 aaKnown RBP17.16■□□□□ 0.34
VCP-202ENST00000417448 SPATA6LQ8N4H0 392 aa17.16■□□□□ 0.34
VCP-202ENST00000417448 OR2Y1Q8NGV0 311 aa17.16■□□□□ 0.34
VCP-202ENST00000417448 DENND1AQ8TEH3 1009 aa17.16■□□□□ 0.34
VCP-202ENST00000417448 ANKRD49Q8WVL7 239 aa17.16■□□□□ 0.34
VCP-202ENST00000417448 CNDP1Q96KN2 507 aa17.16■□□□□ 0.34
VCP-202ENST00000417448 GBP5Q96PP8 586 aa17.16■□□□□ 0.34
VCP-202ENST00000417448 PKP4Q99569 1192 aa17.16■□□□□ 0.34
VCP-202ENST00000417448 RBBP8Q99708 897 aa17.16■□□□□ 0.34
VCP-202ENST00000417448 CPNE1Q99829 537 aa17.16■□□□□ 0.34
VCP-202ENST00000417448 FAM129AQ9BZQ8 928 aa17.16■□□□□ 0.34
VCP-202ENST00000417448 SLC7A5P2Q9GIP4 190 aa17.16■□□□□ 0.34
VCP-202ENST00000417448 SYTL2Q9HCH5 934 aa17.16■□□□□ 0.34
VCP-202ENST00000417448 ATP13A2Q9NQ11 1180 aa17.16■□□□□ 0.34
VCP-202ENST00000417448 C1GALT1Q9NS00 363 aa17.16■□□□□ 0.34
VCP-202ENST00000417448 ACTR10Q9NZ32 417 aa17.16■□□□□ 0.34
VCP-202ENST00000417448 TXNDC16Q9P2K2 825 aa17.16■□□□□ 0.34
VCP-202ENST00000417448 NCOA6Q14686 2063 aaPredicted RBP17.16■□□□□ 0.34
VCP-202ENST00000417448 ISM1B1AKI9 464 aa17.15■□□□□ 0.34
VCP-202ENST00000417448 E7EQ34 232 aa17.15■□□□□ 0.34
VCP-202ENST00000417448 PHGDHO43175 533 aaKnown RBP17.15■□□□□ 0.34
VCP-202ENST00000417448 PRICKLE3O43900 615 aaPredicted RBP17.15■□□□□ 0.34
VCP-202ENST00000417448 PSIP1O75475 530 aaKnown RBP17.15■□□□□ 0.34
VCP-202ENST00000417448 TSPAN12O95859 305 aa17.15■□□□□ 0.34
VCP-202ENST00000417448 MPC1LP0DKB6 136 aa17.15■□□□□ 0.34
VCP-202ENST00000417448 PRDX3P30048 256 aaKnown RBP17.15■□□□□ 0.34
VCP-202ENST00000417448 ATP5DP30049 168 aa17.15■□□□□ 0.34
VCP-202ENST00000417448 GP5P40197 560 aa17.15■□□□□ 0.34
VCP-202ENST00000417448 PRKAA1Q13131 559 aa17.15■□□□□ 0.34
VCP-202ENST00000417448 SLC9A5Q14940 896 aa17.15■□□□□ 0.34
VCP-202ENST00000417448 C1orf189Q5VU69 101 aa17.15■□□□□ 0.34
VCP-202ENST00000417448 B3GNTL1Q67FW5 361 aaPredicted RBP17.15■□□□□ 0.34
VCP-202ENST00000417448 UGT3A1Q6NUS8 523 aa17.15■□□□□ 0.34
VCP-202ENST00000417448 MBOAT1Q6ZNC8 495 aa17.15■□□□□ 0.34
VCP-202ENST00000417448 UBE2R2Q712K3 238 aaPredicted RBP17.15■□□□□ 0.34
VCP-202ENST00000417448 CYS1Q717R9 158 aa17.15■□□□□ 0.34
VCP-202ENST00000417448 MRGPRGQ86SM5 289 aa17.15■□□□□ 0.34
VCP-202ENST00000417448 PPFIBP2Q8ND30 876 aa17.15■□□□□ 0.34
VCP-202ENST00000417448 ASB11Q8WXH4 323 aa17.15■□□□□ 0.34
VCP-202ENST00000417448 OR2A14Q96R47 310 aa17.15■□□□□ 0.34
VCP-202ENST00000417448 CHST11Q9NPF2 352 aa17.15■□□□□ 0.34
VCP-202ENST00000417448 ABCF3Q9NUQ8 709 aa17.15■□□□□ 0.34
VCP-202ENST00000417448 OLAHQ9NV23 265 aa17.15■□□□□ 0.34
VCP-202ENST00000417448 NSMCE4AQ9NXX6 385 aa17.15■□□□□ 0.34
VCP-202ENST00000417448 KLHL42Q9P2K6 505 aa17.15■□□□□ 0.34
VCP-202ENST00000417448 H3BMH7 237 aa17.14■□□□□ 0.33
VCP-202ENST00000417448 AGPSO00116 658 aa17.14■□□□□ 0.33
VCP-202ENST00000417448 UGT2B7P16662 529 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms