RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 LRIG3Q6UXM1 1119 aa24.26■■□□□ 1.47
TMEM55B-202ENST00000398020 SLCO4C1Q6ZQN7 724 aa24.26■■□□□ 1.47
TMEM55B-202ENST00000398020 CLIP3Q96DZ5 547 aa24.26■■□□□ 1.47
TMEM55B-202ENST00000398020 SLC7A5P2Q9GIP4 190 aa24.26■■□□□ 1.47
TMEM55B-202ENST00000398020 ACTR5Q9H9F9 607 aaPredicted RBP24.26■■□□□ 1.47
TMEM55B-202ENST00000398020 PCDHB3Q9Y5E6 796 aa24.26■■□□□ 1.47
TMEM55B-202ENST00000398020 MAP1BP46821 2468 aaKnown RBP24.25■■□□□ 1.47
TMEM55B-202ENST00000398020 SRPX2O60687 465 aaPredicted RBP24.25■■□□□ 1.47
TMEM55B-202ENST00000398020 PRAMEF4O60810 478 aa24.25■■□□□ 1.47
TMEM55B-202ENST00000398020 CPNE3O75131 537 aaKnown RBP24.25■■□□□ 1.47
TMEM55B-202ENST00000398020 SPAG7O75391 227 aa24.25■■□□□ 1.47
TMEM55B-202ENST00000398020 ATXN8OSP0DMR3 200 aa24.25■■□□□ 1.47
TMEM55B-202ENST00000398020 LIPCP11150 499 aa24.25■■□□□ 1.47
TMEM55B-202ENST00000398020 GRK3P35626 688 aa24.25■■□□□ 1.47
TMEM55B-202ENST00000398020 PRAMEF9Q5VWM5 478 aa24.25■■□□□ 1.47
TMEM55B-202ENST00000398020 ZNF248Q8NDW4 579 aa24.25■■□□□ 1.47
TMEM55B-202ENST00000398020 RERGQ96A58 199 aaPredicted RBP24.25■■□□□ 1.47
TMEM55B-202ENST00000398020 ZNF285Q96NJ3 590 aa24.25■■□□□ 1.47
TMEM55B-202ENST00000398020 MACROD1Q9BQ69 325 aa24.25■■□□□ 1.47
TMEM55B-202ENST00000398020 PELI2Q9HAT8 420 aa24.25■■□□□ 1.47
TMEM55B-202ENST00000398020 GPRC5BQ9NZH0 403 aa24.25■■□□□ 1.47
TMEM55B-202ENST00000398020 GRID1Q9ULK0 1009 aa24.25■■□□□ 1.47
TMEM55B-202ENST00000398020 ANGPTL3Q9Y5C1 460 aa24.25■■□□□ 1.47
TMEM55B-202ENST00000398020 UQCRHLA0A096LP55 91 aa24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 TMEM8BA6NDV4 472 aa24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 IQCJ-SCHIP1C9J366 451 aaPredicted RBP24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 CLGNO14967 610 aa24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 OR1F1O43749 312 aa24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 UQCRHP07919 91 aa24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 RPS15AP62244 130 aaKnown RBP24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 PCBP2Q15366 365 aaKnown RBP eCLIP24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 HKDC1Q2TB90 917 aa24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 TCTE1Q5JU00 501 aa24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 DTX1Q86Y01 620 aa24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 BANPQ8N9N5 519 aa24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 KDF1Q8NAX2 398 aaPredicted RBP24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 KCNE4Q8WWG9 221 aa24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 APOPT1Q96IL0 206 aa24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 ACSS2Q9NR19 701 aa24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 ARGLU1Q9NWB6 273 aaPredicted RBP24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 DHCR7Q9UBM7 475 aaKnown RBP24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 TMCO1Q9UM00 188 aa24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 P2RX6O15547 441 aa24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 DLX3O60479 287 aa24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 RAD1O60671 282 aa24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 PROCP04070 461 aa24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 C1GALT1C1LP0DN25 315 aa24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 H2AFXP16104 143 aaPredicted RBP24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 EPB42P16452 691 aa24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 TAC1P20366 129 aa24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 EIF2S3P41091 472 aaKnown RBP24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 RELAQ04206 551 aa24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 CLN3Q13286 438 aa24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 XKR6Q5GH73 641 aa24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 TLDC1Q6P9B6 456 aa24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 C6orf15Q6UXA7 325 aaPredicted RBP24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 RPS27LQ71UM5 84 aaKnown RBP24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 NLGN4XQ8N0W4 816 aa24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 CSNK1A1LQ8N752 337 aa24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 NLGN4YQ8NFZ3 816 aaPredicted RBP24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 CAPS2Q9BXY5 557 aa24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 AKIRIN1Q9H9L7 192 aaPredicted RBP24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 GEMIN8Q9NWZ8 242 aaKnown RBP24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 PCDHGA4Q9Y5G9 962 aa24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 TNPO3Q9Y5L0 923 aaKnown RBP24.24■■□□□ 1.47
TMEM55B-202ENST00000398020 STX16-NPEPL1H3BU86 382 aa24.23■■□□□ 1.47
TMEM55B-202ENST00000398020 E2F3O00716 465 aa24.23■■□□□ 1.47
TMEM55B-202ENST00000398020 STX16O14662 325 aa24.23■■□□□ 1.47
TMEM55B-202ENST00000398020 PLIN3O60664 434 aa24.23■■□□□ 1.47
TMEM55B-202ENST00000398020 REEP5Q00765 189 aa24.23■■□□□ 1.47
TMEM55B-202ENST00000398020 GPS2Q13227 327 aa24.23■■□□□ 1.47
TMEM55B-202ENST00000398020 DOC2AQ14183 400 aa24.23■■□□□ 1.47
TMEM55B-202ENST00000398020 SLBPQ14493 270 aaKnown RBP eCLIP24.23■■□□□ 1.47
TMEM55B-202ENST00000398020 C1orf189Q5VU69 101 aa24.23■■□□□ 1.47
TMEM55B-202ENST00000398020 ATG9BQ674R7 924 aa24.23■■□□□ 1.47
TMEM55B-202ENST00000398020 GOLGA7Q7Z5G4 137 aa24.23■■□□□ 1.47
TMEM55B-202ENST00000398020 VN1R4Q7Z5H5 301 aa24.23■■□□□ 1.47
TMEM55B-202ENST00000398020 CCDC63Q8NA47 563 aa24.23■■□□□ 1.47
TMEM55B-202ENST00000398020 NKD1Q969G9 470 aa24.23■■□□□ 1.47
TMEM55B-202ENST00000398020 NSUN5Q96P11 429 aaKnown RBP24.23■■□□□ 1.47
TMEM55B-202ENST00000398020 SMC6Q96SB8 1091 aa24.23■■□□□ 1.47
TMEM55B-202ENST00000398020 AIF1LQ9BQI0 150 aa24.23■■□□□ 1.47
TMEM55B-202ENST00000398020 NDC1Q9BTX1 674 aa24.23■■□□□ 1.47
TMEM55B-202ENST00000398020 AP1M2Q9Y6Q5 423 aa24.23■■□□□ 1.47
TMEM55B-202ENST00000398020 URB1O60287 2271 aaKnown RBP24.22■■□□□ 1.47
TMEM55B-202ENST00000398020 KLK10O43240 276 aa24.22■■□□□ 1.47
TMEM55B-202ENST00000398020 CHIT1Q13231 466 aa24.22■■□□□ 1.47
TMEM55B-202ENST00000398020 GTF2H2Q13888 395 aa24.22■■□□□ 1.47
TMEM55B-202ENST00000398020 GRM7Q14831 915 aa24.22■■□□□ 1.47
TMEM55B-202ENST00000398020 RBBP5Q15291 538 aaKnown RBP24.22■■□□□ 1.47
TMEM55B-202ENST00000398020 GTF2H2CQ6P1K8 395 aa24.22■■□□□ 1.47
TMEM55B-202ENST00000398020 FAM199XQ6PEV8 388 aaPredicted RBP24.22■■□□□ 1.47
TMEM55B-202ENST00000398020 CACNA2D3Q8IZS8 1091 aa24.22■■□□□ 1.47
TMEM55B-202ENST00000398020 DTWD1Q8N5C7 304 aa24.22■■□□□ 1.47
TMEM55B-202ENST00000398020 MOCOSQ96EN8 888 aa24.22■■□□□ 1.47
TMEM55B-202ENST00000398020 IQCGQ9H095 443 aaKnown RBP24.22■■□□□ 1.47
TMEM55B-202ENST00000398020 PCTPQ9UKL6 214 aa24.22■■□□□ 1.47
TMEM55B-202ENST00000398020 RUVBL1Q9Y265 456 aaKnown RBP24.22■■□□□ 1.47
TMEM55B-202ENST00000398020 KCNE1BA0A087WTH5 132 aa24.21■■□□□ 1.47
TMEM55B-202ENST00000398020 TRBC2A0A5B9 178 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms