RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 VN1R1Q9GZP7 353 aa14.56□□□□□ -0.08
DDX56-202ENST00000415758 ENKD1Q9H0I2 346 aa14.56□□□□□ -0.08
DDX56-202ENST00000415758 GPAMQ9HCL2 828 aa14.56□□□□□ -0.08
DDX56-202ENST00000415758 SOWAHDA6NJG2 315 aa14.55□□□□□ -0.08
DDX56-202ENST00000415758 A8MUI8 341 aa14.55□□□□□ -0.08
DDX56-202ENST00000415758 ARHGEF33A8MVX0 844 aa14.55□□□□□ -0.08
DDX56-202ENST00000415758 LIASO43766 372 aa14.55□□□□□ -0.08
DDX56-202ENST00000415758 SEC24DO94855 1032 aaPredicted RBP14.55□□□□□ -0.08
DDX56-202ENST00000415758 CCNDBP1O95273 360 aa14.55□□□□□ -0.08
DDX56-202ENST00000415758 IPO7O95373 1038 aaKnown RBP14.55□□□□□ -0.08
DDX56-202ENST00000415758 ADARP55265 1226 aaKnown RBP14.55□□□□□ -0.08
DDX56-202ENST00000415758 EIF3BP55884 814 aaKnown RBP14.55□□□□□ -0.08
DDX56-202ENST00000415758 KRTAP10-9P60411 292 aa14.55□□□□□ -0.08
DDX56-202ENST00000415758 ABATP80404 500 aa14.55□□□□□ -0.08
DDX56-202ENST00000415758 MAT1AQ00266 395 aaKnown RBP14.55□□□□□ -0.08
DDX56-202ENST00000415758 NDUFA9Q16795 377 aa14.55□□□□□ -0.08
DDX56-202ENST00000415758 PCGF5Q86SE9 256 aa14.55□□□□□ -0.08
DDX56-202ENST00000415758 BEST3Q8N1M1 668 aa14.55□□□□□ -0.08
DDX56-202ENST00000415758 ATG4AQ8WYN0 398 aa14.55□□□□□ -0.08
DDX56-202ENST00000415758 MAGED4Q96JG8 741 aa14.55□□□□□ -0.08
DDX56-202ENST00000415758 SIGLEC12Q96PQ1 595 aa14.55□□□□□ -0.08
DDX56-202ENST00000415758 PANX2Q96RD6 677 aa14.55□□□□□ -0.08
DDX56-202ENST00000415758 RAB6BQ9NRW1 208 aa14.55□□□□□ -0.08
DDX56-202ENST00000415758 FAM114A2Q9NRY5 505 aa14.55□□□□□ -0.08
DDX56-202ENST00000415758 C19orf25Q9UFG5 118 aaPredicted RBP14.55□□□□□ -0.08
DDX56-202ENST00000415758 PACSIN2Q9UNF0 486 aaPredicted RBP14.55□□□□□ -0.08
DDX56-202ENST00000415758 NF1P21359 2839 aa14.55□□□□□ -0.08
DDX56-202ENST00000415758 ZNF839A8K0R7 811 aa14.54□□□□□ -0.08
DDX56-202ENST00000415758 H3BMM5 538 aa14.54□□□□□ -0.08
DDX56-202ENST00000415758 CDK2AP1O14519 115 aa14.54□□□□□ -0.08
DDX56-202ENST00000415758 P2RX6O15547 441 aa14.54□□□□□ -0.08
DDX56-202ENST00000415758 NSA2O95478 260 aaKnown RBP14.54□□□□□ -0.08
DDX56-202ENST00000415758 IFNB1P01574 187 aa14.54□□□□□ -0.08
DDX56-202ENST00000415758 APRTP07741 180 aa14.54□□□□□ -0.08
DDX56-202ENST00000415758 ARNTP27540 789 aa14.54□□□□□ -0.08
DDX56-202ENST00000415758 CD96P40200 585 aa14.54□□□□□ -0.08
DDX56-202ENST00000415758 AVPR1BP47901 424 aa14.54□□□□□ -0.08
DDX56-202ENST00000415758 PNLIPRP1P54315 467 aa14.54□□□□□ -0.08
DDX56-202ENST00000415758 ALDH6A1Q02252 535 aaKnown RBP14.54□□□□□ -0.08
DDX56-202ENST00000415758 TUBA3CQ13748 450 aa14.54□□□□□ -0.08
DDX56-202ENST00000415758 MEP1AQ16819 746 aa14.54□□□□□ -0.08
DDX56-202ENST00000415758 BTBD16Q32M84 506 aa14.54□□□□□ -0.08
DDX56-202ENST00000415758 TUBA3EQ6PEY2 450 aa14.54□□□□□ -0.08
DDX56-202ENST00000415758 SYCE1Q8N0S2 351 aa14.54□□□□□ -0.08
DDX56-202ENST00000415758 FBXO15Q8NCQ5 510 aaPredicted RBP14.54□□□□□ -0.08
DDX56-202ENST00000415758 PHF10Q8WUB8 498 aaKnown RBP14.54□□□□□ -0.08
DDX56-202ENST00000415758 LPGAT1Q92604 370 aa14.54□□□□□ -0.08
DDX56-202ENST00000415758 HES6Q96HZ4 224 aa14.54□□□□□ -0.08
DDX56-202ENST00000415758 TCF12Q99081 682 aa14.54□□□□□ -0.08
DDX56-202ENST00000415758 TREX2Q9BQ50 279 aaPredicted RBP14.54□□□□□ -0.08
DDX56-202ENST00000415758 TAC3Q9UHF0 121 aa14.54□□□□□ -0.08
DDX56-202ENST00000415758 PCYOX1Q9UHG3 505 aa14.54□□□□□ -0.08
DDX56-202ENST00000415758 KCNE1BA0A087WTH5 132 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 IGHV3-20A0A0C4DH32 117 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 E7ENX8 843 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 ASNA1O43681 348 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 NIPSNAP2O75323 286 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 SLC16A8O95907 504 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 ESR1P03372 595 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 PTMSP20962 102 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 NMBRP28336 390 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 EEF1DP29692 281 aaKnown RBP14.53□□□□□ -0.08
DDX56-202ENST00000415758 NPY2RP49146 381 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 AGTR2P50052 363 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 SNRPNP63162 240 aaKnown RBP14.53□□□□□ -0.08
DDX56-202ENST00000415758 TAP2Q03519 686 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 PTK6Q13882 451 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 OR1C1Q15619 314 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 EXT1Q16394 746 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 TYSND1Q2T9J0 566 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 KLHL38Q2WGJ6 581 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 RNF187Q5TA31 235 aaPredicted RBP14.53□□□□□ -0.08
DDX56-202ENST00000415758 MRNIPQ6NTE8 343 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 LANCL3Q6ZV70 420 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 SDCCAG8Q86SQ7 713 aaPredicted RBP14.53□□□□□ -0.08
DDX56-202ENST00000415758 SIAH3Q8IW03 269 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 CEP97Q8IW35 865 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 TMEM178AQ8NBL3 297 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 RNF214Q8ND24 703 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 OR9A4Q8NGU2 314 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 M1APQ8TC57 530 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 ZNF480Q8WV37 535 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 FRMD6Q96NE9 622 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 PKP4Q99569 1192 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 NPAS2Q99743 824 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 EBNA1BP2Q99848 306 aaKnown RBP14.53□□□□□ -0.08
DDX56-202ENST00000415758 UTP23Q9BRU9 249 aaKnown RBP14.53□□□□□ -0.08
DDX56-202ENST00000415758 IL22Q9GZX6 179 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 TSPY26PQ9H489 355 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 MCCC2Q9HCC0 563 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 MMP25Q9NPA2 562 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 EIF2B3Q9NR50 452 aaKnown RBP14.53□□□□□ -0.08
DDX56-202ENST00000415758 PAK5Q9P286 719 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 ZNF148Q9UQR1 794 aa14.53□□□□□ -0.08
DDX56-202ENST00000415758 NPIPA5E9PKD4 350 aa14.52□□□□□ -0.09
DDX56-202ENST00000415758 FAM227AF5H4B4 570 aa14.52□□□□□ -0.09
DDX56-202ENST00000415758 AP3B1O00203 1094 aa14.52□□□□□ -0.09
DDX56-202ENST00000415758 HAT1O14929 419 aa14.52□□□□□ -0.09
DDX56-202ENST00000415758 CATP04040 527 aaKnown RBP14.52□□□□□ -0.09
DDX56-202ENST00000415758 ETS1P14921 441 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms