RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 PKP1Q13835 747 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 KIR2DS3Q14952 304 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 POU4F3Q15319 338 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 IFI16Q16666 785 aaKnown RBP5.96□□□□□ -1.46
LINC00396-201ENST00000411690 MUM1Q2TAK8 710 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 CHRFAM7AQ494W8 412 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 BCL7AQ4VC05 210 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 C10orf62Q5T681 223 aaPredicted RBP5.96□□□□□ -1.46
LINC00396-201ENST00000411690 LCE5AQ5TCM9 118 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 PLAG1Q6DJT9 500 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 KIAA0930Q6ICG6 404 aaPredicted RBP5.96□□□□□ -1.46
LINC00396-201ENST00000411690 SLC13A5Q86YT5 568 aaPredicted RBP5.96□□□□□ -1.46
LINC00396-201ENST00000411690 LGI4Q8N135 537 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 SLC5A8Q8N695 610 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 OR52N2Q8NGI0 321 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 OR5M9Q8NGP3 310 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 C16orf52Q8NHV5 167 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 LINC01560Q8TB33 94 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 ZNF398Q8TD17 642 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 METTL21AQ8WXB1 218 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 HSPH1Q92598 858 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 RNASE6Q93091 150 aaKnown RBP5.96□□□□□ -1.46
LINC00396-201ENST00000411690 FATE1Q969F0 183 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 PERPQ96FX8 193 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 ZNF285Q96NJ3 590 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 TSGA13Q96PP4 275 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 NPAS2Q99743 824 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 PLA2G12AQ9BZM1 189 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 AMBRA1Q9C0C7 1298 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 ATG10Q9H0Y0 220 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 NDST4Q9H3R1 872 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 COG4Q9H9E3 785 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 PNPLA3Q9NST1 481 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.96□□□□□ -1.46
LINC00396-201ENST00000411690 SMOXQ9NWM0 555 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.96□□□□□ -1.46
LINC00396-201ENST00000411690 STOX2Q9P2F5 926 aaPredicted RBP5.96□□□□□ -1.46
LINC00396-201ENST00000411690 B4GALT7Q9UBV7 327 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 ZC3H7BQ9UGR2 993 aaKnown RBP5.96□□□□□ -1.46
LINC00396-201ENST00000411690 CDC14AQ9UNH5 594 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 TDRKHQ9Y2W6 561 aaKnown RBP5.96□□□□□ -1.46
LINC00396-201ENST00000411690 SPO11Q9Y5K1 396 aa5.96□□□□□ -1.46
LINC00396-201ENST00000411690 A0A1W2PPR1 153 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 DBX1A6NMT0 343 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 FAM47E-STBD1D6RA91 191 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 BIN1O00499 593 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 PRPF4O43172 522 aaKnown RBP eCLIP5.95□□□□□ -1.46
LINC00396-201ENST00000411690 SGTAO43765 313 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 MFSD11O43934 449 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 SMNDC1O75940 238 aaKnown RBP eCLIP5.95□□□□□ -1.46
LINC00396-201ENST00000411690 NDST3O95803 873 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 HRGP04196 525 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 TP53P04637 393 aaPredicted RBP5.95□□□□□ -1.46
LINC00396-201ENST00000411690 EIF2S1P05198 315 aaKnown RBP5.95□□□□□ -1.46
LINC00396-201ENST00000411690 RALBP11234 206 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 IL1R2P27930 398 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 PEBP1P30086 187 aaKnown RBP5.95□□□□□ -1.46
LINC00396-201ENST00000411690 SOX5P35711 763 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 CYB561P49447 251 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 PRLHRP49683 370 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 ASCL1P50553 236 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 MAMLD1Q13495 774 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 MAN2A1Q16706 1144 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 BOLA3Q53S33 107 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 FIGNQ5HY92 759 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 RTL6Q6ICC9 239 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 BHLHB9Q6PI77 547 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 FIGLAQ6QHK4 219 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 CPEB2Q7Z5Q1 589 aaKnown RBP5.95□□□□□ -1.46
LINC00396-201ENST00000411690 KIF18BQ86Y91 864 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 SULF2Q8IWU5 870 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 MCOLN2Q8IZK6 566 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 OR5AR1Q8NGP9 310 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 SLCO2A1Q92959 643 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 DCUN1D1Q96GG9 259 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 SH3GL2Q99962 352 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 PLCD4Q9BRC7 762 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 TGIF2Q9GZN2 237 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 DEFB127Q9H1M4 99 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 TRABDQ9H4I3 376 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 CDCP1Q9H5V8 836 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 MKKSQ9NPJ1 570 aaPredicted RBP5.95□□□□□ -1.46
LINC00396-201ENST00000411690 PARVAQ9NVD7 372 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 INTS7Q9NVH2 962 aaKnown RBP5.95□□□□□ -1.46
LINC00396-201ENST00000411690 POLG2Q9UHN1 485 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 FOXD3Q9UJU5 478 aaPredicted RBP5.95□□□□□ -1.46
LINC00396-201ENST00000411690 ASF1AQ9Y294 204 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 KLF13Q9Y2Y9 288 aaPredicted RBP5.95□□□□□ -1.46
LINC00396-201ENST00000411690 PKP3Q9Y446 797 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 FAM215AQ9Y5M1 114 aa5.95□□□□□ -1.46
LINC00396-201ENST00000411690 HRNRQ86YZ3 2850 aaPredicted RBP5.95□□□□□ -1.46
LINC00396-201ENST00000411690 TLN2Q9Y4G6 2542 aa5.94□□□□□ -1.46
LINC00396-201ENST00000411690 TMEM191CA6NGB0 347 aa5.94□□□□□ -1.46
LINC00396-201ENST00000411690 KCNK1O00180 336 aa5.94□□□□□ -1.46
LINC00396-201ENST00000411690 PES1O00541 588 aaKnown RBP5.94□□□□□ -1.46
LINC00396-201ENST00000411690 GAPDHSO14556 408 aaPredicted RBP5.94□□□□□ -1.46
LINC00396-201ENST00000411690 BCKDKO14874 412 aa5.94□□□□□ -1.46
LINC00396-201ENST00000411690 BUD23O43709 281 aaKnown RBP5.94□□□□□ -1.46
LINC00396-201ENST00000411690 TLX2O43763 284 aaPredicted RBP5.94□□□□□ -1.46
LINC00396-201ENST00000411690 PEX1O43933 1283 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms