RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 L3MBTL4Q8NA19 623 aa31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 AGAP11Q8TF27 550 aa31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 PILRAQ9UKJ1 303 aa31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 KNTC1P50748 2209 aa31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 SPTBN4Q9H254 2564 aa31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 A0A0J9YVX5 310 aa31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 LCMT2O60294 686 aaKnown RBP31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 UGDHO60701 494 aa31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 LYPLA1O75608 230 aaPredicted RBP31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 OR4F21O95013 312 aa31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 EZRP15311 586 aaKnown RBP31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 SERPINB5P36952 375 aa31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 REEP5Q00765 189 aa31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 CYP4F3Q08477 520 aa31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 BST1Q10588 318 aa31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 TRIM42Q8IWZ5 723 aa31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 DNAJC22Q8N4W6 341 aa31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 ZNF75CPQ92670 426 aaPredicted RBP31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 STRADBQ9C0K7 418 aa31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 CHRNA10Q9GZZ6 450 aa31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 SYNPO2LQ9H987 977 aa31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 STK38LQ9Y2H1 464 aa31.9■■■□□ 2.7
CSNK1E-204ENST00000403904 PTPRBP23467 1997 aa31.89■■■□□ 2.7
CSNK1E-204ENST00000403904 HGSO14964 777 aaPredicted RBP31.89■■■□□ 2.7
CSNK1E-204ENST00000403904 JUPP14923 745 aa31.89■■■□□ 2.7
CSNK1E-204ENST00000403904 FOLR1P15328 257 aa31.89■■■□□ 2.7
CSNK1E-204ENST00000403904 PKNOX1P55347 436 aa31.89■■■□□ 2.7
CSNK1E-204ENST00000403904 ABCE1P61221 599 aaKnown RBP31.89■■■□□ 2.7
CSNK1E-204ENST00000403904 CPSF6Q16630 551 aaKnown RBP eCLIP31.89■■■□□ 2.7
CSNK1E-204ENST00000403904 PAGE2BQ5JRK9 111 aa31.89■■■□□ 2.7
CSNK1E-204ENST00000403904 GRHL2Q6ISB3 625 aa31.89■■■□□ 2.7
CSNK1E-204ENST00000403904 TMPRSS12Q86WS5 348 aa31.89■■■□□ 2.7
CSNK1E-204ENST00000403904 AGBL5Q8NDL9 886 aa31.89■■■□□ 2.7
CSNK1E-204ENST00000403904 ZFYVE21Q9BQ24 234 aa31.89■■■□□ 2.7
CSNK1E-204ENST00000403904 C20orf27Q9GZN8 174 aa31.89■■■□□ 2.7
CSNK1E-204ENST00000403904 TNFRSF12AQ9NP84 129 aa31.89■■■□□ 2.7
CSNK1E-204ENST00000403904 WDFY3Q8IZQ1 3526 aa31.89■■■□□ 2.7
CSNK1E-204ENST00000403904 FAM149AA5PLN7 773 aa31.88■■■□□ 2.69
CSNK1E-204ENST00000403904 TMEM114B3SHH9 223 aa31.88■■■□□ 2.69
CSNK1E-204ENST00000403904 TMX2-CTNND1H3BSU7 103 aa31.88■■■□□ 2.69
CSNK1E-204ENST00000403904 OR1F1O43749 312 aa31.88■■■□□ 2.69
CSNK1E-204ENST00000403904 ESRRBO95718 433 aa31.88■■■□□ 2.69
CSNK1E-204ENST00000403904 CXCR2P25025 360 aa31.88■■■□□ 2.69
CSNK1E-204ENST00000403904 BCL6P41182 706 aa31.88■■■□□ 2.69
CSNK1E-204ENST00000403904 HNF4AP41235 474 aa31.88■■■□□ 2.69
CSNK1E-204ENST00000403904 SLC1A6P48664 564 aa31.88■■■□□ 2.69
CSNK1E-204ENST00000403904 LAPTM5Q13571 262 aa31.88■■■□□ 2.69
CSNK1E-204ENST00000403904 PUM1Q14671 1186 aaKnown RBP eCLIP31.88■■■□□ 2.69
CSNK1E-204ENST00000403904 RBBP5Q15291 538 aaKnown RBP31.88■■■□□ 2.69
CSNK1E-204ENST00000403904 TMTC4Q5T4D3 741 aa31.88■■■□□ 2.69
CSNK1E-204ENST00000403904 RNF44Q7L0R7 432 aa31.88■■■□□ 2.69
CSNK1E-204ENST00000403904 KRT78Q8N1N4 520 aa31.88■■■□□ 2.69
CSNK1E-204ENST00000403904 RAB3IL1Q8TBN0 382 aa31.88■■■□□ 2.69
CSNK1E-204ENST00000403904 OCIAD1Q9NX40 245 aa31.88■■■□□ 2.69
CSNK1E-204ENST00000403904 ZNF490Q9ULM2 529 aaPredicted RBP31.88■■■□□ 2.69
CSNK1E-204ENST00000403904 TRBC2A0A5B9 178 aa31.87■■■□□ 2.69
CSNK1E-204ENST00000403904 RELAQ04206 551 aa31.87■■■□□ 2.69
CSNK1E-204ENST00000403904 TARDBPQ13148 414 aaKnown RBP eCLIP31.87■■■□□ 2.69
CSNK1E-204ENST00000403904 ATG16L1Q676U5 607 aa31.87■■■□□ 2.69
CSNK1E-204ENST00000403904 FRMPD2BQ6IN97 320 aa31.87■■■□□ 2.69
CSNK1E-204ENST00000403904 TMIGD1Q6UXZ0 262 aa31.87■■■□□ 2.69
CSNK1E-204ENST00000403904 CUZD1Q86UP6 607 aa31.87■■■□□ 2.69
CSNK1E-204ENST00000403904 CDYL2Q8N8U2 506 aa31.87■■■□□ 2.69
CSNK1E-204ENST00000403904 CKAP2Q8WWK9 683 aa31.87■■■□□ 2.69
CSNK1E-204ENST00000403904 EML4Q9HC35 981 aaKnown RBP31.87■■■□□ 2.69
CSNK1E-204ENST00000403904 FAM53CQ9NYF3 392 aa31.87■■■□□ 2.69
CSNK1E-204ENST00000403904 HSPA4LO95757 839 aa31.86■■■□□ 2.69
CSNK1E-204ENST00000403904 GABRA4P48169 554 aa31.86■■■□□ 2.69
CSNK1E-204ENST00000403904 RPS15AP62244 130 aaKnown RBP31.86■■■□□ 2.69
CSNK1E-204ENST00000403904 GALNT1Q10472 559 aaPredicted RBP31.86■■■□□ 2.69
CSNK1E-204ENST00000403904 GPR19Q15760 415 aa31.86■■■□□ 2.69
CSNK1E-204ENST00000403904 HIST2H2ACQ16777 129 aaPredicted RBP31.86■■■□□ 2.69
CSNK1E-204ENST00000403904 ZC3H12BQ5HYM0 836 aaKnown RBP31.86■■■□□ 2.69
CSNK1E-204ENST00000403904 HIST2H2AA3Q6FI13 130 aa31.86■■■□□ 2.69
CSNK1E-204ENST00000403904 MARCH9Q86YJ5 346 aa31.86■■■□□ 2.69
CSNK1E-204ENST00000403904 MCATQ8IVS2 390 aaKnown RBP31.86■■■□□ 2.69
CSNK1E-204ENST00000403904 CHCHD4Q8N4Q1 142 aa31.86■■■□□ 2.69
CSNK1E-204ENST00000403904 ANKRD53Q8N9V6 530 aa31.86■■■□□ 2.69
CSNK1E-204ENST00000403904 GRAMD1AQ96CP6 724 aa31.86■■■□□ 2.69
CSNK1E-204ENST00000403904 OR2A5Q96R48 311 aa31.86■■■□□ 2.69
CSNK1E-204ENST00000403904 KCNA7Q96RP8 456 aa31.86■■■□□ 2.69
CSNK1E-204ENST00000403904 CMKLR1Q99788 373 aa31.86■■■□□ 2.69
CSNK1E-204ENST00000403904 SARGQ9BW04 601 aa31.86■■■□□ 2.69
CSNK1E-204ENST00000403904 TRPS1Q9UHF7 1281 aa31.86■■■□□ 2.69
CSNK1E-204ENST00000403904 KCNE1BA0A087WTH5 132 aa31.85■■■□□ 2.69
CSNK1E-204ENST00000403904 FFAR3O14843 346 aa31.85■■■□□ 2.69
CSNK1E-204ENST00000403904 GPR42O15529 346 aa31.85■■■□□ 2.69
CSNK1E-204ENST00000403904 HGFP14210 728 aa31.85■■■□□ 2.69
CSNK1E-204ENST00000403904 GGTA1PQ4G0N0 100 aa31.85■■■□□ 2.69
CSNK1E-204ENST00000403904 LRRC8CQ8TDW0 803 aa31.85■■■□□ 2.69
CSNK1E-204ENST00000403904 SIDT1Q9NXL6 827 aaKnown RBP31.85■■■□□ 2.69
CSNK1E-204ENST00000403904 PCDHGA4Q9Y5G9 962 aa31.85■■■□□ 2.69
CSNK1E-204ENST00000403904 LOC105369274A0A096LPK9 316 aa31.85■■■□□ 2.69
CSNK1E-204ENST00000403904 LOC102723532A0A0G2JNH3 316 aa31.85■■■□□ 2.69
CSNK1E-204ENST00000403904 EFCAB7A8K855 629 aa31.85■■■□□ 2.69
CSNK1E-204ENST00000403904 CAPN1P07384 714 aa31.85■■■□□ 2.69
CSNK1E-204ENST00000403904 CTSBP07858 339 aa31.85■■■□□ 2.69
CSNK1E-204ENST00000403904 SCTRP47872 440 aa31.85■■■□□ 2.69
CSNK1E-204ENST00000403904 FOXA1P55317 472 aa31.85■■■□□ 2.69
CSNK1E-204ENST00000403904 ZRSR2Q15696 482 aaKnown RBP31.85■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms