RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 CYP4F3Q08477 520 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 TRAF3Q13114 568 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 GTF2H2Q13888 395 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 DOC2AQ14183 400 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 TMTC4Q5T4D3 741 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 CES4AQ5XG92 561 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ATG9BQ674R7 924 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ADNP2Q6IQ32 1131 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 GTF2H2CQ6P1K8 395 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ADCK2Q7Z695 626 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 MCATQ8IVS2 390 aaKnown RBP11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 C10orf107Q8IVU9 208 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ARHGEF39Q8N4T4 335 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ANKRD53Q8N9V6 530 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 OR52B6Q8NGF0 335 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 GATA6Q92908 595 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 USP7Q93009 1102 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 L3HYPDHQ96EM0 354 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 SLC46A1Q96NT5 459 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ZFYVE21Q9BQ24 234 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ERVK-6Q9BXR3 956 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 KRTAP3-3Q9BYR6 98 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 KRTAP3-2Q9BYR7 98 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 SPRY4Q9C004 299 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 SPRTNQ9H040 489 aaPredicted RBP11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 OXSMQ9NWU1 459 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 SLC39A1Q9NY26 324 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ZNF225Q9UK10 706 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 PLCL2Q9UPR0 1127 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 PCDHGA3Q9Y5H0 932 aa11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 TNPO3Q9Y5L0 923 aaKnown RBP11.88□□□□□ -0.51
HLA-DQB1-203ENST00000399082 KCNE1BA0A087WTH5 132 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 GOLGA6L10A6NI86 522 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 H0YGG7 62 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 MED26O95402 600 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 STATHP02808 62 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 EZRP15311 586 aaKnown RBP11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 EPB42P16452 691 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 TSPAN8P19075 237 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 IMPDH1P20839 514 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ALDH3A1P30838 453 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 CCR10P46092 362 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 SCTRP47872 440 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 CCR8P51685 355 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 CDH13P55290 713 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 WDR4P57081 412 aaKnown RBP11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 DNAJB13P59910 316 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ARF3P61204 181 aaPredicted RBP11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 FOXM1Q08050 763 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 SLBPQ14493 270 aaKnown RBP eCLIP11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 IL11RAQ14626 422 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 NAA25Q14CX7 972 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 TBCCQ15814 346 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 PRTGQ2VWP7 1150 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 PWWP2BQ6NUJ5 590 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ATG14Q6ZNE5 492 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 VN1R5Q7Z5H4 357 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 SLC22A9Q8IVM8 553 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 OR6Y1Q8NGX8 325 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 PKNOX2Q96KN3 472 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ATP6V1G3Q96LB4 118 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 TAAR9Q96RI9 348 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 DDA1Q9BW61 102 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 GATA5Q9BWX5 397 aaPredicted RBP11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 AICDAQ9GZX7 198 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 EHD1Q9H4M9 534 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 NOL11Q9H8H0 719 aaKnown RBP11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 IPPKQ9H8X2 491 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 AKAP7Q9P0M2 348 aaPredicted RBP11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ANGPTL2Q9UKU9 493 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ZNF490Q9ULM2 529 aaPredicted RBP11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 PCDHGA4Q9Y5G9 962 aa11.87□□□□□ -0.51
HLA-DQB1-203ENST00000399082 TRBC2A0A5B9 178 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 TMEM120BA0PK00 339 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 FITM1A5D6W6 292 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 UBFD1O14562 309 aaKnown RBP11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 CLGNO14967 610 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 POLR1CO15160 346 aaPredicted RBP11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 TBX6O95947 436 aaPredicted RBP11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 BPGMP07738 259 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ARRB2P32121 409 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 SERPINB4P48594 390 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 NAGLUP54802 743 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 EMP3P54852 163 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 RAB15P59190 212 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 IRF8Q02556 426 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 CHIT1Q13231 466 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 XKR6Q5GH73 641 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 ZC3H12BQ5HYM0 836 aaKnown RBP11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 LIPMQ5VYY2 423 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 PPP1R3BQ86XI6 285 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 DTWD1Q8N5C7 304 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 CCDC63Q8NA47 563 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 MFSD9Q8NBP5 474 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 SLC38A9Q8NBW4 561 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 NXPE2Q96DL1 559 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 TM4SF19Q96DZ7 209 aa11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 PTCD3Q96EY7 689 aaKnown RBP11.86□□□□□ -0.51
HLA-DQB1-203ENST00000399082 CDK15Q96Q40 435 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms