RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 FCRL1Q96LA6 429 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 ALPK1Q96QP1 1244 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 MTERF1Q99551 399 aaKnown RBP12.68□□□□□ -0.38
PRAME-201ENST00000398741 EMILIN2Q9BXX0 1053 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 BRD9Q9H8M2 597 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 TPT1P8Q9HAU6 139 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 FAM8A1Q9UBU6 413 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 B4GALT6Q9UBX8 382 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 RUVBL1Q9Y265 456 aaKnown RBP12.68□□□□□ -0.38
PRAME-201ENST00000398741 PPIL1Q9Y3C6 166 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 SCN8AQ9UQD0 1980 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 MRPS14O60783 128 aaKnown RBP12.68□□□□□ -0.38
PRAME-201ENST00000398741 ATP6V1G1O75348 118 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 URODP06132 367 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 HOXA9P31269 272 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 GRK3P35626 688 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 HPCAL1P37235 193 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 MASP1P48740 699 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 CCL23P55773 120 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 ZNF33BQ06732 778 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 VEZF1Q14119 521 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 SERPINA13PQ6UXR4 307 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 FAM43BQ6ZT52 329 aaPredicted RBP12.68□□□□□ -0.38
PRAME-201ENST00000398741 HTR3DQ70Z44 454 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 PRSS48Q7RTY5 328 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 DEFB128Q7Z7B8 93 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 IPCEF1Q8WWN9 437 aaPredicted RBP12.68□□□□□ -0.38
PRAME-201ENST00000398741 AUTS2Q8WXX7 1259 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 SH3KBP1Q96B97 665 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 RHNO1Q9BSD3 238 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 DUSP26Q9BV47 211 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 RUBCNLQ9H714 662 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 IL21Q9HBE4 155 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 ACOT13Q9NPJ3 140 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 SLC25A13Q9UJS0 675 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 PAIP2BQ9ULR5 123 aaKnown RBP12.68□□□□□ -0.38
PRAME-201ENST00000398741 PCDHB11Q9Y5F2 797 aa12.68□□□□□ -0.38
PRAME-201ENST00000398741 ZNF106Q9H2Y7 1883 aaKnown RBP12.67□□□□□ -0.38
PRAME-201ENST00000398741 UGDHO60701 494 aa12.67□□□□□ -0.38
PRAME-201ENST00000398741 SCN2BO60939 215 aa12.67□□□□□ -0.38
PRAME-201ENST00000398741 LAMP1P11279 417 aa12.67□□□□□ -0.38
PRAME-201ENST00000398741 EFNA1P20827 205 aaPredicted RBP12.67□□□□□ -0.38
PRAME-201ENST00000398741 TPP2P29144 1249 aaPredicted RBP12.67□□□□□ -0.38
PRAME-201ENST00000398741 KRT20P35900 424 aa12.67□□□□□ -0.38
PRAME-201ENST00000398741 NPRL3Q12980 569 aa12.67□□□□□ -0.38
PRAME-201ENST00000398741 KCNC3Q14003 757 aa12.67□□□□□ -0.38
PRAME-201ENST00000398741 OXA1LQ15070 435 aa12.67□□□□□ -0.38
PRAME-201ENST00000398741 PROX2Q3B8N5 592 aa12.67□□□□□ -0.38
PRAME-201ENST00000398741 PAGE2BQ5JRK9 111 aa12.67□□□□□ -0.38
PRAME-201ENST00000398741 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.67□□□□□ -0.389e-8■□□□□ 10.7
PRAME-201ENST00000398741 AHSA2Q719I0 299 aa12.67□□□□□ -0.38
PRAME-201ENST00000398741 THOC6Q86W42 341 aaKnown RBP12.67□□□□□ -0.38
PRAME-201ENST00000398741 PLD3Q8IV08 490 aa12.67□□□□□ -0.38
PRAME-201ENST00000398741 P3H2Q8IVL5 708 aa12.67□□□□□ -0.38
PRAME-201ENST00000398741 TCEAL8Q8IYN2 117 aa12.67□□□□□ -0.38
PRAME-201ENST00000398741 HS6ST3Q8IZP7 471 aa12.67□□□□□ -0.38
PRAME-201ENST00000398741 VPS37AQ8NEZ2 397 aa12.67□□□□□ -0.38
PRAME-201ENST00000398741 ASZ1Q8WWH4 475 aa12.67□□□□□ -0.38
PRAME-201ENST00000398741 ZNF300Q96RE9 604 aaPredicted RBP12.67□□□□□ -0.38
PRAME-201ENST00000398741 MROQ9BYG7 248 aa12.67□□□□□ -0.38
PRAME-201ENST00000398741 ADPRHL2Q9NX46 363 aa12.67□□□□□ -0.38
PRAME-201ENST00000398741 TMPRSS11EQ9UL52 423 aa12.67□□□□□ -0.38
PRAME-201ENST00000398741 FZD4Q9ULV1 537 aa12.67□□□□□ -0.38
PRAME-201ENST00000398741 CORO2BQ9UQ03 480 aa12.67□□□□□ -0.38
PRAME-201ENST00000398741 TMEM247A6NEH6 219 aa12.66□□□□□ -0.38
PRAME-201ENST00000398741 ZBBXA8MT70 800 aa12.66□□□□□ -0.38
PRAME-201ENST00000398741 SCAMP2O15127 329 aaKnown RBP12.66□□□□□ -0.38
PRAME-201ENST00000398741 SUV39H1O43463 412 aa12.66□□□□□ -0.38
PRAME-201ENST00000398741 PQBP1O60828 265 aaKnown RBP12.66□□□□□ -0.38
PRAME-201ENST00000398741 POP4O95707 220 aaKnown RBP12.66□□□□□ -0.38
PRAME-201ENST00000398741 MYCP01106 439 aaPredicted RBP12.66□□□□□ -0.38
PRAME-201ENST00000398741 EPHA2P29317 976 aa12.66□□□□□ -0.38
PRAME-201ENST00000398741 NCS1P62166 190 aa12.66□□□□□ -0.38
PRAME-201ENST00000398741 RPP38P78345 283 aaKnown RBP12.66□□□□□ -0.38
PRAME-201ENST00000398741 CAMK2GQ13555 558 aaPredicted RBP12.66□□□□□ -0.38
PRAME-201ENST00000398741 INAQ16352 499 aa12.66□□□□□ -0.38
PRAME-201ENST00000398741 CPTPQ5TA50 214 aa12.66□□□□□ -0.38
PRAME-201ENST00000398741 TMEM236Q5W0B7 351 aa12.66□□□□□ -0.38
PRAME-201ENST00000398741 DPY19L3Q6ZPD9 716 aa12.66□□□□□ -0.38
PRAME-201ENST00000398741 NEK10Q6ZWH5 1172 aa12.66□□□□□ -0.38
PRAME-201ENST00000398741 CMTM8Q8IZV2 173 aa12.66□□□□□ -0.38
PRAME-201ENST00000398741 SYNPOQ8N3V7 929 aa12.66□□□□□ -0.38
PRAME-201ENST00000398741 WDR20Q8TBZ3 569 aa12.66□□□□□ -0.38
PRAME-201ENST00000398741 CLP1Q92989 425 aaKnown RBP12.66□□□□□ -0.38
PRAME-201ENST00000398741 MED8Q96G25 268 aa12.66□□□□□ -0.38
PRAME-201ENST00000398741 NEURL2Q9BR09 285 aa12.66□□□□□ -0.38
PRAME-201ENST00000398741 SPATA9Q9BWV2 254 aa12.66□□□□□ -0.38
PRAME-201ENST00000398741 CPEB1Q9BZB8 566 aaKnown RBP12.66□□□□□ -0.38
PRAME-201ENST00000398741 EPS8L2Q9H6S3 715 aa12.66□□□□□ -0.38
PRAME-201ENST00000398741 ATAD3AQ9NVI7 634 aa12.66□□□□□ -0.38
PRAME-201ENST00000398741 E7EQ34 232 aa12.66□□□□□ -0.38
PRAME-201ENST00000398741 SERPINB7O75635 380 aa12.66□□□□□ -0.38
PRAME-201ENST00000398741 CD22P20273 847 aa12.66□□□□□ -0.38
PRAME-201ENST00000398741 PPIBP23284 216 aaKnown RBP12.66□□□□□ -0.38
PRAME-201ENST00000398741 ACVR2AP27037 513 aa12.66□□□□□ -0.38
PRAME-201ENST00000398741 POLR2LP62875 67 aaKnown RBP12.66□□□□□ -0.38
PRAME-201ENST00000398741 CREMQ03060 361 aa12.66□□□□□ -0.38
PRAME-201ENST00000398741 DOC2AQ14183 400 aa12.66□□□□□ -0.38
PRAME-201ENST00000398741 SF1Q15637 639 aaKnown RBP12.66□□□□□ -0.38
PRAME-201ENST00000398741 SYTL3Q4VX76 610 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms