RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 CXCR6O00574 342 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 NDUFS3O75489 264 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 EPOP01588 193 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 APOA1P02647 267 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 ODC1P11926 461 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 BMP1P13497 986 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 APEHP13798 732 aaKnown RBP15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 HOXB6P17509 224 aaKnown RBP15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 KRR1Q13601 381 aaKnown RBP15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 TIGD5Q53EQ6 642 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 SYT6Q5T7P8 510 aaPredicted RBP15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 GPRC5AQ8NFJ5 357 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 UFD1Q92890 307 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 ESAMQ96AP7 390 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 ZNF300Q96RE9 604 aaPredicted RBP15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 GAD1Q99259 594 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 DSN1Q9H410 356 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 MAGIXQ9H6Y5 334 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 ANKHQ9HCJ1 492 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 TMEM248Q9NWD8 314 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 EIF2B4Q9UI10 523 aaKnown RBP15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 LTBP3Q9NS15 1303 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 HNRNPCL2B2RXH8 293 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 PRMT5O14744 637 aaPredicted RBP15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 PRMT3O60678 531 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 ITGAMP11215 1152 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 JUNDP17535 347 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 ALDH4A1P30038 563 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 GPC1P35052 558 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 PBX3P40426 434 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 ERVPABLB-1P60509 514 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 BAMBIQ13145 260 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 NR6A1Q15406 480 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 PAGE2Q7Z2X7 111 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 HDDC2Q7Z4H3 204 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 DCBLD1Q8N8Z6 715 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 OR4D10Q8NGI6 311 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 REXO4Q9GZR2 422 aaKnown RBP15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 POLR1EQ9GZS1 481 aaKnown RBP15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 UTS2RQ9UKP6 389 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 MEIS3P2A8K0S8 358 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 ANKRD28O15084 1053 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 PRSS56P0CW18 603 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 AKT1P31749 480 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 MAP2K4P45985 399 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 PGFP49763 221 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 SNRPD2P62316 118 aaKnown RBP15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 PPP1R8Q12972 351 aaKnown RBP15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 RAPSNQ13702 412 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 AP5B1Q2VPB7 878 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 LRRC8DQ7L1W4 858 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 PRSS48Q7RTY5 328 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 TMEM179BQ7Z7N9 219 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 SCD5Q86SK9 330 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 RASGRP3Q8IV61 690 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 SLC22A15Q8IZD6 547 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 ABI1Q8IZP0 508 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 SLC13A3Q8WWT9 602 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 POP5Q969H6 163 aaKnown RBP15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 RHBDF1Q96CC6 855 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 CDK15Q96Q40 435 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 PHOX2BQ99453 314 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 PRRG3Q9BZD7 231 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 DUSP21Q9H596 190 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 PRDM5Q9NQX1 630 aaPredicted RBP15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 TMEFF2Q9UIK5 374 aaPredicted RBP15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 LAMP5Q9UJQ1 280 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 NEUROG3Q9Y4Z2 214 aa15.72■□□□□ 0.11
COL4A3BP-204ENST00000405807 AKR7A2O43488 359 aa15.71■□□□□ 0.11
COL4A3BP-204ENST00000405807 SSX4O60224 188 aa15.71■□□□□ 0.11
COL4A3BP-204ENST00000405807 VPS26AO75436 327 aa15.71■□□□□ 0.11
COL4A3BP-204ENST00000405807 F2P00734 622 aa15.71■□□□□ 0.11
COL4A3BP-204ENST00000405807 FTH1P02794 183 aa15.71■□□□□ 0.11
COL4A3BP-204ENST00000405807 FABP1P07148 127 aa15.71■□□□□ 0.11
COL4A3BP-204ENST00000405807 HEXBP07686 556 aa15.71■□□□□ 0.11
COL4A3BP-204ENST00000405807 PIRTP0C851 137 aa15.71■□□□□ 0.11
COL4A3BP-204ENST00000405807 TNNI3P19429 210 aa15.71■□□□□ 0.11
COL4A3BP-204ENST00000405807 FSHRP23945 695 aa15.71■□□□□ 0.11
COL4A3BP-204ENST00000405807 PSMB9P28065 219 aa15.71■□□□□ 0.11
COL4A3BP-204ENST00000405807 GTF2E2P29084 291 aaKnown RBP15.71■□□□□ 0.11
COL4A3BP-204ENST00000405807 HUNKP57058 714 aa15.71■□□□□ 0.11
COL4A3BP-204ENST00000405807 PARP15Q460N3 678 aa15.71■□□□□ 0.11
COL4A3BP-204ENST00000405807 KIAA1614Q5VZ46 1190 aa15.71■□□□□ 0.11
COL4A3BP-204ENST00000405807 CREB3L2Q70SY1 520 aa15.71■□□□□ 0.11
COL4A3BP-204ENST00000405807 SVOPQ8N4V2 548 aa15.71■□□□□ 0.11
COL4A3BP-204ENST00000405807 C2orf69Q8N8R5 385 aa15.71■□□□□ 0.11
COL4A3BP-204ENST00000405807 OR52B6Q8NGF0 335 aa15.71■□□□□ 0.11
COL4A3BP-204ENST00000405807 ALOXE3Q9BYJ1 711 aa15.71■□□□□ 0.11
COL4A3BP-204ENST00000405807 UCK1Q9HA47 277 aa15.71■□□□□ 0.11
COL4A3BP-204ENST00000405807 DCAF13Q9NV06 445 aaKnown RBP15.71■□□□□ 0.11
COL4A3BP-204ENST00000405807 POLR3HQ9Y535 204 aaPredicted RBP15.71■□□□□ 0.11
COL4A3BP-204ENST00000405807 SLC22A7Q9Y694 548 aa15.71■□□□□ 0.11
COL4A3BP-204ENST00000405807 HSPE1-MOB4S4R3N1 261 aa15.71■□□□□ 0.11
COL4A3BP-204ENST00000405807 H0Y626 953 aa15.71■□□□□ 0.1
COL4A3BP-204ENST00000405807 TREHO43280 583 aa15.71■□□□□ 0.1
COL4A3BP-204ENST00000405807 MEOX2P50222 304 aa15.71■□□□□ 0.1
COL4A3BP-204ENST00000405807 CXCR4P61073 352 aa15.71■□□□□ 0.1
COL4A3BP-204ENST00000405807 SLC35A2P78381 396 aa15.71■□□□□ 0.1
COL4A3BP-204ENST00000405807 FPGSQ05932 587 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms