RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 MFRPQ9BY79 579 aa12.77□□□□□ -0.37
VCX3A-202ENST00000398729 TRIM31Q9BZY9 425 aa12.77□□□□□ -0.37
VCX3A-202ENST00000398729 ZNF552Q9H707 407 aaPredicted RBP12.77□□□□□ -0.37
VCX3A-202ENST00000398729 TMEM184CQ9NVA4 438 aa12.77□□□□□ -0.37
VCX3A-202ENST00000398729 CUEDC1Q9NWM3 386 aaPredicted RBP12.77□□□□□ -0.37
VCX3A-202ENST00000398729 FBXL4Q9UKA2 621 aa12.77□□□□□ -0.37
VCX3A-202ENST00000398729 ADAMTS6Q9UKP5 1117 aa12.77□□□□□ -0.37
VCX3A-202ENST00000398729 HS3ST3B1Q9Y662 390 aa12.77□□□□□ -0.37
VCX3A-202ENST00000398729 TEX264Q9Y6I9 313 aa12.77□□□□□ -0.37
VCX3A-202ENST00000398729 MDC1Q14676 2089 aaKnown RBP12.77□□□□□ -0.37
VCX3A-202ENST00000398729 FBN2P35556 2912 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 ENO4A6NNW6 628 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 EFCAB8A8MWE9 144 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 H7BY64 318 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 MASP2O00187 686 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 NDC80O14777 642 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 HAT1O14929 419 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 ANXA5P08758 320 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 ITGA3P26006 1051 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 VARSP26640 1264 aaKnown RBP12.76□□□□□ -0.37
VCX3A-202ENST00000398729 KLC1Q07866 573 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 DSG2Q14126 1118 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 NDUFA9Q16795 377 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 EIF2S3LQ2VIR3 472 aaKnown RBP12.76□□□□□ -0.37
VCX3A-202ENST00000398729 TUBB8Q3ZCM7 444 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 HECTD2Q5U5R9 776 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 STEAP4Q687X5 459 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 FAM45BPQ6NSW5 357 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 TRMT10BQ6PF06 316 aaKnown RBP12.76□□□□□ -0.37
VCX3A-202ENST00000398729 AGTRAPQ6RW13 159 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 KIRREL2Q6UWL6 708 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 PRSS58Q8IYP2 241 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 FAM45AQ8TCE6 357 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 PRAP1Q96NZ9 151 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 YIPF2Q9BWQ6 316 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 DRC3Q9H069 523 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 SYNPO2LQ9H987 977 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 PLAC1Q9HBJ0 212 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 LUZP4Q9P127 313 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 SLC17A6Q9P2U8 582 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 TRPC4Q9UBN4 977 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 VWA7Q9Y334 891 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 APCP25054 2843 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 OTOGQ6ZRI0 2925 aa12.76□□□□□ -0.37
VCX3A-202ENST00000398729 IGLV3-12A0A075B6K2 115 aa12.75□□□□□ -0.37
VCX3A-202ENST00000398729 WIPF3A6NGB9 483 aa12.75□□□□□ -0.37
VCX3A-202ENST00000398729 CLDN1O95832 211 aa12.75□□□□□ -0.37
VCX3A-202ENST00000398729 CCND1P24385 295 aa12.75□□□□□ -0.37
VCX3A-202ENST00000398729 RPS15AP62244 130 aaKnown RBP12.75□□□□□ -0.37
VCX3A-202ENST00000398729 POLEQ07864 2286 aa12.75□□□□□ -0.37
VCX3A-202ENST00000398729 PDIA2Q13087 525 aaKnown RBP12.75□□□□□ -0.37
VCX3A-202ENST00000398729 NAE1Q13564 534 aa12.75□□□□□ -0.37
VCX3A-202ENST00000398729 FAM53BQ14153 422 aa12.75□□□□□ -0.37
VCX3A-202ENST00000398729 FRG1Q14331 258 aaKnown RBP12.75□□□□□ -0.37
VCX3A-202ENST00000398729 PHKG1Q16816 387 aa12.75□□□□□ -0.37
VCX3A-202ENST00000398729 VWA2Q5GFL6 755 aa12.75□□□□□ -0.37
VCX3A-202ENST00000398729 IGFL3Q6UXB1 125 aa12.75□□□□□ -0.37
VCX3A-202ENST00000398729 MBOAT1Q6ZNC8 495 aa12.75□□□□□ -0.37
VCX3A-202ENST00000398729 C17orf64Q86WR6 236 aa12.75□□□□□ -0.37
VCX3A-202ENST00000398729 PLD3Q8IV08 490 aa12.75□□□□□ -0.37
VCX3A-202ENST00000398729 ANKMY2Q8IV38 441 aa12.75□□□□□ -0.37
VCX3A-202ENST00000398729 ZADH2Q8N4Q0 377 aa12.75□□□□□ -0.37
VCX3A-202ENST00000398729 Q8NA96 180 aa12.75□□□□□ -0.37
VCX3A-202ENST00000398729 BBOF1Q8ND07 529 aa12.75□□□□□ -0.37
VCX3A-202ENST00000398729 OR11G2Q8NGC1 345 aa12.75□□□□□ -0.37
VCX3A-202ENST00000398729 ALKBH8Q96BT7 664 aaKnown RBP12.75□□□□□ -0.37
VCX3A-202ENST00000398729 MMABQ96EY8 250 aaPredicted RBP12.75□□□□□ -0.37
VCX3A-202ENST00000398729 KRT12Q99456 494 aa12.75□□□□□ -0.37
VCX3A-202ENST00000398729 WDR83Q9BRX9 315 aaKnown RBP12.75□□□□□ -0.37
VCX3A-202ENST00000398729 TRIM54Q9BYV2 358 aa12.75□□□□□ -0.37
VCX3A-202ENST00000398729 ATG10Q9H0Y0 220 aa12.75□□□□□ -0.37
VCX3A-202ENST00000398729 ZFATQ9P243 1243 aa12.75□□□□□ -0.37
VCX3A-202ENST00000398729 C3orf18Q9UK00 162 aa12.75□□□□□ -0.37
VCX3A-202ENST00000398729 B3GNT3Q9Y2A9 372 aa12.75□□□□□ -0.37
VCX3A-202ENST00000398729 A0A0A6YYC8 382 aaPredicted RBP12.74□□□□□ -0.37
VCX3A-202ENST00000398729 TCP11X1B4DZS4 312 aa12.74□□□□□ -0.37
VCX3A-202ENST00000398729 I3L1I5 382 aaPredicted RBP12.74□□□□□ -0.37
VCX3A-202ENST00000398729 MAP2K7O14733 419 aa12.74□□□□□ -0.37
VCX3A-202ENST00000398729 P2RX6O15547 441 aa12.74□□□□□ -0.37
VCX3A-202ENST00000398729 FOXS1O43638 330 aa12.74□□□□□ -0.37
VCX3A-202ENST00000398729 ALOX12BO75342 701 aa12.74□□□□□ -0.37
VCX3A-202ENST00000398729 TSPAN12O95859 305 aa12.74□□□□□ -0.37
VCX3A-202ENST00000398729 HPP00738 406 aa12.74□□□□□ -0.37
VCX3A-202ENST00000398729 ACPPP15309 386 aa12.74□□□□□ -0.37
VCX3A-202ENST00000398729 FDXRP22570 491 aa12.74□□□□□ -0.37
VCX3A-202ENST00000398729 DCTP40126 519 aa12.74□□□□□ -0.37
VCX3A-202ENST00000398729 SLC26A3P40879 764 aa12.74□□□□□ -0.37
VCX3A-202ENST00000398729 EMP2P54851 167 aa12.74□□□□□ -0.37
VCX3A-202ENST00000398729 AP1S2P56377 157 aa12.74□□□□□ -0.37
VCX3A-202ENST00000398729 MGAT5Q09328 741 aa12.74□□□□□ -0.37
VCX3A-202ENST00000398729 INPP5JQ15735 1006 aaPredicted RBP12.74□□□□□ -0.37
VCX3A-202ENST00000398729 AGAP7PQ5VUJ5 663 aa12.74□□□□□ -0.37
VCX3A-202ENST00000398729 CAPN13Q6MZZ7 669 aaPredicted RBP12.74□□□□□ -0.37
VCX3A-202ENST00000398729 LCTLQ6UWM7 567 aa12.74□□□□□ -0.37
VCX3A-202ENST00000398729 PARP9Q8IXQ6 854 aa12.74□□□□□ -0.37
VCX3A-202ENST00000398729 ARHGEF39Q8N4T4 335 aa12.74□□□□□ -0.37
VCX3A-202ENST00000398729 AMER3Q8N944 861 aa12.74□□□□□ -0.37
VCX3A-202ENST00000398729 FBXO36Q8NEA4 188 aa12.74□□□□□ -0.37
VCX3A-202ENST00000398729 THAP11Q96EK4 314 aa12.74□□□□□ -0.37
VCX3A-202ENST00000398729 AGAP4Q96P64 663 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms