RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 TMEM247A6NEH6 219 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 PITPNM1O00562 1244 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 PRRG1O14668 218 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 ADAM23O75077 832 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 CPSF4O95639 269 aaKnown RBP10.39□□□□□ -0.75
CLIP4-204ENST00000404424 ABCB1P08183 1280 aaPredicted RBP10.39□□□□□ -0.75
CLIP4-204ENST00000404424 BMP4P12644 408 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 SRCP12931 536 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 ITPKAP23677 461 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 UGT2B10P36537 528 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 ASMTP46597 345 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 SPINT3P49223 89 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 LSM3P62310 102 aaKnown RBP10.39□□□□□ -0.75
CLIP4-204ENST00000404424 CAP1Q01518 475 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 ACSM2AQ08AH3 577 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 LRRC74AQ0VAA2 488 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 IQCCQ4KMZ1 466 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 PERM1Q5SV97 790 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 ANXA8L1Q5VT79 327 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 MLIPQ5VWP3 458 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 ACSM2BQ68CK6 577 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 TXNDC8Q6A555 127 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 HTR3DQ70Z44 454 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 PLD3Q8IV08 490 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 VRK3Q8IV63 474 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 P3H2Q8IVL5 708 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 SLC38A4Q969I6 547 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 VOPP1Q96AW1 172 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 C7orf34Q96L11 122 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 DUSP26Q9BV47 211 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 ITPAQ9BY32 194 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 SLIRPQ9GZT3 109 aaKnown RBP10.39□□□□□ -0.75
CLIP4-204ENST00000404424 PLCXD1Q9NUJ7 323 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 AASSQ9UDR5 926 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 OSGIN1Q9UJX0 560 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 PMF1-BGLAPU3KQ54 211 aa10.39□□□□□ -0.75
CLIP4-204ENST00000404424 PLXNB3Q9ULL4 1909 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 SUV39H1O43463 412 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 PCDHGA12O60330 932 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 WBP4O75554 376 aaKnown RBP10.38□□□□□ -0.75
CLIP4-204ENST00000404424 CD36P16671 472 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 LHCGRP22888 699 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 CD40LGP29965 261 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 HNF4AP41235 474 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 PXNP49023 591 aaPredicted RBP10.38□□□□□ -0.75
CLIP4-204ENST00000404424 PPP5CP53041 499 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 NCS1P62166 190 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 ELP6Q0PNE2 266 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 RAB33AQ14088 237 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 TEAD4Q15561 434 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 SMN1Q16637 294 aaKnown RBP10.38□□□□□ -0.75
CLIP4-204ENST00000404424 TCTN1Q2MV58 587 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 AGAP7PQ5VUJ5 663 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 PDE12Q6L8Q7 609 aaKnown RBP10.38□□□□□ -0.75
CLIP4-204ENST00000404424 CAMKMTQ7Z624 323 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 CCDC71Q8IV32 467 aaPredicted RBP10.38□□□□□ -0.75
CLIP4-204ENST00000404424 RASGRP3Q8IV61 690 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 ENTHD1Q8IYW4 607 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 C11orf24Q96F05 449 aaPredicted RBP10.38□□□□□ -0.75
CLIP4-204ENST00000404424 EMILIN2Q9BXX0 1053 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 BRF2Q9HAW0 419 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 FZD4Q9ULV1 537 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 WDR37Q9Y2I8 494 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 TTC34A8MYJ7 566 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 EFCAB9A8MZ26 197 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 H0YIV9 168 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 SCAMP2O15127 329 aaKnown RBP10.38□□□□□ -0.75
CLIP4-204ENST00000404424 AP2A2O94973 939 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 C1SP09871 688 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 PTX3P26022 381 aaPredicted RBP10.38□□□□□ -0.75
CLIP4-204ENST00000404424 EPHA2P29317 976 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 CD70P32970 193 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 KCNJ10P78508 379 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 IFITM3Q01628 133 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 PCDH1Q08174 1060 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 XKR6Q5GH73 641 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 LHX8Q68G74 356 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 PLEKHG7Q6ZR37 379 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 TCEAL8Q8IYN2 117 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 CLECL1Q8IZS7 167 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 KIAA1958Q8N8K9 716 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 RHOXF1Q8NHV9 184 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 APH1BQ8WW43 257 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 ASZ1Q8WWH4 475 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 ATL1Q8WXF7 558 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 CLP1Q92989 425 aaKnown RBP10.38□□□□□ -0.75
CLIP4-204ENST00000404424 ZHX1-C8orf76Q96EF9 292 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 ZIC5Q96T25 663 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 DPH2Q9BQC3 489 aaPredicted RBP10.38□□□□□ -0.75
CLIP4-204ENST00000404424 BTBD2Q9BX70 525 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 ATG10Q9H0Y0 220 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 ABCG8Q9H221 673 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 CHST8Q9H2A9 424 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 ZNF334Q9HCZ1 680 aaPredicted RBP10.38□□□□□ -0.75
CLIP4-204ENST00000404424 RASSF1Q9NS23 344 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 SRRDQ9UH36 339 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 ITGB1BP2Q9UKP3 347 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 CLEC4EQ9ULY5 219 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 ERVK-11Q9UQG0 969 aa10.38□□□□□ -0.75
CLIP4-204ENST00000404424 HS3ST2Q9Y278 367 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms