RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 PPCDCQ96CD2 204 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 ZNF641Q96N77 438 aaPredicted RBP10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 RETREG1Q9H6L5 497 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 DEC1Q9P2X7 70 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 BTBD3Q9Y2F9 522 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 TRIM43BA6NCK2 446 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 PDZK1P1A8MUH7 402 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 H3BMQ9 156 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 ZSCAN9O15535 394 aaPredicted RBP10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 GREM1O60565 184 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 BMP10O95393 424 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 ETHE1O95571 254 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 NPPAP01160 153 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 VIPP01282 170 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 CBSLP0DN79 551 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 ALPPL2P10696 532 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 JUPP14923 745 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 ACPPP15309 386 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 CBSP35520 551 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 TBPL1P62380 186 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 TUBA4AP68366 448 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 ABHD18Q0P651 414 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 TP53BP2Q13625 1128 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 CEP68Q76N32 757 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 DDHD1Q8NEL9 900 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 VANGL1Q8TAA9 524 aaPredicted RBP10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 CIDECQ96AQ7 238 aaPredicted RBP10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 TRIM43Q96BQ3 446 aaPredicted RBP10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 COG8Q96MW5 612 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 CHCHD3Q9NX63 227 aaKnown RBP10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 ERVK-18Q9QC07 812 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 TMPRSS11EQ9UL52 423 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 RUVBL1Q9Y265 456 aaKnown RBP10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 HS3ST2Q9Y278 367 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 RANBP2P49792 3224 aaKnown RBP10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 TRPM7Q96QT4 1865 aa10.09□□□□□ -0.79
CPSF1P1-201ENST00000397477 A0A096LPI6 279 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 AREL1O15033 823 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 PRAMEF4O60810 478 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 LATS1O95835 1130 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 CEBPBP17676 345 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 RRM2P31350 389 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 KDELR2P33947 212 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 CCR3P51677 355 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 PLA2G16P53816 162 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 AP1S2P56377 157 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 HSPB3Q12988 150 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 DHCR24Q15392 516 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 ZXDCQ2QGD7 858 aaPredicted RBP10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 PRAMEF9Q5VWM5 478 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 PARS2Q7L3T8 475 aaKnown RBP10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 HIPK1Q86Z02 1210 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 SNX29P2Q8IUI4 249 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 CHPFQ8IZ52 775 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 NAGSQ8N159 534 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 CBARPQ8N350 705 aaPredicted RBP10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 OR7G3Q8NG95 312 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 FAM81AQ8TBF8 368 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 BPIFB1Q8TDL5 484 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 BTN2A2Q8WVV5 523 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 EXOSC8Q96B26 276 aaKnown RBP10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 CCM2Q9BSQ5 444 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 AMBRA1Q9C0C7 1298 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 EXOSC4Q9NPD3 245 aaKnown RBP10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 DCAF13Q9NV06 445 aaKnown RBP10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 IMP3Q9NV31 184 aaKnown RBP10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 RPS6KA6Q9UK32 745 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 OGDHLQ9ULD0 1010 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 M0QX08 132 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 ADH5P11766 374 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 PFN3P60673 137 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 FPGSQ05932 587 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 MESP2Q0VG99 397 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 CNTN1Q12860 1018 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 NR1D2Q14995 579 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 NPTX1Q15818 432 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 VMACQ2NL98 169 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 ZNF805Q5CZA5 627 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 RHNO1Q9BSD3 238 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 ZSCAN5AQ9BUG6 496 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 RAD21L1Q9H4I0 556 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 ZNF556Q9HAH1 456 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 TBC1D14Q9P2M4 693 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 GLOD5A6NK44 160 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 GABRR3A8MPY1 467 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 ERAL1O75616 437 aaKnown RBP10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 PIM1P11309 404 aaPredicted RBP10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 EPHA2P29317 976 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 VLDLRP98155 873 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 SRSF11Q05519 484 aaKnown RBP10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 UGT8Q16880 541 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 PLEKHS1Q5SXH7 462 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 ZNF773Q6PK81 442 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 TRIM46Q7Z4K8 759 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 ADIPOR2Q86V24 386 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 TMC8Q8IU68 726 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 SFTPA1Q8IWL2 248 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 ZCCHC7Q8N3Z6 543 aaKnown RBP10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 NFKBIDQ8NI38 313 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms