RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 MENTQ9BUN1 341 aa8.13□□□□□ -1.11
NIF3L1-206ENST00000416651 DEFB127Q9H1M4 99 aa8.13□□□□□ -1.11
NIF3L1-206ENST00000416651 SLC25A51Q9H1U9 297 aa8.13□□□□□ -1.11
NIF3L1-206ENST00000416651 GLOD4Q9HC38 313 aa8.13□□□□□ -1.11
NIF3L1-206ENST00000416651 PNPLA3Q9NST1 481 aa8.13□□□□□ -1.11
NIF3L1-206ENST00000416651 RIC8BQ9NVN3 520 aa8.13□□□□□ -1.11
NIF3L1-206ENST00000416651 TRPC4Q9UBN4 977 aa8.13□□□□□ -1.11
NIF3L1-206ENST00000416651 FAM215AQ9Y5M1 114 aa8.13□□□□□ -1.11
NIF3L1-206ENST00000416651 ARID1AO14497 2285 aa8.13□□□□□ -1.11
NIF3L1-206ENST00000416651 KIAA1549Q9HCM3 1950 aa8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 A0A0U1RQJ8 604 aa8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 KDM4EB2RXH2 506 aaPredicted RBP8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 IFRD1O00458 451 aaPredicted RBP8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 DDX3XO00571 662 aaKnown RBP eCLIP8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 KCNAB3O43448 404 aa8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 CRLF1O75462 422 aa8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 SRP72O76094 671 aaKnown RBP8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 STATHP02808 62 aa8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 ATP1A3P13637 1013 aa8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 ATP1B2P14415 290 aaPredicted RBP8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 TFEBP19484 476 aa8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 EPHA1P21709 976 aa8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 CXCR2P25025 360 aa8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 PKLRP30613 574 aa8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 SHMT2P34897 504 aa8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 CSE1LP55060 971 aaKnown RBP8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 DCAF7P61962 342 aa8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 PPP2R2BQ00005 443 aa8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 OC90Q02509 493 aaPredicted RBP8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 AP1B1Q10567 949 aa8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 BTBD16Q32M84 506 aa8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 Q5PR19 223 aa8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 ZNF571Q7Z3V5 609 aaPredicted RBP8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 GLT6D1Q7Z4J2 308 aa8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 CLYBLQ8N0X4 340 aa8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 PLD5Q8N7P1 536 aa8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 TTC29Q8NA56 475 aaPredicted RBP8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 OR4K2Q8NGD2 314 aa8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 OR10Q1Q8NGQ4 319 aa8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 DTX3LQ8TDB6 740 aa8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 KIAA1191Q96A73 305 aa8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 UTP23Q9BRU9 249 aaKnown RBP8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 KCNK13Q9HB14 408 aa8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 ADGRE2Q9UHX3 823 aa8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 ASF1AQ9Y294 204 aa8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 LIPGQ9Y5X9 500 aa8.12□□□□□ -1.11
NIF3L1-206ENST00000416651 PINLYPA6NC86 204 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 NPIPA2E9PIF3 369 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 NPIPA3F8WFD2 350 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 FOXS1O43638 330 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 NME2P1O60361 137 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 AGTP01019 485 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 GLI4P10075 376 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 DESP17661 470 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 NME2P22392 152 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 PTPN3P26045 913 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 SSR1P43307 286 aaKnown RBP8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 CD151P48509 253 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 GPR85P60893 370 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 ITGA9Q13797 1035 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 PCBP2Q15366 365 aaKnown RBP eCLIP8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 HKDC1Q2TB90 917 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 CCSMST1Q4G0I0 132 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 GXYLT1Q4G148 440 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 TMEM211Q6ICI0 200 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 FBXO42Q6P3S6 717 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 UNC5DQ6UXZ4 953 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 VRK3Q8IV63 474 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 TRIM42Q8IWZ5 723 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 LGI4Q8N135 537 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 RELL2Q8NC24 303 aaPredicted RBP8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 LINC01560Q8TB33 94 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 RAPGEF5Q92565 580 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 VPS50Q96JG6 964 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 ZNF354BQ96LW1 612 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 APOL2Q9BQE5 337 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 CNPPD1Q9BV87 410 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 XPO4Q9C0E2 1151 aaKnown RBP8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 THAP2Q9H0W7 228 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 CDCP1Q9H5V8 836 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 C7orf69Q9H7B7 122 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 HEY1Q9Y5J3 304 aa8.11□□□□□ -1.11
NIF3L1-206ENST00000416651 A0A0A6YYC8 382 aaPredicted RBP8.1□□□□□ -1.11
NIF3L1-206ENST00000416651 HMX2A2RU54 273 aa8.1□□□□□ -1.11
NIF3L1-206ENST00000416651 AGAP14A8MT82 685 aa8.1□□□□□ -1.11
NIF3L1-206ENST00000416651 I3L1I5 382 aaPredicted RBP8.1□□□□□ -1.11
NIF3L1-206ENST00000416651 STX7O15400 261 aaKnown RBP8.1□□□□□ -1.11
NIF3L1-206ENST00000416651 SLC25A12O75746 678 aa8.1□□□□□ -1.11
NIF3L1-206ENST00000416651 SKILP12757 684 aa8.1□□□□□ -1.11
NIF3L1-206ENST00000416651 TACR1P25103 407 aa8.1□□□□□ -1.11
NIF3L1-206ENST00000416651 UQCRC1P31930 480 aa8.1□□□□□ -1.11
NIF3L1-206ENST00000416651 ZFP36L2P47974 494 aaKnown RBP8.1□□□□□ -1.11
NIF3L1-206ENST00000416651 WNT3P56703 355 aa8.1□□□□□ -1.11
NIF3L1-206ENST00000416651 MSLNQ13421 630 aaPredicted RBP8.1□□□□□ -1.11
NIF3L1-206ENST00000416651 MESDQ14696 234 aa8.1□□□□□ -1.11
NIF3L1-206ENST00000416651 KIR2DS3Q14952 304 aa8.1□□□□□ -1.11
NIF3L1-206ENST00000416651 SLC1A5Q15758 541 aa8.1□□□□□ -1.11
NIF3L1-206ENST00000416651 PRSS41Q7RTY9 318 aa8.1□□□□□ -1.11
NIF3L1-206ENST00000416651 CPEB2Q7Z5Q1 589 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms