RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 PADI2Q9Y2J8 665 aa13.14□□□□□ -0.31
SEC13-205ENST00000397101 COPG1Q9Y678 874 aaKnown RBP13.14□□□□□ -0.31
SEC13-205ENST00000397101 CELSR1Q9NYQ6 3014 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 KLHL33A6NCF5 533 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 A6NL46 340 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 GLRA3O75311 464 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 CBSLP0DN79 551 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 COL6A2P12110 1019 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 PRF1P14222 555 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 ZNF37AP17032 561 aaPredicted RBP13.13□□□□□ -0.31
SEC13-205ENST00000397101 CBSP35520 551 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 GMPRP36959 345 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 MAGEA12P43365 314 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 PREPP48147 710 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 GLRBP48167 497 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 TIAL1Q01085 375 aaKnown RBP eCLIP13.13□□□□□ -0.31
SEC13-205ENST00000397101 ABRQ12979 859 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 ZRSR2Q15696 482 aaKnown RBP13.13□□□□□ -0.31
SEC13-205ENST00000397101 GPR19Q15760 415 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 TSNAXIP1Q2TAA8 658 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 LCN10Q6JVE6 187 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 LRRC8EQ6NSJ5 796 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 SPNS2Q8IVW8 549 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 SYTL1Q8IYJ3 562 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 ANKRD42Q8N9B4 389 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 GIMAP7Q8NHV1 300 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 ISL2Q96A47 359 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 NXNL1Q96CM4 212 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 TLCD1Q96CP7 247 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 APOPT1Q96IL0 206 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 FOPNLQ96NB1 174 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 C17orf62Q9BQA9 187 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 NMRAL1Q9HBL8 299 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 MED16Q9Y2X0 877 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 PCDHGA10Q9Y5H3 936 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 ACTL7BQ9Y614 415 aa13.13□□□□□ -0.31
SEC13-205ENST00000397101 MATN2O00339 956 aa13.12□□□□□ -0.31
SEC13-205ENST00000397101 IFRD1O00458 451 aaPredicted RBP13.12□□□□□ -0.31
SEC13-205ENST00000397101 KLHL2O95198 593 aa13.12□□□□□ -0.31
SEC13-205ENST00000397101 GSTA1P08263 222 aa13.12□□□□□ -0.31
SEC13-205ENST00000397101 CD63P08962 238 aa13.12□□□□□ -0.31
SEC13-205ENST00000397101 HBQ1P09105 142 aa13.12□□□□□ -0.31
SEC13-205ENST00000397101 SLC35G4P0C7Q5 338 aa13.12□□□□□ -0.31
SEC13-205ENST00000397101 ENO3P13929 434 aaPredicted RBP13.12□□□□□ -0.31
SEC13-205ENST00000397101 CREB1P16220 341 aa13.12□□□□□ -0.31
SEC13-205ENST00000397101 SLC26A3P40879 764 aa13.12□□□□□ -0.31
SEC13-205ENST00000397101 CCNFP41002 786 aa13.12□□□□□ -0.31
SEC13-205ENST00000397101 ATP6V0D1P61421 351 aa13.12□□□□□ -0.31
SEC13-205ENST00000397101 SLC18A2Q05940 514 aa13.12□□□□□ -0.31
SEC13-205ENST00000397101 ATP1A4Q13733 1029 aa13.12□□□□□ -0.31
SEC13-205ENST00000397101 SSPNQ14714 243 aa13.12□□□□□ -0.31
SEC13-205ENST00000397101 TMEM207Q6UWW9 146 aa13.12□□□□□ -0.31
SEC13-205ENST00000397101 LILRA3Q8N6C8 439 aaPredicted RBP13.12□□□□□ -0.31
SEC13-205ENST00000397101 ANKRD49Q8WVL7 239 aa13.12□□□□□ -0.31
SEC13-205ENST00000397101 ILKAPQ9H0C8 392 aaPredicted RBP13.12□□□□□ -0.31
SEC13-205ENST00000397101 ZNF552Q9H707 407 aaPredicted RBP13.12□□□□□ -0.31
SEC13-205ENST00000397101 C1GALT1Q9NS00 363 aa13.12□□□□□ -0.31
SEC13-205ENST00000397101 NKIRAS1Q9NYS0 192 aa13.12□□□□□ -0.31
SEC13-205ENST00000397101 ACSL5Q9ULC5 683 aa13.12□□□□□ -0.31
SEC13-205ENST00000397101 GRID1Q9ULK0 1009 aa13.12□□□□□ -0.31
SEC13-205ENST00000397101 PSMD13Q9UNM6 376 aa13.12□□□□□ -0.31
SEC13-205ENST00000397101 POLQO75417 2590 aa13.11□□□□□ -0.31
SEC13-205ENST00000397101 SLC5A10A0PJK1 596 aa13.11□□□□□ -0.31
SEC13-205ENST00000397101 C9J4A7 227 aa13.11□□□□□ -0.31
SEC13-205ENST00000397101 BTN3A1O00481 513 aa13.11□□□□□ -0.31
SEC13-205ENST00000397101 MPC1LP0DKB6 136 aa13.11□□□□□ -0.31
SEC13-205ENST00000397101 MTHFD1P11586 935 aaKnown RBP13.11□□□□□ -0.31
SEC13-205ENST00000397101 TFEBP19484 476 aa13.11□□□□□ -0.31
SEC13-205ENST00000397101 GRNP28799 593 aaKnown RBP13.11□□□□□ -0.31
SEC13-205ENST00000397101 RPA4Q13156 261 aa13.11□□□□□ -0.31
SEC13-205ENST00000397101 KRT33BQ14525 404 aa13.11□□□□□ -0.31
SEC13-205ENST00000397101 TNFAIP8L3Q5GJ75 292 aa13.11□□□□□ -0.31
SEC13-205ENST00000397101 DCAF10Q5QP82 559 aa13.11□□□□□ -0.31
SEC13-205ENST00000397101 METRNLQ641Q3 311 aa13.11□□□□□ -0.31
SEC13-205ENST00000397101 ZNF385CQ66K41 422 aaPredicted RBP13.11□□□□□ -0.31
SEC13-205ENST00000397101 FAM83HQ6ZRV2 1179 aaPredicted RBP13.11□□□□□ -0.31
SEC13-205ENST00000397101 FRA10AC1Q70Z53 315 aa13.11□□□□□ -0.31
SEC13-205ENST00000397101 PIWIL4Q7Z3Z4 852 aaKnown RBP13.11□□□□□ -0.31
SEC13-205ENST00000397101 MRGPREQ86SM8 312 aa13.11□□□□□ -0.31
SEC13-205ENST00000397101 VRK3Q8IV63 474 aa13.11□□□□□ -0.31
SEC13-205ENST00000397101 PLD6Q8N2A8 252 aaKnown RBP13.11□□□□□ -0.31
SEC13-205ENST00000397101 GALNT16Q8N428 558 aa13.11□□□□□ -0.31
SEC13-205ENST00000397101 BANPQ8N9N5 519 aa13.11□□□□□ -0.31
SEC13-205ENST00000397101 CLEC1AQ8NC01 280 aa13.11□□□□□ -0.31
SEC13-205ENST00000397101 MGARPQ8TDB4 240 aa13.11□□□□□ -0.31
SEC13-205ENST00000397101 EXT2Q93063 718 aa13.11□□□□□ -0.31
SEC13-205ENST00000397101 CLIP3Q96DZ5 547 aa13.11□□□□□ -0.31
SEC13-205ENST00000397101 PAIP2Q9BPZ3 127 aaKnown RBP13.11□□□□□ -0.31
SEC13-205ENST00000397101 DERL2Q9GZP9 239 aa13.11□□□□□ -0.31
SEC13-205ENST00000397101 WWP1Q9H0M0 922 aa13.11□□□□□ -0.31
SEC13-205ENST00000397101 ACTR5Q9H9F9 607 aaPredicted RBP13.11□□□□□ -0.31
SEC13-205ENST00000397101 ZNF358Q9NW07 568 aa13.11□□□□□ -0.31
SEC13-205ENST00000397101 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.11□□□□□ -0.31
SEC13-205ENST00000397101 RNF112Q9ULX5 631 aa13.11□□□□□ -0.31
SEC13-205ENST00000397101 SEC16AO15027 2179 aa13.11□□□□□ -0.31
SEC13-205ENST00000397101 NPEPPSL1A6NEC2 478 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 H3BQF6 201 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 EIF3FO00303 357 aaPredicted RBP13.1□□□□□ -0.31
SEC13-205ENST00000397101 LRRTM2O43300 516 aa13.1□□□□□ -0.31
SEC13-205ENST00000397101 GPC4O75487 556 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms